| Literature DB >> 26911286 |
Abstract
Protein glycosylation is an essential co- and post-translational modification of secretory and membrane proteins in all eukaryotes. The initial steps of N-glycosylation and N-glycan processing are highly conserved between plants, mammals and yeast. In contrast, late N-glycan maturation steps in the Golgi differ significantly in plants giving rise to complex N-glycans with β1,2-linked xylose, core α1,3-linked fucose and Lewis A-type structures. While the essential role of N-glycan modifications on distinct mammalian glycoproteins is already well documented, we have only begun to decipher the biological function of this ubiquitous protein modification in different plant species. In this review, I focus on the biosynthesis and function of different protein N-linked glycans in plants. Special emphasis is given on glycan-mediated quality control processes in the ER and on the biological role of characteristic complex N-glycan structures.Entities:
Keywords: Golgi apparatus; N-glycan processing; N-glycosylation; endoplasmic reticulum; glycosyltransferase
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Year: 2016 PMID: 26911286 PMCID: PMC5045529 DOI: 10.1093/glycob/cww023
Source DB: PubMed Journal: Glycobiology ISSN: 0959-6658 Impact factor: 4.313
Fig. 1.Comparison of different types of protein linked glycans. (A) Typical N-glycan structures from mammals, plants, insects and yeast (S. cerevisiae) are shown. The symbols for the monosaccharides in the illustration are drawn according to the nomenclature from the Consortium for Functional Glycomics. (B) Schematic representation of characteristic O-glycans from mammals (di-sialylated core 1), plants (extensin-type modification on Ser and contiguous hydroxyproline (Hyp) residues, the structure is drawn according to Nguema-Ona et al. 2014) and S. cerevisiae. The carbohydrate structure of an A. thaliana arabinogalactan-protein is not shown here and can be found in Tryfona et al. (2012). (C) The conserved core glycan structure of the GPI-anchor is shown as well as examples derived from a human GPI-anchored protein (Kinoshita 2014) and from pear cells (Oxley and Bacic 1999). P-Et indicates the phsphoethanolamine linkage. This figure is available in black and white in print and in color at Glycobiology online.
Fig. 2.(A) ALG proteins involved in lipid-linked oligosaccharide precursor biosynthesis. Genetic evidence for their function has been shown for the A. thaliana glycosyltransferases highlighted in a different color. (A), (B) and (C) define the different branches of the oligosaccharide. (B) Illustration of the putative plant OST complex consisting of different subunits. The proposed topology of the enzymes is depicted. Please note that for some proteins like STT3A/STT3B the exact number of transmembrane domains is unclear (Koiwa et al. 2003) and may range from 10 to 14 helices. The different colors of the transmembrane domains denote subcomplexes that have been described for the yeast and mammalian OST complex (Kelleher and Gilmore 2006). This figure is available in black and white in print and in color at Glycobiology online.
Putative subunits of the A. thaliana OST complex
| Locus | Amino acid identity in % to the yeast subunit | Reference | ||
|---|---|---|---|---|
| DGL1 | At5g66680 | Wbp1p | 25 | |
| STT3A | At5g19690 | Stt3p | 47 | |
| OST1A | At2g01720 | Ost1p | 23 | |
| HAP6 | At4g21150 | Swp1p | 25 | |
| DAD1 | At1g32210 | Ost2p | 36 | |
| OST4A | At3g12587 | Ost4p | 31 | |
| OST3/6 | At1g61790 | Ost3p/Ost6p | <17 |
No homolog of the yeast Ost5p subunit has been identified in the A. thaliana genome. The amino acid identity between DAD1 and DAD2 is ∼95% and OST4A/OST4B share ∼88% identity. In contrast, the amino acid identity of OST1A and OST1B to each other is <50%, suggesting that they represent two OST1 isoforms with little or only partially overlapping function.
Fig. 3.N-Glycan processing and N-glycan-mediated quality control in the ER of plants. The OST complex transfers the assembled N-glycan precursor to accessible Asn residues within the glycosylation consensus sites of nascent polypeptides. The first N-glycan processing step is carried out by α-glucosidase I (GCSI). Upon trimming of another terminal Glc residue by GCSII, the protein with a mono-glucosylated N-glycan may enter the calnexin (CNX)/calreticulin cycle. Proper folded glycoproteins are released from the quality control process and can exit the ER. Aberrant glycoproteins that cannot attain their final conformation are sent for degradation by the ERAD pathway which requires MNS4/MNS5-mediated Man trimming and recognition by OS9. The class I α-mannosidase MNS3 hydrolyses a single α1,2-Man residue from the middle branch (B-branch see also Figure 2A) of the oligomannosidic N-glycan. MNS3 may act on folded as well as on partially folded glycoproteins. The subcellular site of MNS3 action is still obscure. While MNS3 has so far been exclusively found in Golgi-like structures (Liebminger et al. 2009), ER-resident glycoproteins display N-glycans that have been trimmed by the MNS3-like ER-α-mannosidase activity. This figure is available in black and white in print and in color at Glycobiology online.
Overview of plant N-glycan processing mutants and their phenotypes
| Protein | Locus | Mutant | Phenotype | Reference |
|---|---|---|---|---|
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| GCSII α | At5g63840 | Hypomorphic allele, temperature-sensitive root growth phenotype | ||
| GCSII β | At5g56360 | Impaired plant immunity against bacteria, defect in EFR biogenesis, altered plant immunity | ||
| MNS3 | At1g30000 | Enhanced growth phenotype in the | ||
| MNS1 | At1g51590 | Double mutant displays a conditional root phenotype; severe growth defect in the | ||
| GnTI | At4g38240 | Increased sensitivity towards salt stress, enhanced growth phenotype in the |
aFor conserved enzymes, abbreviations according to the Human Genome Nomenclature Committee are given in parentheses.
brsw2-1 is a partial loss-of-function mutant of KORRIGAN1.
Fig. 4.(A) Complex N-glycan formation in the Golgi apparatus. Terminal Man residues are removed by class I α-mannosidases (MNS1-3). Man5GlcNAc2 is used by β1,2-N-acetylglucosaminyltransferase I (GnTI, highlighted in bold) to initiate complex N-glycan formation. The different N-glycan processing enzymes required for the maturation of complex N-glycans in the Golgi are shown. Note, possible cargo transport processes mediated by cisternal maturation, vesicular transport or tubular connections are not indicated. Dependent on the mode of cargo transport there are differences in localization and retention of glycosylation enzymes. (B) Schematic illustration of a Golgi-resident N-glycan processing enzyme. The structure of the catalytic domain from rabbit GnTI (Unligil et al. 2000) is illustrated with N-terminal regions representing the short cytoplasmic tail, the single transmembrane domain and the stem region. (C) Golgi-resident glycosyltransferases may form homomeric or heteromeric complexes that could be important for concentration of the enzymes in different Golgi cisternae and/or for the modulation of their enzymatic activities. The arrow indicates that tobacco GnTI interacts through its stem region (Schoberer et al. 2014). This figure is available in black and white in print and in color at Glycobiology online.