Literature DB >> 26870502

Crystal structure of 4-{2-[4-(di-methyl-amino)-phen-yl]diazen-1-yl}-1-methyl-pyridinium iodide.

Katherine Chulvi1, Ana Costero1, Luis E Ochando1, Pablo Gaviña1.   

Abstract

The mol-ecular geometry of the ionic title compound, C14H17N4 (+)·I(-) or DAZOP(+)·I(-), is essentially featureless. Regarding the crystal structure, in addition to the obvious cation-anion Coulombic inter-actions, the packing is mostly directed by non-covalent inter-actions involving both ring systems, as well as the iodide anion. It consists of cationic mol-ecules aligned along [101] and disposed in an anti-parallel fashion while linked into π-bonded dimeric entities by a stacking contact involving symmetry-related phenyl rings, with a centroid-centroid distance of 3.468 (3) Å and a slippage of 0.951 Å. The dimers are, in addition, sustained by a number of C-H⋯I and I⋯π (I⋯centroid = 3.876 Å) inter-actions involving the anion. Finally, inter-dimeric contacts are of the C-H⋯I and C-H⋯π types.

Entities:  

Keywords:  C—H⋯ π inter­actions; I⋯π inter­action; NLO; [DAZOP+][I−]; crystal structure; dye; π–π inter­action

Year:  2015        PMID: 26870502      PMCID: PMC4719983          DOI: 10.1107/S2056989015023646

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the synthesis of precursors, see: Li et al. (1995 ▸). For spectroscopic properties of the title compound, see: Gonbeau et al. (1999 ▸). For general infomation on non-linear optical materials, see: Coradin et al. (1997 ▸); Mestechkin (2001 ▸); Nunzi et al. (2008 ▸). For general infomation on new photonic materials, see: Yu et al. (2013 ▸). For related structures, see: Cristian et al. (2004 ▸); Evans et al. (2001 ▸); Xu et al. (2012 ▸).

Experimental

Crystal data

C14H17N4 +·I− M = 368.21 Monoclinic, a = 18.0508 (14) Å b = 7.2790 (5) Å c = 11.3760 (9) Å β = 98.929 (7)° V = 1476.60 (19) Å3 Z = 4 Mo Kα radiation μ = 2.16 mm−1 T = 296 K 0.14 × 0.08 × 0.03 mm

Data collection

Agilent Xcalibur Sapphire3 Gemini diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2009 ▸) T min = 0.908, T max = 1.000 5694 measured reflections 2591 independent reflections 1642 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.065 S = 0.78 2591 reflections 175 parameters 132 restraints H-atom parameters constrained Δρmax = 1.00 e Å−3 Δρmin = −0.51 e Å−3

