| Literature DB >> 26870496 |
Hyun Sik Park1, Ji Yeon Ryu1, Junseong Lee1.
Abstract
The title compound, C5H11N5O, crystallized with two independent mol-ecules in the asymmetric unit. The two mol-ecules differ in the orientation of the 2-methyl-propan-2-ol unit, with the hy-droxy H atoms pointing in opposite directions. In the crystal, mol-ecules are linked via O-H⋯O and N-H⋯O hydrogen bonds, forming ribbons propagating along [10-1]. The ribbons are linked via N-H⋯N hydrogen bonds, forming a three-dimensional structure.Entities:
Keywords: 2-methylpropan-2-ol; 5-aminotetrazole; crystal structure; hydrogen bonding
Year: 2015 PMID: 26870496 PMCID: PMC4719977 DOI: 10.1107/S2056989015023713
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C5H11N5O | |
| Triclinic, | |
| Mo | |
| Cell parameters from 4382 reflections | |
| θ = 2.0–29.9° | |
| α = 90.30 (1)° | µ = 0.10 mm−1 |
| β = 96.228 (10)° | |
| γ = 96.259 (10)° | Block, colourless |
| 0.12 × 0.10 × 0.08 mm |
| Bruker SMART 1K CCD diffractometer | 2953 independent reflections |
| Radiation source: fine-focus sealed tube | 2148 reflections with |
| Graphite monochromator | |
| profile data from ω scans | θmax = 25.5°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 11190 measured reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2953 reflections | Δρmax = 0.17 e Å−3 |
| 227 parameters | Δρmin = −0.19 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| O1 | 0.28249 (16) | 0.86314 (15) | 0.81161 (14) | 0.0536 (4) | |
| H1O | 0.270 (3) | 0.952 (3) | 0.789 (3) | 0.101 (9)* | |
| N1 | 0.4219 (2) | 0.6570 (2) | 1.28100 (17) | 0.0530 (5) | |
| H1A | 0.527 (3) | 0.690 (2) | 1.315 (2) | 0.063 (7)* | |
| H1B | 0.378 (2) | 0.592 (2) | 1.3251 (19) | 0.048 (6)* | |
| N2 | 0.48661 (17) | 0.69286 (15) | 1.05833 (15) | 0.0405 (4) | |
| N3 | 0.40258 (18) | 0.64638 (14) | 0.94250 (14) | 0.0383 (4) | |
| N4 | 0.26829 (19) | 0.56520 (15) | 0.95690 (15) | 0.0463 (4) | |
| N5 | 0.25930 (18) | 0.55592 (16) | 1.08764 (15) | 0.0458 (4) | |
| C1 | 0.3924 (2) | 0.63485 (18) | 1.14668 (18) | 0.0376 (4) | |
| C2 | 0.4501 (2) | 0.68157 (18) | 0.80986 (18) | 0.0456 (5) | |
| H2A | 0.3810 | 0.6223 | 0.7440 | 0.055* | |
| H2B | 0.5624 | 0.6622 | 0.8062 | 0.055* | |
| C3 | 0.4370 (2) | 0.83230 (18) | 0.77215 (18) | 0.0432 (5) | |
| C4 | 0.5765 (2) | 0.9290 (2) | 0.8434 (2) | 0.0572 (6) | |
| H4A | 0.5651 | 1.0223 | 0.8165 | 0.086* | |
| H4B | 0.6794 | 0.9034 | 0.8208 | 0.086* | |
| H4C | 0.5732 | 0.9226 | 0.9380 | 0.086* | |
| C5 | 0.4359 (3) | 0.8413 (2) | 0.6213 (2) | 0.0730 (7) | |
