| Literature DB >> 26873404 |
Desika Moodley1, Şerban Procheş2, John R U Wilson3.
Abstract
Significant progress has been made in understanding biological invasions recently, and one of the key findings is that the determinants of naturalization and invasion success vary from group to group. Here, we explore this variation for one of the largest plant families in the world, the Araceae. This group provides an excellent opportunity for identifying determinants of invasiveness in herbaceous plants, since it is one of the families most popular with horticulturalists, with species occupying various habitats and comprising many different life forms. We first developed a checklist of 3494 species of Araceae using online databases and literature sources. We aimed to determine whether invasiveness across the introduction-naturalization-invasion continuum is associated to particular traits within the family, and whether analyses focussed on specific life forms can reveal any mechanistic correlates. Boosted regression tree models were based on species invasion statuses as the response variables, and traits associated with human use, biological characteristics and distribution as the explanatory variables. The models indicate that biological traits such as plant life form and pollinator type are consistently strong correlates of invasiveness. Additionally, large-scale correlates such as the number of native floristic regions and number of introduced regions are also influential at particular stages in the invasion continuum. We used these traits to build a phenogram showing groups defined by the similarity of characters. We identified nine groups that have a greater tendency to invasiveness (includingAlocasia, the Lemnoideae andEpipremnum). From this, we propose a list of species that are not currently invasive for which we would recommend a precautionary approach to be taken. The successful management of plant invasions will depend on understanding such context-dependent effects across taxonomic groups, and across the different stages of the invasion process. Published by Oxford University Press on behalf of the Annals of Botany Company.Entities:
Keywords: Araceae; biological invasions; boosted regression trees; invasiveness; predictions; stages of invasion; traits
Year: 2016 PMID: 26873404 PMCID: PMC4804228 DOI: 10.1093/aobpla/plw009
Source DB: PubMed Journal: AoB Plants Impact factor: 3.276
Summary of traits used as explanatory variables in the analyses for identifying potential drivers of invasiveness in Araceae. The number of species for which data were available is shown (out of a total of 3494 species). The range and median values for integer variables are shown in parentheses.
| Trait | Levels | Number of species | Type of variable |
|---|---|---|---|
| Introduction dynamics | Food source; medicine; fibre production; horticulture; agroforestry; phytoremediation | 546 | Categorical |
| Total number of uses | 546 | Integer (1–5; 1) | |
| Number of introduced regions (proxy for propagule pressure) | 514 | Integer (1–50; 1) | |
| Native range | 34 floristic native regions classified according to | 3490 | Categorical, binary |
| Total number of native regions (proxy for range size) | 3490 | Integer (1–31; 1) | |
| Habitat (desert and xeric shrubland; Mediterranean forests, woodland and scrub; temperate mixed forest; tropical dry forest; tropical moist forest) | 3494 | Categorical | |
| Biological traits | Pollinator type (bees; beetles; flies; combination) | 3250 | Categorical |
| Flower sexuality (bisexual; unisexual) | 3470 | Categorical, binary | |
| Regeneration mechanism (seed; vegetative; both) | 444 | Categorical | |
| Life form chamaephyte; epiphyte; geophyte; helophyte; hemicryptophyte; hemiepiphyte; hyrdophyte; lithophyte; phanerophyte | 3426 | Categorical |
Optimal parameter settings used in calibrating the BRTs that produced the best performing introduction–naturalization–invasion models. To reduce overfitting, we used cross-validation that was performed by splitting 75 % of the data for training the model and 25 % for testing. We tested various learning rates (0.1–0.0005), bag fractions (0.1–0.8) and levels of tree complexity (1–5). By trial and error, we determined the most effective algorithm parameters for our dataset, which is depicted below.
| Introduction model | Naturalization model | Invasion model | |
|---|---|---|---|
| Sample size ( | |||
| Full dataset | 3494 | 514 | 46 |
| Training data | 2621 | 386 | – |
| Test data | 873 | 128 | – |
| Parameters | |||
| Learning rate | 0.001 | 0.001 | 0.001 |
| Tree complexity | 3 | 3 | 3 |
| Bag fraction | 0.5 | 0.5 | 0.75 |
Figure 1.Numbers of Araceae species at different stages along the introduction–naturalization–invasion continuum. The selected plant life forms that are depicted here tend to be introduced more often.
Variables shown in the BRT analyses to have the greatest influence on the prediction of introduction, naturalization and invasion. The percentage contribution of a variable is based on the number of times the variable is selected for splitting, weighted by the squared improvement to the model as a result of each split and averaged over all trees. For each model, the contribution of the variables is scaled to add up to 100 %, with higher numbers indicating stronger influence on the response.
| Model | Variable | Percentage contribution |
|---|---|---|
| Introduction | Number of native regions | 30.00 |
| Life form | 26.00 | |
| Pollinator type | 17.70 | |
| Species native to Polynesia | 9.90 | |
| Flower sexuality | 8.20 | |
| Habitat | 8.20 | |
| Naturalization | Number of introduced regions | 65.90 |
| Life form | 16.00 | |
| Habitat | 9.80 | |
| Number of uses | 8.30 | |
| Invasion | Life form | 48.90 |
| Number of introduced regions | 35.30 | |
| Pollinator type | 15.90 |
Figure 2.The relationship between the introduction status of Araceae species and the parameters found to have a significant effect using BRTs. (A) Invasive taxa have larger native range sizes. Native range size is measured here in terms of the number of floristic regions based on Good's (1974) classification. Araceae naturally occur in 34 of the 37 floristic regions. (B) Invasive species tend to have been introduced to more regions than naturalized species, and almost 90 % of species that have been introduced to only one region have not yet naturalized. (C) Species with unisexual flowers tend to have overcome more of the barriers to invasion than species with bisexual flowers. (D) Species with a broad range of uses have naturalized and become invasive more often. Six different categories of human usage were considered: food source, medicine, fibre production, horticulture, agroforestry and phytoremediation. (E) Different life forms varied in their importance at different stages of the invasion. (F) Species that were fly pollinated or had a combination of pollinator types were introduced and became invasive relatively more frequently than bee- or beetle-pollinated species. (G) Species native to Mediterranean and temperate mixed forests tend to naturalize more often. There were few data on the human uses of species that had not been introduced outside their native range, and so this category was excluded. In (A and B), the box is the interquartile range, and the bold centre line is the median. Different letters denote different values using Tukey's multiple comparisons of means test. In (E–G), tests were done using the original data, though the panels actually show plots of the fitted functions produced by BRTs, which indicate the effect on species presence/absence across the INI stages (y-axes) by each predictor variable (x-axes). For the relative contribution of each variable to the total deviance explained, see Table 3. Grey panels indicate factors with low importance in the INI continuum, and therefore excluded from the model.
A list of potentially invasive Araceae species constructed from model-based statistical inferences (i.e. UPGMA phenograms). These species are placed into groupings that are based on evolutionary relatedness (i.e. monophyletic groups) and similar ecological traits. Phenograms are illustrated in .
| Monophyletic group | No. of species evaluated | No. of potentially high-risk species | Potentially invasive species list | Comments |
|---|---|---|---|---|
| 77 | 5 | High likelihood for the listed non-introduced and introduced species to become invasive | ||
| 82 | 38 | Most species in this group are not yet introduced; however, since this group already contains two invasive species, all species that are not listed requires further evaluation | ||
| 20 | 11 | One cluster contains the invasive | ||
| 2 | 1 | |||
| 55 | 23 | Many species require further evaluation. Risk assessments must be conducted prior to species introduction | ||
| 169 | ∼107 | See clusters marked with asterisks in | Large group with five naturalized, but not invasive, species and three invasive species scattered in the phenogram. All groups containing high-risk species need to be evaluated further | |
| 86 | 65 | All species that clusters with invasive species | Phenogram shows very little structure (i.e. many species nested within groups) because fewer informative traits were used. Nevertheless, a single cluster contains the naturalized and invasive species. Therefore, all species within this group pose an invasion risk | |
| 8 | 6 | High likelihood for non-introduced and introduced species to become invasive | ||
| 31 | 8 | Many invasive species in this group. The listed non-invasive species have a high invasion risk because they cluster with the invasive species |