Literature DB >> 26892921

Soft Corals Biodiversity in the Egyptian Red Sea: A Comparative MS and NMR Metabolomics Approach of Wild and Aquarium Grown Species.

Mohamed A Farag1, Andrea Porzel2, Montasser A Al-Hammady3, Mohamed-Elamir F Hegazy4, Achim Meyer5, Tarik A Mohamed4, Hildegard Westphal5, Ludger A Wessjohann2.   

Abstract

Marine life has developed unique metabolic and physiologic capabilities and advanced symbiotic relationships to survive in the varied and complex marine ecosystems. Herein, metabolite composition of the soft coral genus Sarcophyton was profiled with respect to its species and different habitats along the coastal Egyptian Red Sea via (1)H NMR and ultra performance liquid chromatography-mass spectrometry (UPLC-MS) large-scale metabolomics analyses. The current study extends the application of comparative secondary metabolite profiling from plants to corals revealing for metabolite compositional differences among its species via a comparative MS and NMR approach. This was applied for the first time to investigate the metabolism of 16 Sarcophyton species in the context of their genetic diversity or growth habitat. Under optimized conditions, we were able to simultaneously identify 120 metabolites including 65 diterpenes, 8 sesquiterpenes, 18 sterols, and 15 oxylipids. Principal component analysis (PCA) and orthogonal projection to latent structures-discriminant analysis (OPLS) were used to define both similarities and differences among samples. For a compound based classification of coral species, UPLC-MS was found to be more effective than NMR. The main differentiations emanate from cembranoids and oxylipids. The specific metabolites that contribute to discrimination between soft corals of S. ehrenbergi from the three different growing habitats also belonged to cembrane type diterpenes, with aquarium S. ehrenbergi corals being less enriched in cembranoids compared to sea corals. PCA using either NMR or UPLC-MS data sets was found equally effective in predicting the species origin of unknown Sarcophyton. Cyclopropane containing sterols observed in abundance in corals may act as cellular membrane protectant against the action of coral toxins, that is, cembranoids.

Entities:  

Keywords:  Sarcophyton; cembranoids; corals; cyclopropyl sterols; metabolomic fingerprinting; nuclear magnetic resonance (NMR); ultra performance liquid chromatography−mass spectrometry (UPLC−MS)

Mesh:

Substances:

Year:  2016        PMID: 26892921     DOI: 10.1021/acs.jproteome.6b00002

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  22 in total

Review 1.  Recent Advances in NMR-Based Metabolomics.

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  Anal Chem       Date:  2016-12-02       Impact factor: 6.986

2.  Patterns of chemical diversity in the marine ascidian Phallusia spp.: anti-tumor activity and metabolic pathway inhibiting steroid biosynthesis.

Authors:  Satheesh Kumar Palanisamy; Velusamy Arumugam; Magesh D Peter; Umamaheswari Sundaresan
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3.  Salicylic acid and its derivatives elicit the production of diterpenes and sterols in corals and their algal symbionts: a metabolomics approach to elicitor SAR.

Authors:  Mohamed A Farag; Amal A Maamoun; Achim Meyer; Ludger A Wessjohann
Journal:  Metabolomics       Date:  2018-09-17       Impact factor: 4.290

4.  A Comparative Metabolomics Approach Reveals Early Biomarkers for Metabolic Response to Acute Myocardial Infarction.

Authors:  Sara E Ali; Mohamed A Farag; Paul Holvoet; Rasha S Hanafi; Mohamed Z Gad
Journal:  Sci Rep       Date:  2016-11-08       Impact factor: 4.379

5.  Metabolomics reveals biotic and abiotic elicitor effects on the soft coral Sarcophyton ehrenbergi terpenoid content.

Authors:  Mohamed A Farag; Dalia A Al-Mahdy; Achim Meyer; Hildegard Westphal; Ludger A Wessjohann
Journal:  Sci Rep       Date:  2017-04-05       Impact factor: 4.379

6.  New Cytotoxic Cembranoid from Indonesian Soft Coral Sarcophyton sp.

Authors:  Hedi Indra Januar; Neviaty Putri Zamani; Dedi Soedharma; Ekowati Chasanah
Journal:  Pharmacognosy Res       Date:  2017 Jan-Mar

7.  Comparison of Metabolomics Approaches for Evaluating the Variability of Complex Botanical Preparations: Green Tea (Camellia sinensis) as a Case Study.

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Journal:  J Nat Prod       Date:  2017-04-28       Impact factor: 4.050

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Journal:  J Enzyme Inhib Med Chem       Date:  2017-12       Impact factor: 5.051

9.  Cytotoxic Effects of Sarcophyton sp. Soft Corals-Is There a Correlation to Their NMR Fingerprints?

Authors:  Mohamed A Farag; Mostafa I Fekry; Montasser A Al-Hammady; Mohamed N Khalil; Hesham R El-Seedi; Achim Meyer; Andrea Porzel; Hildegard Westphal; Ludger A Wessjohann
Journal:  Mar Drugs       Date:  2017-07-04       Impact factor: 5.118

10.  Disentangling thermal stress responses in a reef-calcifier and its photosymbionts by shotgun proteomics.

Authors:  Marleen Stuhr; Bernhard Blank-Landeshammer; Claire E Reymond; Laxmikanth Kollipara; Albert Sickmann; Michal Kucera; Hildegard Westphal
Journal:  Sci Rep       Date:  2018-02-23       Impact factor: 4.379

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