Literature DB >> 26879650

Mid-infrared spectroscopy for protein analysis: potential and challenges.

Ángela I López-Lorente1, Boris Mizaikoff2.   

Abstract

Mid-infrared (MIR) spectroscopy investigates the interaction of MIR photons with both organic and inorganic molecules via the excitation of vibrational and rotational modes, providing inherent molecular selectivity. In general, infrared (IR) spectroscopy is particularly sensitive to protein structure and structural changes via vibrational resonances originating from the polypeptide backbone or side chains; hence information on the secondary structure of proteins can be obtained in a label-free fashion. In this review, the challenges for IR spectroscopy for protein analysis are discussed as are the potential and limitations of different IR spectroscopic techniques enabling protein analysis. In particular, the amide I spectral range has been widely used to study protein secondary structure, conformational changes, protein aggregation, protein adsorption, and the formation of amyloid fibrils. In addition to representative examples of the potential of IR spectroscopy in various fields related to protein analysis, the potential of protein analysis taking advantage of miniaturized MIR systems, including waveguide-enhanced MIR sensors, is detailed.

Entities:  

Keywords:  Amyloid; Conformational changes; Infrared spectroscopy; Mid-infrared; Proteins; Secondary structure

Mesh:

Substances:

Year:  2016        PMID: 26879650     DOI: 10.1007/s00216-016-9375-5

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  13 in total

Review 1.  Label-Free Physical Techniques and Methodologies for Proteins Detection in Microfluidic Biosensor Structures.

Authors:  Georgii Konoplev; Darina Agafonova; Liubov Bakhchova; Nikolay Mukhin; Marharyta Kurachkina; Marc-Peter Schmidt; Nikolay Verlov; Alexander Sidorov; Aleksandr Oseev; Oksana Stepanova; Andrey Kozyrev; Alexander Dmitriev; Soeren Hirsch
Journal:  Biomedicines       Date:  2022-01-18

2.  Theoretical Infrared Spectra: Quantitative Similarity Measures and Force Fields.

Authors:  Henning Henschel; Alfred T Andersson; Willem Jespers; Mohammad Mehdi Ghahremanpour; David van der Spoel
Journal:  J Chem Theory Comput       Date:  2020-04-23       Impact factor: 6.006

3.  Reagent-free total protein quantification of intact extracellular vesicles by attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy.

Authors:  Veronika Szentirmai; András Wacha; Csaba Németh; Diána Kitka; Anita Rácz; Károly Héberger; Judith Mihály; Zoltán Varga
Journal:  Anal Bioanal Chem       Date:  2020-05-29       Impact factor: 4.142

4.  Near-infrared and mid-infrared semiconductor broadband light emitters.

Authors:  Chun-Cai Hou; Hong-Mei Chen; Jin-Chuan Zhang; Ning Zhuo; Yuan-Qing Huang; Richard A Hogg; David Td Childs; Ji-Qiang Ning; Zhan-Guo Wang; Feng-Qi Liu; Zi-Yang Zhang
Journal:  Light Sci Appl       Date:  2018-03-23       Impact factor: 17.782

Review 5.  Review: Detection and quantification of proteins in human urine.

Authors:  Sultan Aitekenov; Abduzhappar Gaipov; Rostislav Bukasov
Journal:  Talanta       Date:  2020-10-14       Impact factor: 6.057

6.  pH-controlled stacking direction of the β-strands in peptide fibrils.

Authors:  Wei-Hsuan Tseng; Szu-Hua Chen; Hirotsugu Hiramatsu
Journal:  Sci Rep       Date:  2020-12-17       Impact factor: 4.379

7.  Analysis and comparison of protein secondary structures in the rachis of avian flight feathers.

Authors:  Pin-Yen Lin; Pei-Yu Huang; Yao-Chang Lee; Chen Siang Ng
Journal:  PeerJ       Date:  2022-02-28       Impact factor: 2.984

8.  Analyzing the Interaction between Anthocyanins and Native or Heat-Treated Whey Proteins Using Infrared Spectroscopy.

Authors:  Shuai Ren; Luis Rodriguez-Saona; M Monica Giusti
Journal:  Molecules       Date:  2022-02-24       Impact factor: 4.411

9.  Nanoplasmonic mid-infrared biosensor for in vitro protein secondary structure detection.

Authors:  Dordaneh Etezadi; John B Warner Iv; Francesco S Ruggeri; Giovanni Dietler; Hilal A Lashuel; Hatice Altug
Journal:  Light Sci Appl       Date:  2017-08-25       Impact factor: 17.782

10.  Experimental Treatment of Hazardous Ash Waste by Microbial Consortium Aspergillus niger and Chlorella sp.: Decrease of the Ni Content and Identification of Adsorption Sites by Fourier-Transform Infrared Spectroscopy.

Authors:  Alexandra Šimonovičová; Alžbeta Takáčová; Ivan Šimkovic; Sanja Nosalj
Journal:  Front Microbiol       Date:  2021-12-07       Impact factor: 5.640

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