| Literature DB >> 26901241 |
Jiahui Zhou1,2,3, Xiangning Zhang1,2,3, Shuming Liu1,2,3, Ziyou Wang1,2,3, Qicong Chen4, Yongfu Wu5, Zhiwei He1,2,3, Zunnan Huang1,2,3.
Abstract
Respiratory syncytial virus (RSV) is the most frequent cause of hospitalization in infants worldwide. It is recognized by Toll-like receptor 4 (TLR 4) and cluster of differentiation 14 (CD14) in the innate immune response. Previous case-control studies reported the influence of TLR4 Asp299Gly, TLR4 Thr399Ile, and CD14 C-159T polymorphisms on the risk of severe RSV infection. However, a decisive conclusion has not been achieved. Therefore, we performed this meta-analysis to examine the association between these three polymorphisms and the development of RSV bronchiolitis. A systematic literature search was performed using the PubMed, EMbase, Google Scholar Search, China National Knowledge Infrastructure, China Biological Medicine, and Wanfang Databases. The data were extracted and pooled odds ratios with 95% confidence intervals were calculated under six genetic models. A total of six studies with 1009 cases and 1348 controls, three studies with 473 cases and 481 controls, or four studies with 325 cases and 650 controls relating to each of the three polymorphisms were included in this meta-analysis. The analyzed data indicated that all of these polymorphisms were not associated with the risk of severe RSV infection. This is the first meta-analysis to investigate the relationship of TLR4 Asp299Gly, TLR4 Thr399Ile, and CD14 C-159T polymorphisms with the risk of severe RSV infection. Although the results of this retrospective analysis indicated a lack of the association, more extensive multicentric studies with large sample sizes are necessary to provide a more reliable estimation of the association between these three polymorphisms and RSV bronchiolitis susceptibility.Entities:
Keywords: Asp299Gly; C-159T; CD14; RSV infection; TLR4; Thr399Ile; meta-analysis; polymorphisms
Mesh:
Substances:
Year: 2016 PMID: 26901241 PMCID: PMC4814857 DOI: 10.1111/irv.12378
Source DB: PubMed Journal: Influenza Other Respir Viruses ISSN: 1750-2640 Impact factor: 4.380
Figure 1A flow diagram of the process used to select eligible studies.
The baseline characteristics of all the studies included in the meta‐analysis
| Gene locus | SNP (Gene) | Study | Area | Ethnicity | No. of cases | No. of controls | Genotype | HWE P | Genotyping method | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| case | control | |||||||||||||
| rs4986790 | Asp299Gly (TLR4) | AA | AG | GG | AA | AG | GG | |||||||
| Puthothu | Germany | Caucasian | 131 | 269 | 126 | 5 | 0 | 245 | 22 | 2 | 0·117 | PCR‐RFLP | ||
| Paulus | Britain | Caucasian | 136 | 113 | 128 | 7 | 1 | 104 | 9 | 0 | 1·000 | TaqMan | ||
| Helminen | Finland | Caucasian | 97 | 398 | 80 | 17 | 0 | 327 | 66 | 5 | 0·384 | TaqMan | ||
| Lofgren | Finland | Caucasian | 312 | 356 | 251 | 55 | 6 | 290 | 59 | 7 | 0·076 | PCR‐RFLP | ||
| Kresfelder | South Africa | African | 283 | 113 | 265 | 18 | 0 | 99 | 14 | 0 | 1·000 | TaqMan | ||
| Goutaki | Northern Greece | Caucasian | 50 | 99 | 45 | 2 | 3 | 93 | 1 | 5 | 0·000 | PCR‐RFLP | ||
| rs4986791 | Thr399Ile (TLR4) | CC | CT | TT | CC | CT | TT | |||||||
| Puthothu | Germany | Caucasian | 131 | 269 | 120 | 11 | 0 | 244 | 23 | 2 | 0·130 | PCR‐RFLP | ||
| Kresfelder | South Africa | African | 292 | 113 | 288 | 4 | 0 | 113 | 0 | 0 | 1·000 | PCR‐RFLP | ||
| Goutaki | Northern Greece | Caucasian | 50 | 99 | 31 | 12 | 7 | 51 | 35 | 13 | 0·099 | PCR‐RFLP | ||
| rs2569190 | C‐159T (CD14) | CC | CT | TT | CC | CT | TT | |||||||
| Tal | Finland | Caucasian | 99 | 90 | 27 | 60 | 12 | 25 | 53 | 12 | 0·084 | PCR‐RFLP | ||
| Puthothu | Germany | Caucasian | 127 | 261 | 41 | 59 | 27 | 79 | 124 | 58 | 0·533 | PCR‐RFLP | ||
| Inoue | Japan | Asian | 49 | 203 | 11 | 18 | 20 | 38 | 103 | 62 | 0·776 | PCR‐RFLP | ||
| Goutaki | Northern | Caucasian | 50 | 96 | 13 | 16 | 21 | 30 | 46 | 20 | 0·099 | PCR‐RFLP | ||
Quality assessment of the included studies based on Newcastle–Ottawa Scale criteria
| Literature | Selection | Comparability | Exposure | Total | |||||
|---|---|---|---|---|---|---|---|---|---|
| I | II | III | IV | V | VI | VII | VIII | ||
| Puthothu | * | * | * | * | * | * | * | * | ******** |
| Paulus | * | * | * | * | ** | * | * | * | ********* |
| Helmmen | * | * | * | * | * | * | ****** | ||
| Lofgren | * | * | * | * | * | * | * | * | ******** |
| Kresfelder | * | * | * | * | * | * | * | * | ******** |
| Goutaki | * | * | * | * | ** | * | * | * | ********* |
| Tal | * | * | * | * | * | * | ****** | ||
| Inoue | * | * | * | * | * | * | * | ******* | |
I, Is the case definition adequate? II, Representativeness of the cases II, Selection of Controls IV, Definition of Controls V, Comparability of cases and controls on the basis of the design or analysis VI, Ascertainment of exposure VII, Same method of ascertainment for cases and controls VIII, Non‐Response rate.
