| Literature DB >> 26877853 |
Gang Wang1, Ping Xu1, Wei Feng2, Xianyan Jiang3, Tao Zhang3, Jian Li3.
Abstract
OBJECTIVES: To investigate the association of single nucleotide polymorphisms (SNPs) in the peroxisome proliferator-activated receptors gamma (PPARG) with essential hypertension (EH) and additional role of gene- high-density lipoprotein cholesterol (HDL) interaction.Entities:
Keywords: Essential hypertension; HDL; Interaction; PPAR-γ; Single nucleotide poly-; morphisms
Year: 2015 PMID: 26877853 PMCID: PMC4744363
Source DB: PubMed Journal: Iran J Basic Med Sci ISSN: 2008-3866 Impact factor: 2.699
Probe sequence for three single-nucleotide polymorphisms (SNPs) used for TaqMan fluorescence probe detection
| SNP ID | SNP | Chromosome | Position | Nucleotide substitution | Probe sequence |
|---|---|---|---|---|---|
| rs709158 | Intron A>G | 3 | 12403176 | A>G | 5’-AGATACGGGGGAGGAAATTCACTGG[A/G] |
| rs10865710 | C681G | 3 | 12293198 | C>G | 5’-TTGGCATTAGATGCTGTTTTGTCTT[C/G] |
| rs1805192 | Pro12Ala | 3 | 12361238 | C>G | 5’-ACCTCAGACAGATTGTCACGGAACA[C/G] |
General characteristics of 1640 study participants in case and control groups
| Variables | EH cases group (n=816) | Control group (n=824) | |
|---|---|---|---|
| Age (year) | 52.8±16.2 | 51.4±17.6 | 0.281 |
| Males N (%) | 387 (47.4) | 419 (50.8) | 0.184 |
| High fat diet N (%) | 296 (36.3) | 240 (29.1) | 0.002 |
| Low fiber diet N (%) | 152 (18.6) | 116 (14.1) | 0.016 |
| Smoke N (%) | 320 (39.2) | 289 (35.1) | 0.095 |
| Alcohol consumption N (%) | 268 (32.8) | 217 (26.3) | 0.005 |
| WC (cm) | 92.4±17.8 | 83.2±16.9 | <0.001 |
| BMI (kg/m2) | 26.9±9.7 | 24.6±10.8 | <0.001 |
| FPG (mmol/l) | 5.8±1.2 | 5.3±1.1 | <0.001 |
| TG (mmol/l) | 1.3±0.6 | 1.2± 0.5 | <0.001 |
| TC (mmol/l) | 4.8±0.9 | 4.5±1.0 | <0.001 |
| HDL (mmol/l) | 1.24±0.33 | 1.31±0.27 | 0.003 |
| Income per month/person N (%) | |||
| <2000 | 538 (65.9) | 578 (70.2) | |
| 2000- | 215 (26.3) | 212 (25.7) | |
| >=5000 | 63 (7.8) | 34 (4.1) | 0.006 |
| Sedentary behavior N (%) | 180 (22.0) | 142 (17.3) | 0.019 |
| Family history of EH N (%) | 237 (29.1) | 194 (23.5) | 0.011 |
Note: Mean± standard deviation for age, WC, BMI, FPG, TC, TG, HDL-C; TC, total cholesterol; HDL, high-density lipoprotein; LDL, low-density lipoprotein; FPG, fasting plasma glucose; TG, triglyceride; WC, waist circumference; BMI, body mass index.
Genotype and allele frequencies of three single-nucleotide polymorphisms between case and control groups
| SNPs | Genotypes and Alleles | Frequencies N(%) | OR (95%CI) | |||||
|---|---|---|---|---|---|---|---|---|
| Cases (n=816) | Controls (n=824) | SBP≥140mmHg | DBP≥90mmHg | HBP | ||||
| rs10865710 | ||||||||
| CC | 428 (52.4) | 432 (52.4) | 1.00 | 1.00 | 1.00 | 0.728 | ||
| CG | 316 (38.7) | 332 (40.3) | 0.86 (0.79-1.38) | 0.89 (0.72-1.34) | 0.87 (0.75-1.36) | |||
| GG | 72 (8.8) | 60(7.3) | 1.05 (0.92-1.41) | 1.08 (0.88-1.37) | 1.10 (0.84-1.43) | |||
| GG+CG | 386 (47.5) | 392 (47.6) | 1.01 (0.74-1.69) | 1.03 (0.80-1.54) | 1.04 (0.70-1.58) | |||
| C | 1172 (71.8) | 1203 (73.0) | ||||||
| G | 460 (28.2) | 445 (27.0) | ||||||
| rs709158 | ||||||||
| AA | 415 (50.8) | 439 (53.3) | 1.00 | 1.00 | 1.00 | 0.988 | ||
| AG | 330 (40.4) | 325 (39.4) | 1.02 (0.83-1.37) | 1.01 (0.68-1.45) | 0.98 (0.65-1.49) | |||
| GG | 71(8.8) | 60 (7.3) | 1.06 (0.79-1.44) | 1.05 (0.83-1.39) | 1.02 (0.80-1.63) | |||
| GG+AG | 391 (49.2) | 385 (46.7) | 1.10 (0.81-1.65) | 1.07 (0.83-1.47) | 1.04 (0.74-1.56) | |||
| A | 1160 (71.1) | 1203 (73.0) | ||||||
| G | 472 (28.9) | 445 (27.0) | ||||||
| rs1805192 | ||||||||
| Pro/Pro | 536 (65.7) | 426 (51.7) | 1.00 | 1.00 | 1.00 | 0.071 | ||
| Pro/Ala | 244 (29.9) | 318 (38.6) | 0.70 (0.55-0.89) | 0.77 (0.59-0.98) | 0.66 (0.54-0.82)[ | |||
| Ala/Ala | 36 (4.4) | 80 (9.7) | 0.76 (0.51-1.14) | 0.40 (0.23-0.69)[ | 0.48 (0.34-0.70)[ | |||
| Ala/Ala+ Pro/Ala | 280 (34.3) | 398 (48.3) | 0.78 (0.60-1.01) | 0.67 (0.51-0.90)[ | 0.65 (0.53-0.83)[ | |||
| Pro | 1316 (80.6) | 1170 (71.0) | ||||||
| Ala | 316 (19.4) | 478 (29.0) | ||||||
Adjusted for gender, age, smoking, and alcohol status.
P<0.05; The nucleotide substitution of rs1805192 was C>G.
Interaction analysis for rs1805192 and HDL on essential hypertension by using logistic regression
| rs1805192 | High HDL[ | OR (95% CI) | |
|---|---|---|---|
| Pro/Pro | No | 1.00 | - |
| Pro/Ala or Ala/Ala | No | 0.85 (0.62-0.94) | 0.013 |
| Pro/Pro | Yes | 0.62 (0.37-0.85) | <0.001 |
| Pro/Ala or Ala/Ala | Yes | 0.46 (0.28-0.59) | <0.001 |
Adjusted for gender, age, smoking, and alcohol status.
HDL cholesterol (HDL-C more than1.0 mmol/l in men and more than 1.3 mmol/l in women).