Literature DB >> 26871126

Self-propulsion and interactions of catalytic particles in a chemically active medium.

Edward J Banigan1, John F Marko1,2.   

Abstract

Enzymatic "machines," such as catalytic rods or colloids, can self-propel and interact by generating gradients of their substrates. We theoretically investigate the behaviors of such machines in a chemically active environment where their catalytic substrates are continuously synthesized and destroyed, as occurs in living cells. We show how the kinetic properties of the medium modulate self-propulsion and pairwise interactions between machines, with the latter controlled by a tunable characteristic interaction range analogous to the Debye screening length in an electrolytic solution. Finally, we discuss the effective force arising between interacting machines and possible biological applications, such as partitioning of bacterial plasmids.

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Year:  2016        PMID: 26871126      PMCID: PMC4774268          DOI: 10.1103/PhysRevE.93.012611

Source DB:  PubMed          Journal:  Phys Rev E        ISSN: 2470-0045            Impact factor:   2.529


  39 in total

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Authors: 
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Authors:  A E Carlsson
Journal:  Phys Rev Lett       Date:  2004-06-10       Impact factor: 9.161

3.  Dynamics of self-propelled nanomotors in chemically active media.

Authors:  Snigdha Thakur; Raymond Kapral
Journal:  J Chem Phys       Date:  2011-07-14       Impact factor: 3.488

4.  Dynamic clustering in active colloidal suspensions with chemical signaling.

Authors:  I Theurkauff; C Cottin-Bizonne; J Palacci; C Ybert; L Bocquet
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5.  Enzyme molecules as nanomotors.

Authors:  Samudra Sengupta; Krishna K Dey; Hari S Muddana; Tristan Tabouillot; Michael E Ibele; Peter J Butler; Ayusman Sen
Journal:  J Am Chem Soc       Date:  2013-01-22       Impact factor: 15.419

6.  Dynamic clustering and chemotactic collapse of self-phoretic active particles.

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Journal:  Phys Rev Lett       Date:  2014-06-10       Impact factor: 9.161

Review 7.  Surfing biological surfaces: exploiting the nucleoid for partition and transport in bacteria.

Authors:  Anthony G Vecchiarelli; Kiyoshi Mizuuchi; Barbara E Funnell
Journal:  Mol Microbiol       Date:  2012-09-19       Impact factor: 3.501

8.  The heat released during catalytic turnover enhances the diffusion of an enzyme.

Authors:  Clement Riedel; Ronen Gabizon; Christian A M Wilson; Kambiz Hamadani; Konstantinos Tsekouras; Susan Marqusee; Steve Pressé; Carlos Bustamante
Journal:  Nature       Date:  2014-12-10       Impact factor: 49.962

9.  ATP control of dynamic P1 ParA-DNA interactions: a key role for the nucleoid in plasmid partition.

Authors:  Anthony G Vecchiarelli; Yong-Woon Han; Xin Tan; Michiyo Mizuuchi; Rodolfo Ghirlando; Christian Biertümpfel; Barbara E Funnell; Kiyoshi Mizuuchi
Journal:  Mol Microbiol       Date:  2010-07-27       Impact factor: 3.501

10.  Substrate catalysis enhances single-enzyme diffusion.

Authors:  Hari S Muddana; Samudra Sengupta; Thomas E Mallouk; Ayusman Sen; Peter J Butler
Journal:  J Am Chem Soc       Date:  2010-02-24       Impact factor: 15.419

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  4 in total

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2.  Brownian Ratchet Mechanism for Faithful Segregation of Low-Copy-Number Plasmids.

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Review 3.  Perspective: a stirring role for metabolism in cells.

Authors:  José Losa; Simeon Leupold; Diego Alonso-Martinez; Petteri Vainikka; Sebastian Thallmair; Katarzyna M Tych; Siewert J Marrink; Matthias Heinemann
Journal:  Mol Syst Biol       Date:  2022-04       Impact factor: 11.429

4.  Regulation of Pom cluster dynamics in Myxococcus xanthus.

Authors:  Silke Bergeler; Erwin Frey
Journal:  PLoS Comput Biol       Date:  2018-08-13       Impact factor: 4.475

  4 in total

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