| H5A | 0.3447 | 0.7815 | 0.5786 | 0.110* | |
| H5B | 0.5363 | 0.8133 | 0.5957 | 0.110* | |
| H5C | 0.4260 | 0.9348 | 0.5945 | 0.110* | |
| O2 | 0.24050 (17) | 0.15721 (15) | 0.77069 (15) | 0.0509 (4) | |
| H2O | 0.301 (4) | 0.198 (3) | 0.831 (3) | 0.131 (13)* | |
| N6 | 0.0533 (3) | 0.3192 (2) | 0.24056 (16) | 0.0523 (5) | |
| H6A | −0.054 (3) | 0.283 (2) | 0.214 (2) | 0.065 (7)* | |
| H6B | 0.093 (2) | 0.377 (2) | 0.191 (2) | 0.057 (7)* | |
| N7 | 0.00343 (18) | 0.29922 (16) | 0.46818 (14) | 0.0436 (4) | |
| N8 | 0.09725 (18) | 0.34753 (14) | 0.57877 (14) | 0.0382 (4) | |
| N9 | 0.23381 (19) | 0.42091 (16) | 0.55631 (15) | 0.0505 (4) | |
| N10 | 0.23478 (19) | 0.42088 (17) | 0.42439 (15) | 0.0516 (5) | |
| C6 | 0.0940 (2) | 0.34662 (18) | 0.37369 (17) | 0.0377 (4) | |
| C7 | 0.0495 (2) | 0.32626 (18) | 0.71339 (17) | 0.0416 (5) | |
| H7A | −0.0649 | 0.3416 | 0.7126 | 0.050* | |
| H7B | 0.1138 | 0.3952 | 0.7729 | 0.050* | |
| C8 | 0.0714 (2) | 0.18313 (18) | 0.76967 (17) | 0.0386 (4) | |
| C9 | 0.0260 (3) | 0.1839 (2) | 0.9121 (2) | 0.0652 (7) | |
| H9A | 0.0504 | 0.0992 | 0.9542 | 0.098* | |
| H9B | −0.0891 | 0.1923 | 0.9108 | 0.098* | |
| H9C | 0.0881 | 0.2607 | 0.9610 | 0.098* | |
| C10 | −0.0294 (3) | 0.0686 (2) | 0.6850 (2) | 0.0573 (6) | |
| H10A | 0.0133 | 0.0630 | 0.6005 | 0.086* | |
| H10B | −0.1416 | 0.0880 | 0.6710 | 0.086* | |
| H10C | −0.0237 | −0.0178 | 0.7298 | 0.086* |
| O1 | 0.0434 (8) | 0.0474 (9) | 0.0716 (10) | 0.0081 (7) | 0.0097 (7) | 0.0127 (7) |
| N1 | 0.0503 (12) | 0.0632 (12) | 0.0421 (11) | −0.0055 (10) | 0.0018 (9) | 0.0068 (9) |
| N2 | 0.0397 (9) | 0.0411 (9) | 0.0389 (9) | 0.0004 (7) | 0.0010 (7) | 0.0029 (7) |
| N3 | 0.0432 (9) | 0.0329 (8) | 0.0379 (9) | 0.0030 (7) | 0.0023 (7) | 0.0032 (7) |
| N4 | 0.0500 (10) | 0.0425 (9) | 0.0436 (10) | −0.0031 (8) | 0.0008 (7) | 0.0055 (7) |
| N5 | 0.0436 (10) | 0.0482 (10) | 0.0436 (10) | −0.0011 (8) | 0.0021 (7) | 0.0076 (7) |
| C1 | 0.0356 (10) | 0.0374 (10) | 0.0395 (11) | 0.0052 (8) | 0.0015 (8) | 0.0049 (8) |
| C2 | 0.0558 (12) | 0.0436 (11) | 0.0389 (11) | 0.0073 (9) | 0.0095 (9) | 0.0002 (9) |
| C3 | 0.0446 (11) | 0.0401 (11) | 0.0454 (11) | 0.0035 (9) | 0.0083 (9) | 0.0069 (9) |
| C4 | 0.0513 (13) | 0.0492 (13) | 0.0705 (15) | −0.0013 (10) | 0.0098 (11) | 0.0077 (11) |
| C5 | 0.0948 (19) | 0.0761 (17) | 0.0485 (13) | 0.0069 (14) | 0.0111 (13) | 0.0190 (12) |
| O2 | 0.0433 (8) | 0.0501 (9) | 0.0586 (10) | 0.0054 (7) | 0.0015 (7) | 0.0067 (7) |
| N6 | 0.0598 (12) | 0.0577 (12) | 0.0362 (10) | −0.0039 (10) | 0.0007 (9) | 0.0061 (8) |
