Literature DB >> 26907558

Role of F357 as an Oxygen Gate in the Oxidative Half-Reaction of Choline Oxidase.

Francesca Salvi1, Isela Rodriguez1, Donald Hamelberg1, Giovanni Gadda1.   

Abstract

Choline oxidase from Arthrobacter globiformis catalyzes the oxidation of choline to glycine betaine by using oxygen as an electron acceptor. A partially rate limiting isomerization of the reduced wild-type enzyme during the reaction with oxygen was previously detected using solvent viscosity effects. In this study, we hypothesized that the side chains of M62 and F357, located at the entrance to the active site of choline oxidase, may be related to the slow isomerization detected. We engineered a double-variant enzyme M62A/F357A. The kinetic characterization of the double-variant enzyme showed a lack of the isomerization detected in wild-type choline oxidase, and a lack of saturation with an oxygen concentration as high as 1 mM, while most other kinetic parameters were similar to those of wild-type choline oxidase. The kinetic characterization of the single-variant enzymes established that only the side chain of F357 plays a role in the isomerization of choline oxidase in the oxidative half-reaction. Molecular dynamics studies suggest that the slow isomerization related to F357 is possibly due to the participation of the phenyl ring in a newly proposed gating mechanism for a narrow tunnel, assumed to regulate the access of oxygen to the reduced cofactor.

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Year:  2016        PMID: 26907558     DOI: 10.1021/acs.biochem.5b01356

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  2 in total

1.  Steric hindrance controls pyridine nucleotide specificity of a flavin-dependent NADH:quinone oxidoreductase.

Authors:  Jacob Ball; Renata A G Reis; Johnson Agniswamy; Irene T Weber; Giovanni Gadda
Journal:  Protein Sci       Date:  2018-10-31       Impact factor: 6.725

Review 2.  Alteration of Electron Acceptor Preferences in the Oxidative Half-Reaction of Flavin-Dependent Oxidases and Dehydrogenases.

Authors:  Kentaro Hiraka; Wakako Tsugawa; Koji Sode
Journal:  Int J Mol Sci       Date:  2020-05-27       Impact factor: 5.923

  2 in total

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