Literature DB >> 26895397

Single-cell proteomics: potential implications for cancer diagnostics.

Sonia Gavasso1, Stein-Erik Gullaksen2, Jørn Skavland2, Bjørn T Gjertsen2,3.   

Abstract

Single-cell proteomics in cancer is evolving and promises to provide more accurate diagnoses based on detailed molecular features of cells within tumors. This review focuses on technologies that allow for collection of complex data from single cells, but also highlights methods that are adaptable to routine cancer diagnostics. Current diagnostics rely on histopathological analysis, complemented by mutational detection and clinical imaging. Though crucial, the information gained is often not directly transferable to defined therapeutic strategies, and predicting therapy response in a patient is difficult. In cancer, cellular states revealed through perturbed intracellular signaling pathways can identify functional mutations recurrent in cancer subsets. Single-cell proteomics remains to be validated in clinical trials where serial samples before and during treatment can reveal excessive clonal evolution and therapy failure; its use in clinical trials is anticipated to ignite a diagnostic revolution that will better align diagnostics with the current biological understanding of cancer.

Entities:  

Keywords:  Signal transduction inhibitors; acute myeloid leukemia; nuclear transport blockers; protein-protein interactions; transcription factor inhibitors

Mesh:

Substances:

Year:  2016        PMID: 26895397     DOI: 10.1586/14737159.2016.1156531

Source DB:  PubMed          Journal:  Expert Rev Mol Diagn        ISSN: 1473-7159            Impact factor:   5.225


  10 in total

1.  Single Amino Acid Variant Discovery in Small Numbers of Cells.

Authors:  Zhijing Tan; Xinpei Yi; Nicholas J Carruthers; Paul M Stemmer; David M Lubman
Journal:  J Proteome Res       Date:  2018-11-21       Impact factor: 4.466

2.  Chemical fixation to arrest phospholipid signaling for chemical cytometry.

Authors:  Angela Proctor; Christopher E Sims; Nancy L Allbritton
Journal:  J Chromatogr A       Date:  2017-05-10       Impact factor: 4.759

3.  Carrier-assisted One-pot Sample Preparation for Targeted Proteomics Analysis of Small Numbers of Human Cells.

Authors:  Kendall Martin; Tong Zhang; Pengfei Zhang; William B Chrisler; Fillmore L Thomas; Fen Liu; Tao Liu; Wei-Jun Qian; Richard D Smith; Tujin Shi
Journal:  J Vis Exp       Date:  2020-11-06       Impact factor: 1.355

4.  Carrier-Assisted Single-Tube Processing Approach for Targeted Proteomics Analysis of Low Numbers of Mammalian Cells.

Authors:  Pengfei Zhang; Matthew J Gaffrey; Ying Zhu; William B Chrisler; Thomas L Fillmore; Lian Yi; Carrie D Nicora; Tong Zhang; Huanming Wu; Jon Jacobs; Keqi Tang; Jacob Kagan; Sudhir Srivastava; Karin D Rodland; Wei-Jun Qian; Richard D Smith; Tao Liu; H Steven Wiley; Tujin Shi
Journal:  Anal Chem       Date:  2018-12-28       Impact factor: 6.986

5.  Single cell immune profiling by mass cytometry of newly diagnosed chronic phase chronic myeloid leukemia treated with nilotinib.

Authors:  Stein-Erik Gullaksen; Jørn Skavland; Sonia Gavasso; Vinko Tosevski; Krzysztof Warzocha; Claudia Dumrese; Augustin Ferrant; Tobias Gedde-Dahl; Andrzej Hellmann; Jeroen Janssen; Boris Labar; Alois Lang; Waleed Majeed; Georgi Mihaylov; Jesper Stentoft; Leif Stenke; Josef Thaler; Noortje Thielen; Gregor Verhoef; Jaroslava Voglova; Gert Ossenkoppele; Andreas Hochhaus; Henrik Hjorth-Hansen; Satu Mustjoki; Sieghart Sopper; Francis Giles; Kimmo Porkka; Dominik Wolf; Bjørn Tore Gjertsen
Journal:  Haematologica       Date:  2017-05-18       Impact factor: 9.941

6.  SU-8 free-standing microfluidic probes.

Authors:  A A Kim; K Kustanovich; D Baratian; A Ainla; M Shaali; G D M Jeffries; A Jesorka
Journal:  Biomicrofluidics       Date:  2017-02-14       Impact factor: 2.800

Review 7.  Understanding cell signaling in cancer stem cells for targeted therapy - can phosphoproteomics help to reveal the secrets?

Authors:  Wolfgang Gruber; Tamara Scheidt; Fritz Aberger; Christian G Huber
Journal:  Cell Commun Signal       Date:  2017-03-29       Impact factor: 5.712

8.  Spectral Library-Based Single-Cell Proteomics Resolves Cellular Heterogeneity.

Authors:  Lakmini Senavirathna; Cheng Ma; Ru Chen; Sheng Pan
Journal:  Cells       Date:  2022-08-07       Impact factor: 7.666

Review 9.  Single-Cell Proteomics: The Critical Role of Nanotechnology.

Authors:  Carlota Arias-Hidalgo; Pablo Juanes-Velasco; Alicia Landeira-Viñuela; Marina L García-Vaquero; Enrique Montalvillo; Rafael Góngora; Ángela-Patricia Hernández; Manuel Fuentes
Journal:  Int J Mol Sci       Date:  2022-06-16       Impact factor: 6.208

10.  Mass Cytometry for Detection of Silver at the Bacterial Single Cell Level.

Authors:  Yuting Guo; Sabine Baumgart; Hans-Joachim Stärk; Hauke Harms; Susann Müller
Journal:  Front Microbiol       Date:  2017-07-17       Impact factor: 5.640

  10 in total

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