Literature DB >> 26870489

Crystal structure of 2-amino-3-cyano-4-(4-meth-oxy-phen-yl)-4H-1-benzo-thieno[3,2-b]pyran.

Mohamed Bakhouch1, Mohamed El Yazidi1, Abdelali Kerbal1, Mohamed Saadi2, Lahcen El Ammari2.   

Abstract

The three fused five- and six-membered rings in the title compound, C19H14N2O2S, are virtually coplanar, with the maximum deviation from the mean plane being 0.060 (1) Å. This benzothieno[3,2-b]pyran ring system is nearly perpendic-ular to the plane of the 4-meth-oxy-phenyl ring, forming a dihedral angle of 83.65 (5)°. In the crystal, mol-ecules are linked by pairs of N-H⋯N hydrogen bonds into inversion dimers. The dimeric units are further connected by an N-H⋯O hydrogen bond into a tape running along the b axis. The tapes are linked together by C-H⋯N and π-π inter-actions [centroid-centroid distance = 3.7743 (8) Å], forming a three-dimensional network.

Entities:  

Keywords:  2-amino-4-aryl-4H-pyran; benzothino[3,2-b]pyran; crystal structure

Year:  2015        PMID: 26870489      PMCID: PMC4719970          DOI: 10.1107/S2056989015023464

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For biological properties of 2-amino-4-aryl-4H-pyran derivatives, see: Panda et al. (1997 ▸); Mungra et al. (2011 ▸). For the reactivity of (Z)-2-aryl­idenebenzo[b]thio­phen-3(2H)-ones (thio­aurones), see: Boughaleb et al. (2010 ▸, 2011 ▸); Bakhouch et al. (2015 ▸). For a related structure, see: Bakhouch et al. (2014 ▸).

Experimental

Crystal data

C19H14N2O2S M = 334.38 Triclinic, a = 6.0469 (3) Å b = 10.8135 (5) Å c = 13.3260 (6) Å α = 109.943 (2)° β = 93.226 (2)° γ = 95.439 (2)° V = 811.76 (7) Å3 Z = 2 Mo Kα radiation μ = 0.21 mm−1 T = 296 K 0.40 × 0.37 × 0.24 mm

Data collection

Bruker X8 APEX diffractometer 33610 measured reflections 4563 independent reflections 3683 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.123 S = 1.02 4563 reflections 217 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.26 e Å−3

