Literature DB >> 26895026

Substrate and Enzyme Specificity of the Kinetic Isotope Effects Associated with the Dioxygenation of Nitroaromatic Contaminants.

Sarah G Pati1,2, Hans-Peter E Kohler1, Anna Pabis3, Piotr Paneth3, Rebecca E Parales4, Thomas B Hofstetter1,2.   

Abstract

Compound-specific isotope analysis (CSIA) is a promising approach for tracking biotransformation of organic pollutants, but isotope fractionation associated with aromatic oxygenations is only poorly understood. We investigated the dioxygenation of a series of nitroaromatic compounds to the corresponding catechols by two enzymes, namely, nitrobenzene and 2-nitrotoluene dioxygenase (NBDO and 2NTDO) to elucidate the enzyme- and substrate-specificity of C and H isotope fractionation. While the apparent (13)C- and (2)H-kinetic isotope effects of nitrobenzene, nitrotoluene isomers, 2,6-dinitrotoluene, and naphthalene dioxygenation by NBDO varied considerably, the correlation of C and H isotope fractionation revealed a common mechanism for nitrobenzene and nitrotoluenes. Similar observations were made for the dioxygenation of these substrates by 2NTDO. Evaluation of reaction kinetics, isotope effects, and commitment-to-catalysis based on experiment and theory showed that rates of dioxygenation are determined by the enzymatic O2 activation and aromatic C oxygenation. The contribution of enzymatic O2 activation to the reaction rate varies for different nitroaromatic substrates of NBDO and 2NTDO. Because aromatic dioxygenation by nonheme iron dioxygenases is frequently the initial step of biodegradation, O2 activation kinetics may also have been responsible for the minor isotope fractionation reported for the oxygenation of other aromatic contaminants.

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Year:  2016        PMID: 26895026     DOI: 10.1021/acs.est.5b05084

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  4 in total

1.  Substrate-Specific Coupling of O2 Activation to Hydroxylations of Aromatic Compounds by Rieske Non-heme Iron Dioxygenases.

Authors:  Sarah G Pati; Charlotte E Bopp; Hans-Peter E Kohler; Thomas B Hofstetter
Journal:  ACS Catal       Date:  2022-05-16       Impact factor: 13.700

2.  Commentary on Ivancic et al.: Enzyme kinetics from circular dichroism of insulin reveals mechanistic insights into the regulation of insulin-degrading enzyme.

Authors:  Giuseppe Grasso
Journal:  Biosci Rep       Date:  2018-11-28       Impact factor: 3.840

3.  Linking Increased Isotope Fractionation at Low Concentrations to Enzyme Activity Regulation: 4-Cl Phenol Degradation by Arthrobacter chlorophenolicus A6.

Authors:  Kankana Kundu; Aileen Melsbach; Benjamin Heckel; Sarah Schneidemann; Dheeraj Kanapathi; Sviatlana Marozava; Juliane Merl-Pham; Martin Elsner
Journal:  Environ Sci Technol       Date:  2022-02-11       Impact factor: 9.028

4.  Elucidating the Role of O2 Uncoupling in the Oxidative Biodegradation of Organic Contaminants by Rieske Non-heme Iron Dioxygenases.

Authors:  Charlotte E Bopp; Nora M Bernet; Hans-Peter E Kohler; Thomas B Hofstetter
Journal:  ACS Environ Au       Date:  2022-07-07
  4 in total

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