Literature DB >> 26902931

Insights into the gate of the nuclear pore complex.

Monika Zwerger1, Matthias Eibauer1, Ohad Medalia1,2.   

Abstract

Nuclear pore complexes (NPCs) serve as the gateway of the cell nucleus. These macromolecular assemblies form selective aqueous translocation channels permitting the free diffusion of small molecules, as well as receptor-mediated transport of large cargoes. Over the past decade, major progress has been made in both the structural determination of individual nucleoporins and subcomplexes by X-ray crystallography and in the structural analysis of the entire NPC by cryo-electron tomography (cryo-ET). The metazoan NPC structure from Xenopus laevis oocytes was recently resolved up to 20 Å by combining cryo-ET with advanced image processing techniques, revealing for the first time the architecture of the central channel. Here, we discuss the structure of the Xenopus laevis NPC and consider future perspectives that will eventually allow reconstructing the scaffold and gate of the NPC with higher resolution and identifying its transport-relevant regions. This will eventually allow us to describe the structure of the NPC 'in action'.

Entities:  

Keywords:  Cryo-electron tomography; FG-repeat domains; Xenopus laevis; nuclear pore complex; nucleoporins; oocytes

Mesh:

Substances:

Year:  2016        PMID: 26902931      PMCID: PMC4916872          DOI: 10.1080/19491034.2015.1130197

Source DB:  PubMed          Journal:  Nucleus        ISSN: 1949-1034            Impact factor:   4.197


  36 in total

1.  Kinetic analysis of translocation through nuclear pore complexes.

Authors:  K Ribbeck; D Görlich
Journal:  EMBO J       Date:  2001-03-15       Impact factor: 11.598

Review 2.  Transport into and out of the nucleus.

Authors:  I G Macara
Journal:  Microbiol Mol Biol Rev       Date:  2001-12       Impact factor: 11.056

3.  Imaging of single-molecule translocation through nuclear pore complexes.

Authors:  Weidong Yang; Jeff Gelles; Siegfried M Musser
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-11       Impact factor: 11.205

Review 4.  Functional architecture of the nuclear pore complex.

Authors:  Einat Grossman; Ohad Medalia; Monika Zwerger
Journal:  Annu Rev Biophys       Date:  2012       Impact factor: 12.981

5.  Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded.

Authors:  Daniel P Denning; Samir S Patel; Vladimir Uversky; Anthony L Fink; Michael Rexach
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

6.  Autonomy and robustness of translocation through the nuclear pore complex: a single-molecule study.

Authors:  Thomas Dange; David Grünwald; Antje Grünwald; Reiner Peters; Ulrich Kubitscheck
Journal:  J Cell Biol       Date:  2008-09-29       Impact factor: 10.539

7.  Nuclear transport of single molecules: dwell times at the nuclear pore complex.

Authors:  Ulrich Kubitscheck; David Grünwald; Andreas Hoekstra; Daniel Rohleder; Thorsten Kues; Jan Peter Siebrasse; Reiner Peters
Journal:  J Cell Biol       Date:  2005-01-17       Impact factor: 10.539

8.  Atomic structure of the Y complex of the nuclear pore.

Authors:  Kotaro Kelley; Kevin E Knockenhauer; Greg Kabachinski; Thomas U Schwartz
Journal:  Nat Struct Mol Biol       Date:  2015-03-30       Impact factor: 15.369

9.  Cell type-specific nuclear pores: a case in point for context-dependent stoichiometry of molecular machines.

Authors:  Alessandro Ori; Niccolò Banterle; Murat Iskar; Amparo Andrés-Pons; Claudia Escher; Huy Khanh Bui; Lenore Sparks; Victor Solis-Mezarino; Oliver Rinner; Peer Bork; Edward A Lemke; Martin Beck
Journal:  Mol Syst Biol       Date:  2013       Impact factor: 11.429

10.  Proteomic analysis of the mammalian nuclear pore complex.

Authors:  Janet M Cronshaw; Andrew N Krutchinsky; Wenzhu Zhang; Brian T Chait; Michael J Matunis
Journal:  J Cell Biol       Date:  2002-08-26       Impact factor: 10.539

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  3 in total

1.  Conformation of the nuclear pore in living cells is modulated by transport state.

Authors:  Joan Pulupa; Harriet Prior; Daniel S Johnson; Sanford M Simon
Journal:  Elife       Date:  2020-12-21       Impact factor: 8.140

2.  The Oncogenic Fusion Proteins SET-Nup214 and Sequestosome-1 (SQSTM1)-Nup214 Form Dynamic Nuclear Bodies and Differentially Affect Nuclear Protein and Poly(A)+ RNA Export.

Authors:  Sarah A Port; Adélia Mendes; Christina Valkova; Christiane Spillner; Birthe Fahrenkrog; Christoph Kaether; Ralph H Kehlenbach
Journal:  J Biol Chem       Date:  2016-09-09       Impact factor: 5.157

Review 3.  Cellular and Structural Studies of Eukaryotic Cells by Cryo-Electron Tomography.

Authors:  Miriam Sarah Weber; Matthias Wojtynek; Ohad Medalia
Journal:  Cells       Date:  2019-01-16       Impact factor: 6.600

  3 in total

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