Literature DB >> 26910457

Methylation profiling by bisulfite sequencing analysis of the mtDNA Non-Coding Region in replicative and senescent Endothelial Cells.

Valentina Bianchessi1, Maria Cristina Vinci2, Patrizia Nigro1, Valeria Rizzi3, Floriana Farina1, Maurizio C Capogrossi4, Giulio Pompilio1, Valentina Gualdi3, Andrea Lauri5.   

Abstract

The regulation and function of Mitochondrial DNA (mtDNA) cytosine methylation (5 mC) are largely unexplored. Mitochondria, Endothelial Cell (EC) senescence, and cardiovascular dysfunction are closely related. We extensively investigated the mtDNA Non-Coding Region (NCR) methylation pattern and its variations in EC replicative senescence. We observed previously undescribed 5 mC clusters and a biased distribution of 5 mC among DNA sites and throughout the NCR. The methylation pattern in senescent EC showed non-random variations, including the hypo-methylation of mtDNA replication regulatory sites. Additional experiments opened to a possible role for 5 mC in D-loop formation, rather than in mitochondrial gene expression.
Copyright © 2016 Elsevier B.V. and Mitochondria Research Society. All rights reserved.

Entities:  

Keywords:  Bisulfite sequencing; D-loop; Endothelial Cell; Methylation; Senescence; mtDNA

Mesh:

Substances:

Year:  2016        PMID: 26910457     DOI: 10.1016/j.mito.2016.02.004

Source DB:  PubMed          Journal:  Mitochondrion        ISSN: 1567-7249            Impact factor:   4.160


  25 in total

1.  Cytosine methylation of mitochondrial DNA at CpG sequences impacts transcription factor A DNA binding and transcription.

Authors:  Vishantie Dostal; Mair E A Churchill
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-02-23       Impact factor: 4.490

Review 2.  Epigenetic regulation in cell senescence.

Authors:  Li-Qin Cheng; Zhu-Qin Zhang; Hou-Zao Chen; De-Pei Liu
Journal:  J Mol Med (Berl)       Date:  2017-09-08       Impact factor: 4.599

3.  Mitochondrial genome undergoes de novo DNA methylation that protects mtDNA against oxidative damage during the peri-implantation window.

Authors:  Yuan Yue; Likun Ren; Chao Zhang; Kai Miao; Kun Tan; Qianying Yang; Yupei Hu; Guangyin Xi; Gang Luo; Mingyao Yang; Jingyu Zhang; Zhuocheng Hou; Lei An; Jianhui Tian
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-18       Impact factor: 12.779

4.  No evidence of extensive non-CpG methylation in mtDNA.

Authors:  Romain Guitton; Gonzalo S Nido; Charalampos Tzoulis
Journal:  Nucleic Acids Res       Date:  2022-08-18       Impact factor: 19.160

5.  Increase in Mitochondrial D-Loop Region Methylation Levels in Mild Cognitive Impairment Individuals.

Authors:  Andrea Stoccoro; Filippo Baldacci; Roberto Ceravolo; Linda Giampietri; Gloria Tognoni; Gabriele Siciliano; Lucia Migliore; Fabio Coppedè
Journal:  Int J Mol Sci       Date:  2022-05-12       Impact factor: 6.208

Review 6.  Mitochondrial DNA Methylation and Human Diseases.

Authors:  Andrea Stoccoro; Fabio Coppedè
Journal:  Int J Mol Sci       Date:  2021-04-27       Impact factor: 5.923

7.  Evidence Suggesting Absence of Mitochondrial DNA Methylation.

Authors:  Mie Mechta; Lars R Ingerslev; Odile Fabre; Martin Picard; Romain Barrès
Journal:  Front Genet       Date:  2017-11-01       Impact factor: 4.599

8.  Mitochondrial D-Loop Region Methylation and Copy Number in Peripheral Blood DNA of Parkinson's Disease Patients.

Authors:  Andrea Stoccoro; Adam R Smith; Filippo Baldacci; Claudia Del Gamba; Annalisa Lo Gerfo; Roberto Ceravolo; Katie Lunnon; Lucia Migliore; Fabio Coppedè
Journal:  Genes (Basel)       Date:  2021-05-12       Impact factor: 4.096

9.  Maternal smoking during pregnancy is associated with mitochondrial DNA methylation.

Authors:  David A Armstrong; Benjamin B Green; Bailey A Blair; Dylan J Guerin; Julia F Litzky; Niraj R Chavan; Kevin J Pearson; Carmen J Marsit
Journal:  Environ Epigenet       Date:  2016-10-20

Review 10.  Inflammation, epigenetics, and metabolism converge to cell senescence and ageing: the regulation and intervention.

Authors:  Xudong Zhu; Zhiyang Chen; Weiyan Shen; Gang Huang; John M Sedivy; Hu Wang; Zhenyu Ju
Journal:  Signal Transduct Target Ther       Date:  2021-06-28
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