Literature DB >> 26908372

The historical biogeography of groupers: Clade diversification patterns and processes.

Ka Yan Ma1, Matthew Thomas Craig2, John Howard Choat3, Lynne van Herwerden4.   

Abstract

Groupers (family Epinephelidae) are a clade of species-rich, biologically diverse reef fishes. Given their ecological variability and widespread distribution across ocean basins, it is important to scrutinize their evolutionary history that underlies present day distributions. This study investigated the patterns and processes by which grouper biodiversity has been generated and what factors have influenced their present day distributions. We reconstructed a robust, time-calibrated molecular phylogeny of Epinephelidae with comprehensive (∼87%) species sampling, whereby diversification rates were estimated and ancestral ranges were reconstructed. Our results indicate that groupers originated in what is now the East Atlantic during the mid-Eocene and diverged successively to form six strongly supported main clades. These clades differ in age (late Oligocene to mid-Miocene), geographic origin (West Atlantic to West Indo-Pacific) and temporal-spatial diversification pattern, ranging from constant rates of diversification to episodes of rapid radiation. Overall, divergence within certain biogeographic regions was most prevalent in groupers, while vicariant divergences were more common in Tropical Atlantic and East Pacific groupers. Our findings reveal that both biological and geographical factors have driven grouper diversification. They also underscore the importance of scrutinizing group-specific patterns to better understand reef fish evolution.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Ancestral range reconstruction; Climate change cycles; Geological history; Historical biogeography; Molecular dating; Reef fishes

Mesh:

Year:  2016        PMID: 26908372     DOI: 10.1016/j.ympev.2016.02.012

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  7 in total

1.  Phylogenetic classification of bony fishes.

Authors:  Ricardo Betancur-R; Edward O Wiley; Gloria Arratia; Arturo Acero; Nicolas Bailly; Masaki Miya; Guillaume Lecointre; Guillermo Ortí
Journal:  BMC Evol Biol       Date:  2017-07-06       Impact factor: 3.260

2.  Selection and evaluation of new reference genes for RT-qPCR analysis in Epinephelus akaara based on transcriptome data.

Authors:  Huan Wang; Xiang Zhang; Qiaohong Liu; Xiaochun Liu; Shaoxiong Ding
Journal:  PLoS One       Date:  2017-02-09       Impact factor: 3.240

3.  Comprehensive species set revealing the phylogeny and biogeography of Feliformia (Mammalia, Carnivora) based on mitochondrial DNA.

Authors:  Yu Zhou; Si-Rui Wang; Jian-Zhang Ma
Journal:  PLoS One       Date:  2017-03-30       Impact factor: 3.240

4.  Contrasting population genetic structure in three aggregating groupers (Percoidei: Epinephelidae) in the Indo-West Pacific: the importance of reproductive mode.

Authors:  Ka Yan Ma; Lynne van Herwerden; Stephen J Newman; Michael L Berumen; John Howard Choat; Ka Hou Chu; Yvonne Sadovy de Mitcheson
Journal:  BMC Evol Biol       Date:  2018-12-04       Impact factor: 3.260

5.  Testicular inducing steroidogenic cells trigger sex change in groupers.

Authors:  Ryosuke Murata; Ryo Nozu; Yuji Mushirobira; Takafumi Amagai; Jun Fushimi; Yasuhisa Kobayashi; Kiyoshi Soyano; Yoshitaka Nagahama; Masaru Nakamura
Journal:  Sci Rep       Date:  2021-05-27       Impact factor: 4.379

6.  Whole-genome sequencing of leopard coral grouper ( Plectropomus leopardus) and exploration of regulation mechanism of skin color and adaptive evolution.

Authors:  Yang Yang; Li-Na Wu; Jing-Fang Chen; Xi Wu; Jun-Hong Xia; Zi-Ning Meng; Xiao-Chun Liu; Hao-Ran Lin
Journal:  Zool Res       Date:  2020-05-18

7.  Chromosome Genome Assembly of Cromileptes altivelis Reveals Loss of Genome Fragment in Cromileptes Compared with Epinephelus Species.

Authors:  Yang Yang; Lina Wu; Zhuoying Weng; Xi Wu; Xi Wang; Junhong Xia; Zining Meng; Xiaochun Liu
Journal:  Genes (Basel)       Date:  2021-11-24       Impact factor: 4.096

  7 in total

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