Literature DB >> 26883969

Molecular formula assignment for dissolved organic matter (DOM) using high-field FT-ICR-MS: chemical perspective and validation of sulphur-rich organic components (CHOS) in pit lake samples.

Peter Herzsprung1, Norbert Hertkorn2, Wolf von Tümpling3, Mourad Harir2, Kurt Friese3, Philippe Schmitt-Kopplin2.   

Abstract

Molecular formula assignment is one of the key challenges in processing high-field Fourier transform ion cyclotron resonance mass spectrometric (FT-ICR-MS) datasets. The number of potential solutions for an elemental formula increases exponentially with increasing molecular mass, especially when non-oxygen heteroatoms like N, S or P are included. A method was developed from the chemical perspective and validated using a Suwannee River Fulvic Acid (SRFA) dataset which is dominated by components consisting exclusively of C, H and O (78 % CHO). In order to get information on the application range and robustness of this method, we investigated a FT-ICR-MS dataset which was merged from 18 mine pit lake pore waters and 3 river floodplain soil waters. This dataset contained 50 % CHO and 18 % CHOS on average, whereas the former SRFA dataset contained only 1.5 % CHOS. The mass calculator was configured to allow up to five nitrogen atoms and up to one sulphur atom in assigning formulas to mass peaks. More than 50 % multiple-formula assignments were found for peaks with masses > 650 Da. Based on DBE - O frequency diagrams, many CHO, CHOS1, CHON1 and CHON1S1 molecular series were ultimately assigned to many m/z and considered to be reliable solutions. The unequivocal data pool could thus be enlarged by 523 (6.8 %) CHOS1 components. In contrast to the method validation with CHO-rich SRFA, validation with sulphur-rich pit lake samples showed that formulas with a higher number of non-oxygen heteroatoms can be more reliable assignments in many cases. As an example: CHOS molecular series were reliable and the CHO classes were unreliable amongst other molecular classes in many multiple-formula assignments from the sulphur-rich pit lake samples. Graphical abstract An exemplary frequency versus DBE - O diagram. CHOS components but not CHO (and not CHON2 or CHON2S) components were considered here reliable.

Entities:  

Keywords:  CHOS/CHON molecular series; DOM; FT-ICR-MS; Formula assignment; Validation

Year:  2016        PMID: 26883969     DOI: 10.1007/s00216-016-9341-2

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  3 in total

1.  Contribution of ketone/aldehyde-containing compounds to the composition and optical properties of Suwannee River fulvic acid revealed by ultrahigh resolution mass spectrometry and deuterium labeling.

Authors:  Marla R Bianca; Daniel R Baluha; Michael Gonsior; Philippe Schmitt-Kopplin; Rossana Del Vecchio; Neil V Blough
Journal:  Anal Bioanal Chem       Date:  2020-01-16       Impact factor: 4.142

2.  Interactive van Krevelen diagrams - Advanced visualisation of mass spectrometry data of complex mixtures.

Authors:  William Kew; John W T Blackburn; David J Clarke; Dušan Uhrín
Journal:  Rapid Commun Mass Spectrom       Date:  2017-04-15       Impact factor: 2.419

3.  Epiphytic Bacteria Are Essential for the Production and Transformation of Algae-Derived Carboxyl-Rich Alicyclic Molecule (CRAM)-like DOM.

Authors:  Yang Liu; Jinjun Kan; Chen He; Quan Shi; Yan-Xia Liu; Zhen-Chuan Fan; Jun Sun
Journal:  Microbiol Spectr       Date:  2021-10-20
  3 in total

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