Literature DB >> 26871312

Utilizing a Key Aptamer Structure-Switching Mechanism for the Ultrahigh Frequency Detection of Cocaine.

Miguel A D Neves1, Christophe Blaszykowski2, Michael Thompson1,2.   

Abstract

Aptasensing of small molecules remains a challenge as detection often requires the use of labels or signal amplification methodologies, resulting in both difficult-to-prepare sensor platforms and multistep, complex assays. Furthermore, many aptasensors rely on the binding mechanism or structural changes associated with target capture by the aptameric probe, resulting in a detection scheme customized to each aptamer. It is in this context that we report herein a sensitive cocaine aptasensor that offers both real-time and label-free measurement capabilities. Detection relies on the electromagnetic piezoelectric acoustic sensor (EMPAS) platform. The sensing interface consists of a S-(11-trichlorosilyl-undecanyl)benzenethiosulfonate (BTS) adlayer-coated quartz disc onto which a structure-switching cocaine aptamer (MN6) is immobilized, completing the preparation of the MN6 cocaine aptasensor (M6CA). The EMPAS system has recently been employed as the foundation of a cocaine aptasensor based on a structurally rigid cocaine aptamer variant (MN4), an aptasensor referred to by analogy as M4CA. M6CA represents a significant increase in terms of analytical performance, compared to not only M4CA but also other cocaine aptamer-based sensors that do not rely on signal amplification, producing an apparent K(d) of 27 ± 6 μM and a 0.3 μM detection limit. Remarkably, the latter is in the range of that achieved by cocaine aptasensors relying on signal amplification. Furthermore, M6CA proved to be capable not only of regaining its cocaine-binding ability via simple buffer flow over the sensing interface (i.e., without the necessity to implement an additional regeneration step, such as in the case of M4CA), but also of detecting cocaine in a multicomponent matrix possessing potentially assay-interfering species. Finally, through observation of the distinct shape of its response profiles to cocaine injection, demonstration was made that the EMPAS system in practice offers the possibility to distinguish between the binding mechanisms of structure-switching (MN6) vs rigid (MN4) aptameric probes, an ability that could allow the EMPAS to provide a more universal aptasensing platform than what is ordinarily observed in the literature.

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Year:  2016        PMID: 26871312     DOI: 10.1021/acs.analchem.5b04010

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  4 in total

1.  Salt-mediated two-site ligand binding by the cocaine-binding aptamer.

Authors:  Miguel A D Neves; Sladjana Slavkovic; Zachary R Churcher; Philip E Johnson
Journal:  Nucleic Acids Res       Date:  2017-02-17       Impact factor: 16.971

2.  Electrified Soft Interface as a Selective Sensor for Cocaine Detection in Street Samples.

Authors:  Lukasz Poltorak; Irene Eggink; Marnix Hoitink; Ernst J R Sudhölter; Marcel de Puit
Journal:  Anal Chem       Date:  2018-05-31       Impact factor: 6.986

3.  DNA binding by the antimalarial compound artemisinin.

Authors:  Sladjana Slavkovic; Aron A Shoara; Zachary R Churcher; Elise Daems; Karolien de Wael; Frank Sobott; Philip E Johnson
Journal:  Sci Rep       Date:  2022-01-07       Impact factor: 4.379

4.  A nanoporous gold-based electrochemical aptasensor for sensitive detection of cocaine.

Authors:  Nahid Tavakkoli; Nasrin Soltani; Fatemeh Mohammadi
Journal:  RSC Adv       Date:  2019-05-07       Impact factor: 3.361

  4 in total

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