| Literature DB >> 26870491 |
Ming Yueh Tan1, Karen A Crouse1, Thahira Begum S A Ravoof1, Edward R T Tiekink2.
Abstract
In the title thio-semicarbazone compound, C18H18ClN3S, the CN3S residue is almost planar (r.m.s. deviation = 0.0031 Å) and forms dihedral angles of 65.99 (7) and 34.60 (10)° with the phenyl and chloro-benzene rings, respectively; the dihedral angle between the aromatic rings is 85.13 (8)°. The conformation about the C=N bond is Z, and that about the C=C bonds is E. The imine N and ethyl N atoms are syn and are linked by an eth-yl-imine N-H⋯N hydrogen bond. This H atom also forms an inter-molecular hydrogen bond to the thione S atom, resulting in a supra-molecular helical chain propagating along the b axis. The chains are consolidated into a three-dimensional architecture by phenyl-C-H⋯Cl contacts and weak π-π inter-actions between centrosymmetrically related chloro-benzene rings [inter-centroid distance = 3.9127 (15) Å].Entities:
Keywords: crystal structure; hydrogen bonding; thiosemicarbazone
Year: 2015 PMID: 26870491 PMCID: PMC4719972 DOI: 10.1107/S2056989015023531
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C18H18ClN3S | |
| Monoclinic, | Mo |
| Cell parameters from 2181 reflections | |
| θ = 2.9–27.5° | |
| µ = 0.33 mm−1 | |
| β = 90.196 (8)° | |
| Prism, light-brown | |
| 0.20 × 0.15 × 0.10 mm |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 4078 independent reflections |
| Radiation source: SuperNova (Mo) X-ray Source | 1963 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 27.5°, θmin = 2.9° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 11178 measured reflections |
| Refinement on | Hydrogen site location: mixed |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.20 e Å−3 | |
| 4078 reflections | Δρmin = −0.25 e Å−3 |
| 216 parameters | Extinction correction: |
| 2 restraints | Extinction coefficient: 0.0044 (7) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| S1 | 1.05835 (7) | −0.02341 (6) | 0.20649 (5) | 0.0606 (2) | |
| Cl1 | 0.48690 (8) | 0.72659 (6) | 0.71676 (5) | 0.0754 (3) | |
| N1 | 1.0584 (2) | 0.19712 (18) | 0.23053 (16) | 0.0579 (6) | |
| H1N | 1.025 (2) | 0.2566 (14) | 0.2562 (18) | 0.070* | |
| N2 | 0.9246 (2) | 0.09776 (16) | 0.32430 (15) | 0.0543 (6) | |
| H2N | 0.900 (2) | 0.0320 (11) | 0.3439 (17) | 0.065* | |
| N3 | 0.88627 (18) | 0.19560 (15) | 0.36594 (14) | 0.0484 (5) | |
| C1 | 1.0138 (2) | 0.0979 (2) | 0.25424 (18) | 0.0470 (6) | |
| C2 | 1.1491 (2) | 0.2179 (2) | 0.1541 (2) | 0.0636 (8) | |
| H2A | 1.2065 | 0.1553 | 0.1494 | 0.076* | |
| H2B | 1.1986 | 0.2832 | 0.1699 | 0.076* | |
| C3 | 1.0860 (3) | 0.2351 (4) | 0.0601 (2) | 0.1085 (13) | |
| H3A | 1.0393 | 0.1696 | 0.0431 | 0.163* | |
| H3B | 1.1485 | 0.2497 | 0.0121 | 0.163* | |
| H3C | 1.0292 | 0.2971 | 0.0643 | 0.163* | |
| C4 | 0.8004 (2) | 0.18918 (18) | 0.43172 (16) | 0.0420 (6) | |
| C5 | 0.7641 (2) | 0.29357 (18) | 0.47552 (16) | 0.0443 (6) | |
| H5 | 0.8101 | 0.3565 | 0.4592 | 0.053* | |
| C6 | 0.6697 (2) | 0.30579 (18) | 0.53736 (16) | 0.0434 (6) | |
| H6 | 0.6254 | 0.2419 | 0.5537 | 0.052* | |
| C7 | 0.6281 (2) | 0.40943 (18) | 0.58244 (16) | 0.0409 (6) | |
| C8 | 0.5030 (2) | 0.42061 (19) | 0.61122 (16) | 0.0463 (6) | |
| H8 | 0.4477 | 0.3614 | 0.6026 | 0.056* | |
| C9 | 0.4589 (3) | 0.5176 (2) | 0.65233 (16) | 0.0517 (7) | |
| H9 | 0.3749 | 0.5240 | 0.6708 | 0.062* | |
| C10 | 0.5415 (3) | 0.60409 (19) | 0.66531 (16) | 0.0504 (7) | |
| C11 | 0.6661 (3) | 0.5955 (2) | 0.63902 (18) | 0.0576 (7) | |
| H11 | 0.7209 | 0.6548 | 0.6489 | 0.069* | |
| C12 | 0.7099 (3) | 0.49840 (19) | 0.59786 (18) | 0.0529 (7) | |
| H12 | 0.7943 | 0.4925 | 0.5804 | 0.063* | |
| C41 | 0.7411 (2) | 0.08309 (17) | 0.46264 (17) | 0.0391 (6) | |
| C42 | 0.6659 (2) | 0.02282 (19) | 0.39972 (17) | 0.0446 (6) | |
| H42 | 0.6525 | 0.0488 | 0.3377 | 0.054* | |
| C43 | 0.6108 (2) | −0.07542 (19) | 0.42866 (19) | 0.0506 (7) | |
| H43 | 0.5608 | −0.1156 | 0.3860 | 0.061* | |
| C44 | 0.6294 (2) | −0.1139 (2) | 0.5200 (2) | 0.0550 (7) | |
| H44 | 0.5916 | −0.1799 | 0.5394 | 0.066* | |
| C45 | 0.7037 (2) | −0.0552 (2) | 0.58311 (19) | 0.0553 (7) | |
| H45 | 0.7163 | −0.0817 | 0.6450 | 0.066* | |
| C46 | 0.7597 (2) | 0.0428 (2) | 0.55490 (17) | 0.0491 (6) | |
| H46 | 0.8101 | 0.0821 | 0.5978 | 0.059* |
| S1 | 0.0614 (5) | 0.0544 (4) | 0.0661 (5) | 0.0084 (3) | 0.0204 (4) | −0.0080 (4) |
| Cl1 | 0.1222 (7) | 0.0502 (4) | 0.0539 (4) | 0.0289 (4) | 0.0068 (4) | −0.0074 (3) |
| N1 | 0.0567 (14) | 0.0503 (14) | 0.0670 (15) | −0.0007 (11) | 0.0263 (12) | 0.0014 (12) |
| N2 | 0.0638 (14) | 0.0380 (12) | 0.0614 (13) | 0.0005 (10) | 0.0292 (11) | −0.0016 (11) |
| N3 | 0.0531 (12) | 0.0375 (11) | 0.0548 (12) | 0.0017 (9) | 0.0176 (11) | −0.0023 (10) |
| C1 | 0.0433 (14) | 0.0470 (16) | 0.0506 (14) | 0.0010 (11) | 0.0098 (12) | −0.0017 (13) |
| C2 | 0.0500 (16) | 0.0699 (18) | 0.0710 (19) | −0.0065 (13) | 0.0207 (15) | 0.0061 (16) |
| C3 | 0.078 (2) | 0.172 (4) | 0.076 (2) | −0.021 (2) | 0.006 (2) | 0.031 (3) |
| C4 | 0.0426 (14) | 0.0386 (14) | 0.0450 (14) | −0.0014 (10) | 0.0090 (12) | −0.0001 (12) |
| C5 | 0.0482 (15) | 0.0349 (13) | 0.0500 (14) | −0.0011 (10) | 0.0094 (12) | −0.0001 (11) |
| C6 | 0.0465 (14) | 0.0378 (14) | 0.0459 (14) | −0.0015 (10) | 0.0062 (12) | −0.0017 (11) |
| C7 | 0.0491 (15) | 0.0368 (13) | 0.0368 (13) | 0.0022 (11) | 0.0066 (11) | 0.0014 (11) |
| C8 | 0.0537 (16) | 0.0411 (14) | 0.0442 (14) | 0.0000 (11) | 0.0115 (12) | 0.0051 (12) |
| C9 | 0.0611 (17) | 0.0494 (16) | 0.0448 (15) | 0.0155 (13) | 0.0141 (13) | 0.0075 (13) |
| C10 | 0.079 (2) | 0.0373 (14) | 0.0348 (13) | 0.0122 (13) | 0.0034 (13) | −0.0021 (12) |
| C11 | 0.0728 (19) | 0.0446 (16) | 0.0555 (16) | −0.0044 (13) | −0.0035 (15) | −0.0065 (14) |
| C12 | 0.0543 (17) | 0.0489 (16) | 0.0555 (16) | −0.0019 (12) | 0.0096 (13) | −0.0080 (13) |
| C41 | 0.0404 (13) | 0.0342 (13) | 0.0427 (14) | 0.0028 (10) | 0.0110 (11) | −0.0028 (11) |
| C42 | 0.0470 (15) | 0.0450 (14) | 0.0419 (13) | 0.0016 (11) | 0.0075 (12) | −0.0019 (12) |
| C43 | 0.0538 (16) | 0.0433 (14) | 0.0547 (17) | −0.0066 (12) | 0.0098 (13) | −0.0102 (13) |
| C44 | 0.0603 (17) | 0.0396 (14) | 0.0652 (18) | −0.0061 (12) | 0.0154 (15) | 0.0042 (14) |
| C45 | 0.0653 (18) | 0.0503 (16) | 0.0502 (15) | 0.0011 (13) | 0.0076 (14) | 0.0104 (14) |
| C46 | 0.0532 (16) | 0.0472 (15) | 0.0469 (15) | −0.0046 (12) | 0.0003 (12) | −0.0003 (13) |
| S1—C1 | 1.674 (2) | C7—C8 | 1.392 (3) |
| Cl1—C10 | 1.740 (2) | C7—C12 | 1.393 (3) |
| N1—C1 | 1.327 (3) | C8—C9 | 1.383 (3) |
| N1—C2 | 1.459 (3) | C8—H8 | 0.9300 |
| N1—H1N | 0.874 (10) | C9—C10 | 1.372 (4) |
| N2—C1 | 1.361 (3) | C9—H9 | 0.9300 |
| N2—N3 | 1.376 (2) | C10—C11 | 1.373 (4) |
| N2—H2N | 0.878 (10) | C11—C12 | 1.384 (3) |
| N3—C4 | 1.296 (2) | C11—H11 | 0.9300 |
| C2—C3 | 1.484 (4) | C12—H12 | 0.9300 |
| C2—H2A | 0.9700 | C41—C42 | 1.388 (3) |
| C2—H2B | 0.9700 | C41—C46 | 1.389 (3) |
| C3—H3A | 0.9600 | C42—C43 | 1.380 (3) |
| C3—H3B | 0.9600 | C42—H42 | 0.9300 |
| C3—H3C | 0.9600 | C43—C44 | 1.370 (3) |
| C4—C5 | 1.450 (3) | C43—H43 | 0.9300 |
| C4—C41 | 1.488 (3) | C44—C45 | 1.375 (4) |
| C5—C6 | 1.330 (3) | C44—H44 | 0.9300 |
| C5—H5 | 0.9300 | C45—C46 | 1.379 (3) |
| C6—C7 | 1.466 (3) | C45—H45 | 0.9300 |
| C6—H6 | 0.9300 | C46—H46 | 0.9300 |
| C1—N1—C2 | 124.9 (2) | C9—C8—C7 | 121.6 (2) |
| C1—N1—H1N | 119.5 (17) | C9—C8—H8 | 119.2 |
| C2—N1—H1N | 115.1 (17) | C7—C8—H8 | 119.2 |
| C1—N2—N3 | 120.56 (18) | C10—C9—C8 | 118.7 (2) |
| C1—N2—H2N | 115.5 (16) | C10—C9—H9 | 120.6 |
| N3—N2—H2N | 123.6 (16) | C8—C9—H9 | 120.6 |
| C4—N3—N2 | 117.15 (18) | C9—C10—C11 | 121.3 (2) |
| N1—C1—N2 | 115.3 (2) | C9—C10—Cl1 | 119.1 (2) |
| N1—C1—S1 | 125.86 (17) | C11—C10—Cl1 | 119.6 (2) |
| N2—C1—S1 | 118.80 (17) | C10—C11—C12 | 119.8 (2) |
| N1—C2—C3 | 112.0 (2) | C10—C11—H11 | 120.1 |
| N1—C2—H2A | 109.2 | C12—C11—H11 | 120.1 |
| C3—C2—H2A | 109.2 | C11—C12—C7 | 120.4 (2) |
| N1—C2—H2B | 109.2 | C11—C12—H12 | 119.8 |
| C3—C2—H2B | 109.2 | C7—C12—H12 | 119.8 |
| H2A—C2—H2B | 107.9 | C42—C41—C46 | 118.9 (2) |
| C2—C3—H3A | 109.5 | C42—C41—C4 | 120.5 (2) |
| C2—C3—H3B | 109.5 | C46—C41—C4 | 120.7 (2) |
| H3A—C3—H3B | 109.5 | C43—C42—C41 | 120.3 (2) |
| C2—C3—H3C | 109.5 | C43—C42—H42 | 119.8 |
| H3A—C3—H3C | 109.5 | C41—C42—H42 | 119.8 |
| H3B—C3—H3C | 109.5 | C44—C43—C42 | 120.2 (2) |
| N3—C4—C5 | 115.73 (19) | C44—C43—H43 | 119.9 |
| N3—C4—C41 | 123.63 (19) | C42—C43—H43 | 119.9 |
| C5—C4—C41 | 120.64 (18) | C43—C44—C45 | 120.1 (2) |
| C6—C5—C4 | 124.7 (2) | C43—C44—H44 | 119.9 |
| C6—C5—H5 | 117.6 | C45—C44—H44 | 119.9 |
| C4—C5—H5 | 117.6 | C44—C45—C46 | 120.2 (2) |
| C5—C6—C7 | 126.8 (2) | C44—C45—H45 | 119.9 |
| C5—C6—H6 | 116.6 | C46—C45—H45 | 119.9 |
| C7—C6—H6 | 116.6 | C45—C46—C41 | 120.2 (2) |
| C8—C7—C12 | 118.1 (2) | C45—C46—H46 | 119.9 |
| C8—C7—C6 | 119.6 (2) | C41—C46—H46 | 119.9 |
| C12—C7—C6 | 122.3 (2) | ||
| C1—N2—N3—C4 | 179.6 (2) | C9—C10—C11—C12 | 0.5 (4) |
| C2—N1—C1—N2 | −176.5 (2) | Cl1—C10—C11—C12 | −179.8 (2) |
| C2—N1—C1—S1 | 3.9 (4) | C10—C11—C12—C7 | 0.3 (4) |
| N3—N2—C1—N1 | −0.2 (4) | C8—C7—C12—C11 | −1.2 (4) |
| N3—N2—C1—S1 | 179.39 (19) | C6—C7—C12—C11 | 178.8 (2) |
| C1—N1—C2—C3 | 87.9 (4) | N3—C4—C41—C42 | −65.7 (3) |
| N2—N3—C4—C5 | 178.8 (2) | C5—C4—C41—C42 | 114.7 (2) |
| N2—N3—C4—C41 | −0.9 (4) | N3—C4—C41—C46 | 114.5 (3) |
| N3—C4—C5—C6 | 173.2 (2) | C5—C4—C41—C46 | −65.2 (3) |
| C41—C4—C5—C6 | −7.1 (4) | C46—C41—C42—C43 | 0.0 (3) |
| C4—C5—C6—C7 | −179.0 (2) | C4—C41—C42—C43 | −179.9 (2) |
| C5—C6—C7—C8 | 152.8 (2) | C41—C42—C43—C44 | 0.3 (3) |
| C5—C6—C7—C12 | −27.2 (4) | C42—C43—C44—C45 | −0.4 (4) |
| C12—C7—C8—C9 | 1.3 (3) | C43—C44—C45—C46 | 0.1 (4) |
| C6—C7—C8—C9 | −178.7 (2) | C44—C45—C46—C41 | 0.2 (4) |
| C7—C8—C9—C10 | −0.4 (4) | C42—C41—C46—C45 | −0.2 (3) |
| C8—C9—C10—C11 | −0.5 (4) | C4—C41—C46—C45 | 179.6 (2) |
| C8—C9—C10—Cl1 | 179.87 (18) |
| H··· | ||||
| N1—H1 | 0.88 (2) | 2.25 (2) | 2.629 (3) | 106 (2) |
| N1—H1 | 0.88 (2) | 2.84 (2) | 3.693 (2) | 165 (2) |
| C43—H43···Cl1ii | 0.93 | 2.82 | 3.708 (3) | 160 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.88 (2) | 2.25 (2) | 2.629 (3) | 106 (2) |
| N1—H1 | 0.88 (2) | 2.84 (2) | 3.693 (2) | 165 (2) |
| C43—H43⋯Cl1ii | 0.93 | 2.82 | 3.708 (3) | 160 |
Symmetry codes: (i) ; (ii) .