| N7 | 0.0432 (9) | 0.0492 (10) | 0.0355 (9) | −0.0032 (7) | −0.0013 (7) | 0.0030 (7) |
| N8 | 0.0410 (9) | 0.0374 (9) | 0.0347 (9) | 0.0003 (7) | 0.0010 (7) | 0.0052 (7) |
| N9 | 0.0506 (10) | 0.0563 (11) | 0.0403 (10) | −0.0081 (8) | −0.0015 (8) | 0.0093 (8) |
| N10 | 0.0489 (10) | 0.0637 (11) | 0.0390 (9) | −0.0062 (8) | 0.0027 (8) | 0.0102 (8) |
| C6 | 0.0413 (11) | 0.0361 (10) | 0.0357 (10) | 0.0051 (8) | 0.0030 (8) | 0.0059 (8) |
| C7 | 0.0529 (12) | 0.0379 (11) | 0.0348 (10) | 0.0059 (9) | 0.0078 (9) | 0.0018 (8) |
| C8 | 0.0396 (11) | 0.0383 (11) | 0.0380 (10) | 0.0031 (8) | 0.0056 (8) | 0.0049 (8) |
| C9 | 0.0835 (17) | 0.0633 (15) | 0.0513 (13) | 0.0076 (12) | 0.0191 (12) | 0.0159 (11) |
| C10 | 0.0582 (14) | 0.0447 (12) | 0.0648 (14) | −0.0055 (10) | −0.0005 (11) | 0.0037 (10) |
| O1—C3 | 1.437 (2) | O2—C8 | 1.443 (2) |
| O1—H1O | 0.91 (3) | O2—H2O | 0.82 (3) |
| N1—C1 | 1.362 (2) | N6—C6 | 1.366 (2) |
| N1—H1A | 0.92 (2) | N6—H6A | 0.93 (2) |
| N1—H1B | 0.844 (19) | N6—H6B | 0.82 (2) |
| N2—C1 | 1.333 (2) | N7—C6 | 1.328 (2) |
| N2—N3 | 1.342 (2) | N7—N8 | 1.339 (2) |
| N3—N4 | 1.310 (2) | N8—N9 | 1.308 (2) |
| N3—C2 | 1.466 (2) | N8—C7 | 1.464 (2) |
| N4—N5 | 1.332 (2) | N9—N10 | 1.332 (2) |
| N5—C1 | 1.349 (2) | N10—C6 | 1.347 (2) |
| C2—C3 | 1.529 (3) | C7—C8 | 1.528 (2) |
| C2—H2A | 0.9700 | C7—H7A | 0.9700 |
| C2—H2B | 0.9700 | C7—H7B | 0.9700 |
| C3—C4 | 1.518 (3) | C8—C10 | 1.515 (3) |
| C3—C5 | 1.524 (3) | C8—C9 | 1.524 (2) |
| C4—H4A | 0.9600 | C9—H9A | 0.9600 |
| C4—H4B | 0.9600 | C9—H9B | 0.9600 |
| C4—H4C | 0.9600 | C9—H9C | 0.9600 |
| C5—H5A | 0.9600 | C10—H10A | 0.9600 |
| C5—H5B | 0.9600 | C10—H10B | 0.9600 |
| C5—H5C | 0.9600 | C10—H10C | 0.9600 |
| C3—O1—H1O | 107.4 (15) | C8—O2—H2O | 113 (2) |
| C1—N1—H1A | 117.3 (13) | C6—N6—H6A | 116.9 (13) |
| C1—N1—H1B | 113.0 (14) | C6—N6—H6B | 114.9 (15) |
| H1A—N1—H1B | 114.2 (18) | H6A—N6—H6B | 115.5 (19) |
| C1—N2—N3 | 101.66 (14) | C6—N7—N8 | 101.56 (14) |
| N4—N3—N2 | 113.70 (14) | N9—N8—N7 | 114.12 (14) |
| N4—N3—C2 | 121.24 (15) | N9—N8—C7 | 122.32 (15) |
| N2—N3—C2 | 125.06 (14) | N7—N8—C7 | 123.51 (14) |
| N3—N4—N5 | 106.41 (14) | N8—N9—N10 | 105.90 (15) |
| N4—N5—C1 | 105.97 (13) | N9—N10—C6 | 106.18 (14) |
| N2—C1—N5 | 112.25 (16) | N7—C6—N10 | 112.23 (16) |
| N2—C1—N1 | 124.33 (17) | N7—C6—N6 | 124.23 (18) |
| N5—C1—N1 | 123.35 (16) | N10—C6—N6 | 123.49 (16) |
| N3—C2—C3 | 114.27 (14) | N8—C7—C8 | 114.86 (14) |
| N3—C2—H2A | 108.7 | N8—C7—H7A | 108.6 |
| C3—C2—H2A | 108.7 | C8—C7—H7A | 108.6 |
| N3—C2—H2B | 108.7 | N8—C7—H7B | 108.6 |
