Literature DB >> 26882551

The ubiquitin signal and autophagy: an orchestrated dance leading to mitochondrial degradation.

Koji Yamano1, Noriyuki Matsuda2, Keiji Tanaka3.   

Abstract

The quality of mitochondria, essential organelles that produce ATP and regulate numerous metabolic pathways, must be strictly monitored to maintain cell homeostasis. The loss of mitochondrial quality control systems is acknowledged as a determinant for many types of neurodegenerative diseases including Parkinson's disease (PD). The two gene products mutated in the autosomal recessive forms of familial early-onset PD, Parkin and PINK1, have been identified as essential proteins in the clearance of damaged mitochondria via an autophagic pathway termed mitophagy. Recently, significant progress has been made in understanding how the mitochondrial serine/threonine kinase PINK1 and the E3 ligase Parkin work together through a novel stepwise cascade to identify and eliminate damaged mitochondria, a process that relies on the orchestrated crosstalk between ubiquitin/phosphorylation signaling and autophagy. In this review, we highlight our current understanding of the detailed molecular mechanisms governing Parkin-/PINK1-mediated mitophagy and the evidences connecting Parkin/PINK1 function and mitochondrial clearance in neurons.
© 2016 The Authors.

Entities:  

Keywords:  PINK1; Parkin; Parkinson's disease; mitochondria; mitophagy

Mesh:

Substances:

Year:  2016        PMID: 26882551      PMCID: PMC4772979          DOI: 10.15252/embr.201541486

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  180 in total

Review 1.  Endocytosis: the DUB version.

Authors:  Michael J Clague; Sylvie Urbé
Journal:  Trends Cell Biol       Date:  2006-09-22       Impact factor: 20.808

2.  Parkin-catalyzed ubiquitin-ester transfer is triggered by PINK1-dependent phosphorylation.

Authors:  Masahiro Iguchi; Yuki Kujuro; Kei Okatsu; Fumika Koyano; Hidetaka Kosako; Mayumi Kimura; Norihiro Suzuki; Shinichiro Uchiyama; Keiji Tanaka; Noriyuki Matsuda
Journal:  J Biol Chem       Date:  2013-06-10       Impact factor: 5.157

3.  A sensitive and quantitative technique for detecting autophagic events based on lysosomal delivery.

Authors:  Hiroyuki Katayama; Takako Kogure; Noboru Mizushima; Tamotsu Yoshimori; Atsushi Miyawaki
Journal:  Chem Biol       Date:  2011-08-26

4.  Parkin and PINK1 function in a vesicular trafficking pathway regulating mitochondrial quality control.

Authors:  Gian-Luca McLelland; Vincent Soubannier; Carol X Chen; Heidi M McBride; Edward A Fon
Journal:  EMBO J       Date:  2014-01-20       Impact factor: 11.598

5.  Different dynamic movements of wild-type and pathogenic VCPs and their cofactors to damaged mitochondria in a Parkin-mediated mitochondrial quality control system.

Authors:  Yoko Kimura; Junpei Fukushi; Seiji Hori; Noriyuki Matsuda; Kei Okatsu; Yukie Kakiyama; Junko Kawawaki; Akira Kakizuka; Keiji Tanaka
Journal:  Genes Cells       Date:  2013-11-12       Impact factor: 1.891

6.  Unfolding of preproteins upon import into mitochondria.

Authors:  B Gaume; C Klaus; C Ungermann; B Guiard; W Neupert; M Brunner
Journal:  EMBO J       Date:  1998-11-16       Impact factor: 11.598

7.  PARK6-linked parkinsonism occurs in several European families.

Authors:  Enza Maria Valente; Francesco Brancati; Alessandro Ferraris; Elizabeth A Graham; Mary B Davis; Monique M B Breteler; Thomas Gasser; Vincenzo Bonifati; Anna Rita Bentivoglio; Giuseppe De Michele; Alexandra Dürr; Pietro Cortelli; Dietmar Wassilowsky; Biswadjiet S Harhangi; Nina Rawal; Viviana Caputo; Alessandro Filla; Giuseppe Meco; Ben A Oostra; Alexis Brice; Alberto Albanese; Bruno Dallapiccola; Nicholas W Wood
Journal:  Ann Neurol       Date:  2002-01       Impact factor: 10.422

Review 8.  The ubiquitous role of ubiquitin in the DNA damage response.