Data collection: APEX2 (Bruker, 2009 ▸); cell refinement: SAINT (Bruker, 2009 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXT (Sheldrick, 2015a ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015b ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸); software used to prepare material for publication: PLATON (Spek, 2009 ▸) and publCIF (Westrip, 2010 ▸). Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015023464/is5436sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015023464/is5436Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015023464/is5436Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015023464/is5436fig1.tif The mol­ecular structure of the title compound with the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are represented as small circles. Click here for additional data file. . DOI: 10.1107/S2056989015023464/is5436fig2.tif A packing diagram of the title compound showing mol­ecules linked by hydrogen bonds (dashed blue lines) and a π–π inter­action (dashed green line). CCDC reference: 1440832 Additional supporting information: crystallographic information; 3D view; checkCIF report
C19H14N2O2SF(000) = 348
Mr = 334.38Dx = 1.368 Mg m3
Triclinic, P1Melting point: 515 K
a = 6.0469 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.8135 (5) ÅCell parameters from 4563 reflections
c = 13.3260 (6) Åθ = 2.1–29.6°
α = 109.943 (2)°µ = 0.21 mm1
β = 93.226 (2)°T = 296 K
γ = 95.439 (2)°Block, colourless
V = 811.76 (7) Å30.40 × 0.37 × 0.24 mm
Z = 2
Bruker X8 APEX diffractometer3683 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.030
Graphite monochromatorθmax = 29.6°, θmin = 2.1°
φ and ω scansh = −8→8
33610 measured reflectionsk = −15→15
4563 independent reflectionsl = −18→18
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039H-atom parameters constrained
wR(F2) = 0.123w = 1/[σ2(Fo2) + (0.0643P)2 + 0.197P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
4563 reflectionsΔρmax = 0.30 e Å3
217 parametersΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.9654 (2)0.25649 (14)0.46217 (11)0.0435 (3)
C21.1515 (3)0.27892 (17)0.53633 (13)0.0560 (4)
H21.18700.36000.59170.067*
C31.2798 (3)0.17813 (19)0.52500 (15)0.0630 (5)
H31.40410.19140.57350.076*
C41.2285 (3)0.05642 (19)0.44279 (15)0.0592 (4)
H41.3203−0.00960.43650.071*
C51.0432 (2)0.03195 (16)0.37019 (12)0.0481 (3)
H51.0082−0.05010.31590.058*
C60.9100 (2)0.13312 (13)0.38033 (10)0.0387 (3)
C70.7137 (2)0.13537 (12)0.31555 (10)0.0361 (3)
C80.6294 (2)0.25117 (12)0.34268 (10)0.0368 (3)
C90.4291 (2)0.27703 (12)0.28465 (10)0.0354 (2)
H90.31470.30140.33470.042*
C100.3425 (2)0.14569 (12)0.19663 (10)0.0351 (2)
C110.4390 (2)0.03198 (12)0.17479 (10)0.0376 (3)
C120.1396 (2)0.14023 (12)0.13670 (10)0.0389 (3)
C130.4803 (2)0.38855 (11)0.24049 (9)0.0347 (2)
C140.3445 (2)0.48861 (13)0.25600 (11)0.0425 (3)
H140.21990.48780.29370.051*
C150.3923 (3)0.58966 (14)0.21602 (13)0.0483 (3)
H150.30010.65630.22720.058*
C160.5767 (2)0.59197 (13)0.15942 (11)0.0435 (3)
C170.7125 (3)0.49179 (15)0.14233 (13)0.0496 (3)
H170.83620.49190.10400.060*
C180.6619 (2)0.39158 (14)0.18300 (12)0.0463 (3)
H180.75310.32440.17120.056*
C190.8083 (4)0.7080 (2)0.0723 (2)0.0811 (6)
H19A0.81280.78530.05220.122*
H19B0.93780.71550.12010.122*
H19C0.80650.63070.00940.122*
N10.3666 (2)−0.08499 (12)0.09804 (11)0.0568 (4)
H1A0.2477−0.09320.05670.068*
H1B0.4392−0.15180.09020.068*
N2−0.0263 (2)0.13768 (13)0.08954 (11)0.0548 (3)
O10.62572 (16)0.02236 (9)0.23233 (8)0.0432 (2)
O20.6139 (2)0.69683 (11)0.12427 (11)0.0626 (3)
S10.78335 (7)0.36908 (4)0.45395 (3)0.04948 (12)
U11U22U33U12U13U23
C10.0426 (7)0.0494 (7)0.0399 (6)−0.0059 (5)−0.0089 (5)0.0224 (6)
C20.0547 (9)0.0610 (9)0.0499 (8)−0.0129 (7)−0.0208 (7)0.0254 (7)