Data collection: CrysAlis PRO (Agilent, 2009 ▸); cell refinement: CrysAlis PRO); data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸); software used to prepare material for publication: WinGX (Farrugia, 2012 ▸). Crystal structure: contains datablock(s) I, shelx. DOI: 10.1107/S2056989015023646/bg2576sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015023646/bg2576Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015023646/bg2576Isup3.cml Click here for additional data file. x y z . DOI: 10.1107/S2056989015023646/bg2576fig1.tif The mol­ecular structure of (I),showing the atom-labelling scheme as well as the dimer formation. Displacement ellipsoids drawn at the 50% probability level. Symmetry codes: (i): 1 − x, 1 − y, 2 − z. CCDC reference: 1441443 Additional supporting information: crystallographic information; 3D view; checkCIF report
C14H17N4+·IF(000) = 728
Mr = 368.21Dx = 1.656 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 18.0508 (14) ÅCell parameters from 2009 reflections
b = 7.2790 (5) Åθ = 2.3–29.8°
c = 11.3760 (9) ŵ = 2.16 mm1
β = 98.929 (7)°T = 296 K
V = 1476.60 (19) Å3Plate, orange
Z = 40.14 × 0.08 × 0.03 mm
Agilent Xcalibur Sapphire3 Gemini diffractometer2591 independent reflections
Radiation source: Enhance (Mo) X-ray Source1642 reflections with I > 2σ(I)
Detector resolution: 16.0267 pixels mm-1Rint = 0.048
ω scansθmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2009)h = −21→17
Tmin = 0.908, Tmax = 1.000k = −6→8
5694 measured reflectionsl = −13→10
Refinement on F2132 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.065w = 1/[σ2(Fo2) + (0.0256P)2] where P = (Fo2 + 2Fc2)/3
S = 0.78(Δ/σ)max = 0.001
2591 reflectionsΔρmax = 1.00 e Å3
175 parametersΔρmin = −0.51 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.7113 (3)0.4360 (7)0.9607 (5)0.0253 (13)
H1A0.75740.41851.01400.038*
H1B0.69800.56390.95850.038*
H1C0.71730.39600.88240.038*
C20.6716 (3)0.2294 (6)1.1152 (5)0.0200 (13)
H2A0.72440.24171.14320.030*
H2B0.65930.10181.10300.030*
H2C0.64390.27961.17320.030*
N30.6522 (2)0.3295 (6)1.0020 (4)0.0184 (9)
C40.5810 (3)0.3369 (6)0.9457 (4)0.0129 (9)
C50.5610 (3)0.4377 (6)0.8383 (4)0.0152 (9)
H5A0.59780.50080.80580.018*
C60.5211 (3)0.2442 (6)0.9920 (5)0.0141 (10)
H6A0.53160.17821.06270.017*
C70.4886 (3)0.4430 (6)0.7824 (4)0.0155 (10)
H7A0.47730.51050.71250.019*
C80.4502 (3)0.2522 (6)0.9340 (5)0.0152 (10)
H8A0.41270.19080.96600.018*
C90.4305 (3)0.3502 (6)0.8265 (4)0.0131 (9)
N100.3607 (2)0.3636 (5)0.7569 (4)0.0180 (9)
N110.3082 (2)0.2693 (5)0.7907 (4)0.0215 (9)
C120.2413 (3)0.2902 (7)0.7100 (4)0.0198 (10)
C130.2268 (3)0.4246 (7)0.6216 (5)0.0219 (11)
H13A0.26250.51450.61500.026*
C140.1827 (3)0.1655 (7)0.7185 (5)0.0220 (11)
H14A0.18800.07990.77990.026*
C150.1614 (3)0.4251 (7)0.5455 (5)0.0211 (11)
H15A0.15270.51670.48810.025*
C160.1185 (3)0.1683 (7)0.6385 (5)0.0226 (10)
H16A0.08130.08190.64410.027*
N170.1081 (2)0.2955 (6)0.5508 (4)0.0184 (8)
C180.0410 (3)0.2872 (7)0.4591 (5)0.0260 (13)
H18A0.03470.40240.41780.039*
H18B−0.00230.26290.49610.039*
H18C0.04690.19080.40370.039*
I10.10101 (2)0.68987 (5)0.81084 (3)0.02305 (12)
U11U22U33U12U13U23
C10.0259 (19)0.028 (3)0.022 (3)−0.0084 (19)0.004 (2)0.003 (2)
C20.018 (3)0.021 (3)0.0204 (17)−0.001 (2)0.0039 (14)0.0044 (16)
N30.0204 (12)0.016 (2)0.0187 (16)−0.0011 (11)0.0036 (10)0.0014 (15)
C40.0196 (12)0.009 (2)0.0116 (15)0.0006 (11)0.0060 (10)−0.0040 (14)
C50.0206 (11)0.013 (2)0.0132 (15)0.0011 (13)0.0063 (11)−0.0014 (15)
C60.0208 (13)0.010 (2)0.0125 (18)−0.0006 (11)0.0069 (10)−0.0044 (15)
C70.0208 (11)0.012 (2)0.015 (2)0.0010 (12)0.0056 (10)−0.0012 (17)