Authors:  Abdallah Al-Hakim; Cristina Escribano-Diaz; Marie-Claude Landry; Lara O'Donnell; Stephanie Panier; Rachel K Szilard; Daniel Durocher
Journal:  DNA Repair (Amst)       Date:  2010-11-04

9.  An initial step of GAS-containing autophagosome-like vacuoles formation requires Rab7.

Authors:  Hitomi Yamaguchi; Ichiro Nakagawa; Akitsugu Yamamoto; Atsuo Amano; Takeshi Noda; Tamotsu Yoshimori
Journal:  PLoS Pathog       Date:  2009-11-26       Impact factor: 6.823

10.  PINK1-Parkin pathway activity is regulated by degradation of PINK1 in the mitochondrial matrix.

Authors:  Ruth E Thomas; Laurie A Andrews; Jonathon L Burman; Wen-Yang Lin; Leo J Pallanck
Journal:  PLoS Genet       Date:  2014-05-29       Impact factor: 5.917

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  92 in total

1.  Comparative analysis of Parkinson's disease-associated genes in mice reveals altered survival and bioenergetics of Parkin-deficient dopamine neurons.

Authors:  Nicolas Giguère; Consiglia Pacelli; Caroline Saumure; Marie-Josée Bourque; Diana Matheoud; Daniel Levesque; Ruth S Slack; David S Park; Louis-Éric Trudeau
Journal:  J Biol Chem       Date:  2018-04-26       Impact factor: 5.157

Review 2.  The Roles of SUMO in Metabolic Regulation.

Authors:  Elena Kamynina; Patrick J Stover
Journal:  Adv Exp Med Biol       Date:  2017       Impact factor: 2.622

3.  Dynamics of PARKIN-Dependent Mitochondrial Ubiquitylation in Induced Neurons and Model Systems Revealed by Digital Snapshot Proteomics.

Authors:  Alban Ordureau; Joao A Paulo; Wei Zhang; Tim Ahfeldt; Jiuchun Zhang; Erin F Cohn; Zhonggang Hou; Jin-Mi Heo; Lee L Rubin; Sachdev S Sidhu; Steven P Gygi; J Wade Harper
Journal:  Mol Cell       Date:  2018-04-12       Impact factor: 17.970

Review 4.  Mitochondrial network remodeling: an important feature of myogenesis and skeletal muscle regeneration.

Authors:  Fasih Ahmad Rahman; Joe Quadrilatero
Journal:  Cell Mol Life Sci       Date:  2021-03-22       Impact factor: 9.261

5.  Ubiquitination of exposed glycoproteins by SCFFBXO27 directs damaged lysosomes for autophagy.

Authors:  Yukiko Yoshida; Sayaka Yasuda; Toshiharu Fujita; Maho Hamasaki; Arisa Murakami; Junko Kawawaki; Kazuhiro Iwai; Yasushi Saeki; Tamotsu Yoshimori; Noriyuki Matsuda; Keiji Tanaka
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-25       Impact factor: 11.205

Review 6.  Parkinson's disease: convergence on synaptic homeostasis.

Authors:  Sandra-Fausia Soukup; Roeland Vanhauwaert; Patrik Verstreken
Journal:  EMBO J       Date:  2018-07-31       Impact factor: 11.598

7.  Highly Multiplexed Quantitative Mass Spectrometry Analysis of Ubiquitylomes.

Authors:  Christopher M Rose; Marta Isasa; Alban Ordureau; Miguel A Prado; Sean A Beausoleil; Mark P Jedrychowski; Daniel J Finley; J Wade Harper; Steven P Gygi
Journal:  Cell Syst       Date:  2016-09-22       Impact factor: 10.304

Review 8.  Neuronal Autophagy in Synaptic Functions and Psychiatric Disorders.

Authors:  Toshifumi Tomoda; Kun Yang; Akira Sawa
Journal:  Biol Psychiatry       Date:  2019-07-29       Impact factor: 13.382

9.  Knockdown of the mitochondria-localized protein p13 protects against experimental parkinsonism.

Authors:  Naoki Inoue; Sae Ogura; Atsushi Kasai; Takanobu Nakazawa; Kazuya Ikeda; Shintaro Higashi; Ayako Isotani; Kousuke Baba; Hideki Mochizuki; Harutoshi Fujimura; Yukio Ago; Atsuko Hayata-Takano; Kaoru Seiriki; Yusuke Shintani; Norihito Shintani; Hitoshi Hashimoto
Journal:  EMBO Rep       Date:  2018-01-25       Impact factor: 8.807

Review 10.  Molecular Functions of Glycoconjugates in Autophagy.

Authors:  Kamau Fahie; Natasha E Zachara
Journal:  J Mol Biol       Date:  2016-06-23       Impact factor: 5.469

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