Literature DB >> 26896683

Extraction of high-quality RNA from pancreatic tissues for gene expression studies.

Cécile Augereau1, Frédéric P Lemaigre1, Patrick Jacquemin2.   

Abstract

Extracting RNA from pancreatic tissue is notoriously challenging because of the organ's high RNase content. Standard methods using TriPure or TRIzol classically yield RNA of sufficient quality for routine gene expression analysis but not for microarray or deep sequencing analysis. Here we developed a simple method to extract high-quality RNA from mouse pancreas. Our method uses an RNase inhibitor and combines different protocols using guanidium thiocyanate-phenol extraction. It enables reproducible isolation of RNA with an RNA integrity number around 9.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Mouse; Pancreas; RNA; RNA integrity number; RNA purification

Mesh:

Substances:

Year:  2016        PMID: 26896683     DOI: 10.1016/j.ab.2016.02.008

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  8 in total

1.  Comparing and Optimizing RNA Extraction from the Pancreas of Diabetic and Healthy Rats for Gene Expression Analyses.

Authors:  Amani M Al-Adsani; Sahar A Barhoush; Nasmah K Bastaki; Suzanne A Al-Bustan; Khaled K Al-Qattan
Journal:  Genes (Basel)       Date:  2022-05-14       Impact factor: 4.141

2.  Novel quantitative analysis of the S100P protein combined with endoscopic ultrasound-guided fine needle aspiration cytology in the diagnosis of pancreatic adenocarcinoma.

Authors:  Masafumi Chiba; Hiroo Imazu; Masayuki Kato; Keiichi Ikeda; Hiroshi Arakawa; Tomohiro Kato; Kazuki Sumiyama; Sadamu Homma
Journal:  Oncol Rep       Date:  2017-02-21       Impact factor: 3.906

3.  Clinical diagnostic value of viable Schistosoma japonicum eggs detected in host tissues.

Authors:  Kongzhen Gu; Yuesheng Li; Patrick Driguez; Qingren Zeng; Xinlin Yu; Hui Sun; Liting Cai; Yongkang He; Wenyang Wang; Donald P McManus
Journal:  BMC Infect Dis       Date:  2017-04-04       Impact factor: 3.090

4.  DIE-RNA: A Reproducible Strategy for the Digestion of Normal and Injured Pancreas, Isolation of Pancreatic Cells from Genetically Engineered Mouse Models and Extraction of High Quality RNA.

Authors:  Mohamad Assi; Nicolas Dauguet; Patrick Jacquemin
Journal:  Front Physiol       Date:  2018-02-27       Impact factor: 4.566

5.  Method Optimization for Extracting High-Quality RNA From the Human Pancreas Tissue.

Authors:  Eunsung Jun; Juyun Oh; Song Lee; Hye-Ryeong Jun; Eun Hye Seo; Jin-Young Jang; Song Cheol Kim
Journal:  Transl Oncol       Date:  2018-04-27       Impact factor: 4.243

6.  Differential Detection of Encapsidated versus Unencapsidated Enterovirus RNA in Samples Containing Pancreatic Enzymes-Relevance for Diabetes Studies.

Authors:  Maarit Oikarinen; Lori Bertolet; Antonio Toniolo; Sami Oikarinen; Jutta E Laiho; Alberto Pugliese; Richard E Lloyd; Heikki Hyöty
Journal:  Viruses       Date:  2020-07-11       Impact factor: 5.048

7.  Extraction of high-quality RNA from mouse pancreatic tumors.

Authors:  Kranthi Kumar Chougoni; Steven R Grossman
Journal:  MethodsX       Date:  2020-11-26

8.  The aryl hydrocarbon receptor contributes to tissue adaptation of intestinal eosinophils in mice.

Authors:  Nicola Laura Diny; Barbora Schonfeldova; Michael Shapiro; Matthew L Winder; Sunita Varsani-Brown; Brigitta Stockinger
Journal:  J Exp Med       Date:  2022-03-03       Impact factor: 14.307

  8 in total

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