Meta‐analysis of the association between three polymorphisms in the TLR4/CD14 genes and risk of severe RSV infection
| Gene locus | Genetic comparison | Effect Model | OR(95%CI) |
| I2(%) (95%CI) | Begg's test(z, | Egger's test(t, |
|---|---|---|---|---|---|---|---|
| rs4986790 | G versus A | Fixed | 0·87 (0·69, 1·11) | 0·28 | 33 (0, 0·73) | 1·13, 0·26 | −1·11, 0·33 |
| rs4986790 | GG versus AA | Fixed | 0·93 (0·44, 2·00) | 0·86 | 0 (0, 0·79) | 0·24, 0·81 | −0·59, 0·60 |
| rs4986790 | GA versus AA | Fixed | 0·87 (0·66, 1·15) | 0·32 | 35 (0, 0·74) | 0·00, 1·00 | −0·44, 0·68 |
| rs4986790 | GG + GA versus AA | Fixed | 0·87 (0·67, 1·13) | 0·29 | 32 (0, 0·72) | 0·38, 1·07 | −0·90, 0·42 |
| rs4986790 | GG versus GA + AA | Fixed | 0·93 (0·43, 1·98) | 0·84 | 0 (0, 0·79) | 0·24, 0·81 | −0·53, 0·63 |
| rs4986791 | T versus C | Fixed | 0·84 (0·55, 1·29) | 0·43 | 0 (0, 0·90) | 1·04, 0·30 | 7·28, 0·09 |
| rs4986791 | TT versus CC | Fixed | 0·80 (0·31, 2·10) | 0·65 | 0 (0, 0·90) | 0·00, 100 | − |
| rs4986791 | TC versus CC | Fixed | 0·81 (0·48, 1·37) | 0·44 | 0 (‐) | 0·00, 1·00 | 0·94, 0·52 |
| rs4986791 | TT + TC versus CC | Fixed | 0·81 (0·50, 1·33) | 0·40 | 0 (‐) | 1·04, 0·30 | 1·93, 0·30 |
| rs4986791 | TT versus TC + CC | Fixed | 0·96 (0·38, 2·42) | 0·93 | 0 (0, 0·90) | 0·00, 1·00 | − |
| rs2569190 | T versus C | Fixed | 1·09 (0·89, 1·32) | 0·40 | 31 (0, 0·75) | 1·70, 0·09 | 1·95, 0·19 |
| rs2569190 | TT versus CC | Fixed | 1·14 (0·78, 1·68) | 0·49 | 15 (0, 0·61) | 0·34, 0·73 | 0·83, 0·50 |
| rs2569190 | TC versus CC | Fixed | 0·87 (0·63, 1·22) | 0·42 | 0 (0, 0·85) | 0·34, 0·73 | −1·07, 0·40 |
| rs2569190 | TT + TC versus CC | Fixed | 0·97 (0·71, 1·32) | 0·85 | 0 (0, 0·85) | 1·04, 0·96 | 1·04, 0·96 |
| rs2569190 | TT versus TC + CC | Random | 1·36 (0·83, 2·23) | 0·22 | 53 (0, 0·84) | 0·34, 0·73 | 0·54, 0·65 |
| rs2569190 | TC versus TT + CC | Fixed | 0·81 (0·61, 1·06) | 0·13 | 30 (0, 0·75) | 1·02, 0·308 | −1·59, 0·254 |
Figure 2Forest plots of TLR4 Asp299Gly (rs4986790) polymorphism and the risk of severe RSV infection in five genetic models. (A) the allelic model (G versus A); (B) the homozygous model (GG versus AA); (C) the heterozygous model (GA versus AA); (D) the dominant model (GG + GA versus AA); (E) the recessive model (GG versus GA + AA).
Figure 3Forest plots of CD14 C‐159T (rs2569190) polymorphism and the risk of severe RSV infection in six genetic models. (A) the allelic model (T versus C); (B) the homozygous model (TT versus CC); (C) the heterozygous model (TC versus CC); (D) the dominant model (TT + TC versus CC); (E) the recessive model (TT versus TC + CC); (F) the overdominant model (TC versus TT + CC).
Figure 4Begg's funnel plot to assess risk of publication bias under the allelic model (G versus A) of TLR4 Asp299Gly (rs4986790) polymorphism.