C80.0212 (13)0.009 (2)0.0159 (15)−0.0013 (13)0.0056 (12)−0.0028 (14)
C90.0213 (11)0.005 (2)0.0140 (15)0.0020 (11)0.0076 (11)−0.0056 (13)
N100.0219 (11)0.017 (2)0.0161 (17)0.0021 (11)0.0066 (10)−0.0039 (14)
N110.0231 (11)0.022 (2)0.0211 (18)0.0007 (11)0.0073 (11)−0.0010 (14)
C120.0221 (12)0.0215 (19)0.0178 (17)0.0026 (12)0.0092 (12)−0.0038 (15)
C130.0215 (18)0.024 (2)0.0211 (19)0.0008 (14)0.0074 (14)−0.0008 (16)
C140.0211 (13)0.023 (2)0.023 (2)0.0027 (14)0.0053 (13)0.0022 (16)
C150.0223 (16)0.019 (2)0.023 (2)0.0016 (13)0.0062 (13)−0.0021 (16)
C160.0214 (16)0.024 (2)0.0232 (18)0.0021 (14)0.0048 (14)0.0031 (16)
N170.0208 (15)0.0174 (17)0.0178 (17)0.0030 (13)0.0056 (12)−0.0027 (13)
C180.0255 (18)0.027 (3)0.024 (2)−0.0005 (19)0.0002 (16)0.001 (2)
I10.0222 (2)0.0228 (2)0.0241 (2)−0.0007 (2)0.00320 (14)−0.0028 (2)
C1—N31.454 (6)C8—H8A0.9300
C1—H1A0.9600C9—N101.383 (6)
C1—H1B0.9600N10—N111.277 (5)
C1—H1C0.9600N11—C121.408 (6)
C2—N31.474 (6)C12—C131.398 (7)
C2—H2A0.9600C12—C141.408 (7)
C2—H2B0.9600C13—C151.351 (7)
C2—H2C0.9600C13—H13A0.9300
N3—C41.344 (6)C14—C161.358 (7)
C4—C51.423 (7)C14—H14A0.9300
C4—C61.442 (6)C15—N171.355 (6)
C5—C71.361 (6)C15—H15A0.9300
C5—H5A0.9300C16—N171.352 (6)
C6—C81.348 (7)C16—H16A0.9300
C6—H6A0.9300N17—C181.471 (6)
C7—C91.405 (6)C18—H18A0.9600
C7—H7A0.9300C18—H18B0.9600
C8—C91.413 (7)C18—H18C0.9600
N3—C1—H1A109.5N10—C9—C7115.2 (4)
N3—C1—H1B109.5N10—C9—C8128.0 (5)
H1A—C1—H1B109.5C7—C9—C8116.8 (5)
N3—C1—H1C109.5N11—N10—C9116.2 (4)
H1A—C1—H1C109.5N10—N11—C12110.4 (4)
H1B—C1—H1C109.5C13—C12—N11126.2 (5)
N3—C2—H2A109.5C13—C12—C14116.2 (5)
N3—C2—H2B109.5N11—C12—C14117.6 (5)
H2A—C2—H2B109.5C15—C13—C12120.6 (5)
N3—C2—H2C109.5C15—C13—H13A119.7
H2A—C2—H2C109.5C12—C13—H13A119.7
H2B—C2—H2C109.5C16—C14—C12121.1 (5)
C4—N3—C1121.2 (4)C16—C14—H14A119.5
C4—N3—C2121.1 (4)C12—C14—H14A119.5
C1—N3—C2117.3 (4)C13—C15—N17121.7 (5)
N3—C4—C5121.8 (4)C13—C15—H15A119.1
N3—C4—C6121.5 (4)N17—C15—H15A119.1
C5—C4—C6116.7 (5)N17—C16—C14120.7 (5)
C7—C5—C4120.9 (5)N17—C16—H16A119.6
C7—C5—H5A119.6C14—C16—H16A119.6
C4—C5—H5A119.6C16—N17—C15119.4 (5)
C8—C6—C4120.7 (5)C16—N17—C18120.0 (4)
C8—C6—H6A119.7C15—N17—C18120.6 (4)
C4—C6—H6A119.7N17—C18—H18A109.5
C5—C7—C9122.4 (5)N17—C18—H18B109.5
C5—C7—H7A118.8H18A—C18—H18B109.5
C9—C7—H7A118.8N17—C18—H18C109.5
C6—C8—C9122.5 (5)H18A—C18—H18C109.5
C6—C8—H8A118.7H18B—C18—H18C109.5
C9—C8—H8A118.7
C1—N3—C4—C54.8 (7)C8—C9—N10—N11−3.6 (7)
C2—N3—C4—C5178.0 (4)C9—N10—N11—C12−177.8 (4)
C1—N3—C4—C6−174.6 (4)N10—N11—C12—C13−14.3 (7)
C2—N3—C4—C6−1.4 (7)N10—N11—C12—C14166.1 (4)
N3—C4—C5—C7179.8 (4)N11—C12—C13—C15176.8 (5)
C6—C4—C5—C7−0.8 (7)C14—C12—C13—C15−3.6 (7)
N3—C4—C6—C8−179.6 (4)C13—C12—C14—C165.2 (7)
C5—C4—C6—C81.0 (7)N11—C12—C14—C16−175.2 (5)
C4—C5—C7—C9−0.3 (7)C12—C13—C15—N17−0.8 (8)
C4—C6—C8—C9−0.1 (7)C12—C14—C16—N17−2.3 (8)
C5—C7—C9—N10−177.6 (4)C14—C16—N17—C15−2.2 (7)
C5—C7—C9—C81.1 (7)C14—C16—N17—C18174.9 (5)
C6—C8—C9—N10177.6 (4)C13—C15—N17—C163.9 (7)
C6—C8—C9—C7−0.9 (7)C13—C15—N17—C18−173.3 (5)
C7—C9—N10—N11175.0 (4)
D—H···AD—HH···AD···AD—H···A
C1—H1A···I1i0.963.094.042 (6)173
C2—H2A···I1i0.963.154.102 (5)169
C15—H15A···I1ii0.932.993.907 (5)171
C7—H7A···Cg2iii0.932.713.505 (5)143
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 is the centroid of the C12–C16/N17 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C1—H1A⋯I1i 0.963.094.042 (6)173
C2—H2A⋯I1i 0.963.154.102 (5)169
C15—H15A⋯I1ii 0.932.993.907 (5)171
C7—H7ACg2iii 0.932.713.505 (5)143

Symmetry codes: (i) ; (ii) ; (iii) .

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