C30.0489 (9)0.0776 (11)0.0678 (10)−0.0069 (8)−0.0239 (8)0.0405 (9)
C40.0463 (8)0.0718 (11)0.0686 (10)0.0073 (7)−0.0116 (7)0.0387 (9)
C50.0443 (7)0.0536 (8)0.0508 (8)0.0039 (6)−0.0070 (6)0.0263 (6)
C60.0351 (6)0.0469 (7)0.0384 (6)−0.0032 (5)−0.0055 (5)0.0238 (5)
C70.0352 (6)0.0383 (6)0.0349 (6)−0.0018 (5)−0.0060 (5)0.0159 (5)
C80.0381 (6)0.0372 (6)0.0333 (5)−0.0011 (5)−0.0055 (5)0.0129 (5)
C90.0353 (6)0.0352 (6)0.0342 (6)0.0051 (4)−0.0008 (4)0.0106 (5)
C100.0335 (6)0.0351 (6)0.0358 (6)0.0025 (4)−0.0042 (4)0.0127 (5)
C110.0367 (6)0.0351 (6)0.0403 (6)0.0013 (5)−0.0084 (5)0.0148 (5)
C120.0393 (6)0.0357 (6)0.0385 (6)0.0094 (5)−0.0026 (5)0.0087 (5)
C130.0365 (6)0.0308 (5)0.0341 (6)0.0070 (4)−0.0023 (4)0.0080 (4)
C140.0394 (6)0.0439 (7)0.0437 (7)0.0148 (5)0.0046 (5)0.0121 (5)
C150.0497 (8)0.0405 (7)0.0572 (8)0.0210 (6)0.0018 (6)0.0166 (6)
C160.0502 (7)0.0343 (6)0.0475 (7)0.0082 (5)−0.0039 (6)0.0165 (5)
C170.0496 (8)0.0461 (7)0.0617 (9)0.0162 (6)0.0167 (7)0.0252 (7)
C180.0472 (7)0.0388 (6)0.0604 (8)0.0204 (6)0.0147 (6)0.0215 (6)
C190.0820 (14)0.0726 (12)0.1117 (17)0.0095 (10)0.0202 (13)0.0596 (13)
N10.0588 (8)0.0342 (6)0.0648 (8)0.0082 (5)−0.0296 (6)0.0061 (5)
N20.0480 (7)0.0517 (7)0.0530 (7)0.0193 (5)−0.0130 (5)0.0027 (6)
O10.0421 (5)0.0351 (4)0.0482 (5)0.0055 (4)−0.0155 (4)0.0119 (4)
O20.0705 (8)0.0488 (6)0.0832 (8)0.0155 (5)0.0089 (6)0.0395 (6)
S10.0563 (2)0.04306 (19)0.04101 (19)−0.00067 (15)−0.01393 (15)0.00898 (14)
C1—C21.4007 (19)C11—N11.3416 (16)
C1—C61.4011 (19)C11—O11.3612 (14)
C1—S11.7427 (15)C12—N21.1462 (17)
C2—C31.369 (3)C13—C181.3779 (19)
C2—H20.9300C13—C141.3867 (17)
C3—C41.389 (3)C14—C151.384 (2)
C3—H30.9300C14—H140.9300
C4—C51.382 (2)C15—C161.384 (2)
C4—H40.9300C15—H150.9300
C5—C61.394 (2)C16—O21.3717 (16)
C5—H50.9300C16—C171.3858 (19)
C6—C71.4349 (16)C17—C181.385 (2)
C7—C81.3385 (18)C17—H170.9300
C7—O11.3755 (14)C18—H180.9300
C8—C91.4997 (17)C19—O21.414 (2)
C8—S11.7382 (12)C19—H19A0.9600
C9—C101.5233 (16)C19—H19B0.9600
C9—C131.5265 (17)C19—H19C0.9600
C9—H90.9800N1—H1A0.8600
C10—C111.3594 (17)N1—H1B0.8600
C10—C121.4110 (16)
C2—C1—C6120.66 (14)N1—C11—O1110.43 (11)
C2—C1—S1127.61 (13)C10—C11—O1122.91 (11)
C6—C1—S1111.71 (10)N2—C12—C10178.75 (15)
C3—C2—C1118.14 (15)C18—C13—C14118.18 (12)
C3—C2—H2120.9C18—C13—C9120.75 (11)
C1—C2—H2120.9C14—C13—C9121.07 (12)
C2—C3—C4121.54 (14)C15—C14—C13120.76 (13)
C2—C3—H3119.2C15—C14—H14119.6
C4—C3—H3119.2C13—C14—H14119.6
C5—C4—C3121.02 (16)C16—C15—C14120.31 (12)
C5—C4—H4119.5C16—C15—H15119.8
C3—C4—H4119.5C14—C15—H15119.8
C4—C5—C6118.42 (15)O2—C16—C15116.47 (12)
C4—C5—H5120.8O2—C16—C17124.00 (14)
C6—C5—H5120.8C15—C16—C17119.52 (13)
C5—C6—C1120.21 (12)C18—C17—C16119.31 (13)
C5—C6—C7129.87 (13)C18—C17—H17120.3
C1—C6—C7109.91 (12)C16—C17—H17120.3
C8—C7—O1124.87 (11)C13—C18—C17121.91 (12)
C8—C7—C6115.62 (11)C13—C18—H18119.0
O1—C7—C6119.51 (11)C17—C18—H18119.0
C7—C8—C9124.73 (11)O2—C19—H19A109.5
C7—C8—S1111.22 (9)O2—C19—H19B109.5
C9—C8—S1124.05 (9)H19A—C19—H19B109.5
C8—C9—C10105.99 (10)O2—C19—H19C109.5
C8—C9—C13113.02 (10)H19A—C19—H19C109.5
C10—C9—C13112.31 (10)H19B—C19—H19C109.5
C8—C9—H9108.5C11—N1—H1A120.0
C10—C9—H9108.5C11—N1—H1B120.0
C13—C9—H9108.5H1A—N1—H1B120.0
C11—C10—C12117.49 (11)C11—O1—C7116.13 (10)
C11—C10—C9125.31 (11)C16—O2—C19118.42 (13)
C12—C10—C9117.12 (10)C8—S1—C191.51 (6)
N1—C11—C10126.65 (12)
D—H···AD—HH···AD···AD—H···A
N1—H1A···N2i0.862.183.0060 (17)160
N1—H1B···O2ii0.862.193.0158 (16)162
C18—H18···N2iii0.932.493.3997 (17)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯N2i 0.862.183.0060 (17)160
N1—H1B⋯O2ii 0.862.193.0158 (16)162
C18—H18⋯N2iii 0.932.493.3997 (17)165

Symmetry codes: (i) ; (ii) ; (iii) .

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