| C3—C2—H2B | 108.7 | C8—C7—H7B | 108.6 |
| H2A—C2—H2B | 107.6 | H7A—C7—H7B | 107.5 |
| O1—C3—C4 | 110.33 (16) | O2—C8—C10 | 106.22 (15) |
| O1—C3—C5 | 110.39 (16) | O2—C8—C9 | 109.55 (15) |
| C4—C3—C5 | 111.14 (16) | C10—C8—C9 | 112.03 (15) |
| O1—C3—C2 | 105.38 (14) | O2—C8—C7 | 109.61 (13) |
| C4—C3—C2 | 111.81 (16) | C10—C8—C7 | 112.28 (15) |
| C5—C3—C2 | 107.60 (16) | C9—C8—C7 | 107.14 (15) |
| C3—C4—H4A | 109.5 | C8—C9—H9A | 109.5 |
| C3—C4—H4B | 109.5 | C8—C9—H9B | 109.5 |
| H4A—C4—H4B | 109.5 | H9A—C9—H9B | 109.5 |
| C3—C4—H4C | 109.5 | C8—C9—H9C | 109.5 |
| H4A—C4—H4C | 109.5 | H9A—C9—H9C | 109.5 |
| H4B—C4—H4C | 109.5 | H9B—C9—H9C | 109.5 |
| C3—C5—H5A | 109.5 | C8—C10—H10A | 109.5 |
| C3—C5—H5B | 109.5 | C8—C10—H10B | 109.5 |
| H5A—C5—H5B | 109.5 | H10A—C10—H10B | 109.5 |
| C3—C5—H5C | 109.5 | C8—C10—H10C | 109.5 |
| H5A—C5—H5C | 109.5 | H10A—C10—H10C | 109.5 |
| H5B—C5—H5C | 109.5 | H10B—C10—H10C | 109.5 |
| C1—N2—N3—N4 | −0.60 (19) | C6—N7—N8—N9 | 1.0 (2) |
| C1—N2—N3—C2 | 178.59 (15) | C6—N7—N8—C7 | 178.36 (15) |
| N2—N3—N4—N5 | 0.2 (2) | N7—N8—N9—N10 | −1.1 (2) |
| C2—N3—N4—N5 | −178.98 (14) | C7—N8—N9—N10 | −178.47 (14) |
| N3—N4—N5—C1 | 0.23 (19) | N8—N9—N10—C6 | 0.6 (2) |
| N3—N2—C1—N5 | 0.74 (19) | N8—N7—C6—N10 | −0.5 (2) |
| N3—N2—C1—N1 | −176.40 (17) | N8—N7—C6—N6 | 177.00 (17) |
| N4—N5—C1—N2 | −0.6 (2) | N9—N10—C6—N7 | −0.1 (2) |
| N4—N5—C1—N1 | 176.53 (17) | N9—N10—C6—N6 | −177.61 (17) |
| N4—N3—C2—C3 | 110.47 (19) | N9—N8—C7—C8 | −104.44 (19) |
| N2—N3—C2—C3 | −68.7 (2) | N7—N8—C7—C8 | 78.4 (2) |
| N3—C2—C3—O1 | −44.3 (2) | N8—C7—C8—O2 | 57.7 (2) |
| N3—C2—C3—C4 | 75.5 (2) | N8—C7—C8—C10 | −60.1 (2) |
| N3—C2—C3—C5 | −162.14 (16) | N8—C7—C8—C9 | 176.52 (15) |
| H··· | ||||
| O1—H1 | 0.91 (3) | 2.04 (3) | 2.946 (2) | 171 (2) |
| N1—H1 | 0.92 (2) | 2.53 (2) | 3.243 (2) | 135 (2) |
| N1—H1 | 0.92 (2) | 2.58 (2) | 3.287 (3) | 134 (2) |
| N1—H1 | 0.84 (2) | 2.24 (2) | 3.082 (2) | 173 (2) |
| O2—H2 | 0.82 (3) | 2.14 (3) | 2.930 (2) | 162 (3) |
| N6—H6 | 0.93 (2) | 2.22 (2) | 3.114 (3) | 161 (2) |
| N6—H6 | 0.82 (2) | 2.41 (2) | 3.213 (2) | 167 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1 | 0.91 (3) | 2.04 (3) | 2.946 (2) | 171 (2) |
| N1—H1 | 0.92 (2) | 2.53 (2) | 3.243 (2) | 135 (2) |
| N1—H1 | 0.92 (2) | 2.58 (2) | 3.287 (3) | 134 (2) |
| N1—H1 | 0.84 (2) | 2.24 (2) | 3.082 (2) | 173 (2) |
| O2—H2 | 0.82 (3) | 2.14 (3) | 2.930 (2) | 162 (3) |
| N6—H6 | 0.93 (2) | 2.22 (2) | 3.114 (3) | 161 (2) |
| N6—H6 | 0.82 (2) | 2.41 (2) | 3.213 (2) | 167 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .