| Literature DB >> 26870468 |
Jamie C Gaitor1, Manuel Sanchez Zayas1, Darrel J Myrthil1, Frankie White2, Jeffrey M Hendrich2, Richard E Sykora2, Richard A O'Brien2, John T Reilly1, Arsalan Mirjafari1.
Abstract
The structure of 1-methyl-2-(prop-2-en-1-ylsulfan-yl)-1H-imidazol-3-ium bromide, C7H11N2S(+)·Br(-), has monoclinic (P21/c) symmetry. In the crystal, the components are linked by N-H⋯Br and C-H⋯Br hydrogen bonds. The crystal structure of the title compound undeniably proves that methimazole reacts through the thione tautomer, rather than the thiol tautomer in this system.Entities:
Keywords: S-allylation; crystal structure; ionic liquids; methimazole; nitrogen heterocycle
Year: 2015 PMID: 26870468 PMCID: PMC4719949 DOI: 10.1107/S2056989015022136
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C7H11N2S+·Br− | |
| Monoclinic, | Mo |
| Cell parameters from 2203 reflections | |
| θ = 3.9–27.0° | |
| µ = 4.24 mm−1 | |
| β = 104.006 (7)° | |
| Prism, colourless | |
| 0.6 × 0.32 × 0.25 mm |
| Agilent Xcalibur, Eos diffractometer | 1829 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 1558 reflections with |
| Graphite monochromator | |
| Detector resolution: 16.0514 pixels mm-1 | θmax = 25.3°, θmin = 3.2° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 7388 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1829 reflections | (Δ/σ)max = 0.001 |
| 105 parameters | Δρmax = 0.34 e Å−3 |
| 1 restraint | Δρmin = −0.38 e Å−3 |
| Experimental. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.70880 (3) | 0.66161 (4) | 0.53045 (2) | 0.02621 (12) | |
| N2 | 0.6562 (2) | 0.0414 (3) | 0.2392 (2) | 0.0273 (6) | |
| N1 | 0.6302 (2) | 0.1226 (3) | 0.39296 (18) | 0.0233 (6) | |
| C2 | 0.5297 (3) | 0.0739 (4) | 0.2258 (3) | 0.0316 (8) | |
| H2A | 0.4669 | 0.0623 | 0.1625 | 0.038* | |
| C3 | 0.5134 (3) | 0.1262 (4) | 0.3221 (3) | 0.0285 (7) | |
| H3 | 0.4371 | 0.1587 | 0.3376 | 0.034* | |
| C1 | 0.7171 (3) | 0.0704 (4) | 0.3410 (2) | 0.0234 (7) | |
| S1 | 0.87834 (8) | 0.04183 (11) | 0.39532 (7) | 0.0373 (2) | |
| C4 | 0.6547 (4) | 0.1637 (4) | 0.5076 (2) | 0.0370 (9) | |
| H4A | 0.5756 | 0.1749 | 0.5278 | 0.055* | |
| H4B | 0.7009 | 0.2750 | 0.5221 | 0.055* | |
| H4C | 0.7037 | 0.0681 | 0.5481 | 0.055* | |
| C6 | 0.9092 (3) | 0.3747 (4) | 0.3027 (3) | 0.0410 (9) | |
| H6 | 0.9450 | 0.3274 | 0.2498 | 0.049* | |
| C5 | 0.9322 (3) | 0.2790 (4) | 0.4066 (3) | 0.0405 (9) | |
| H5A | 0.8889 | 0.3429 | 0.4532 | 0.049* | |
| H5B | 1.0223 | 0.2818 | 0.4401 | 0.049* | |
| C7 | 0.8417 (3) | 0.5215 (5) | 0.2809 (3) | 0.0436 (9) | |
| H7A | 0.8047 | 0.5719 | 0.3323 | 0.052* | |
| H7B | 0.8305 | 0.5758 | 0.2141 | 0.052* | |
| H2 | 0.689 (3) | 0.007 (4) | 0.190 (2) | 0.049 (11)* |
| Br1 | 0.02573 (18) | 0.0284 (2) | 0.02529 (19) | −0.00350 (13) | 0.00772 (13) | −0.00185 (13) |
| N2 | 0.0309 (15) | 0.0295 (16) | 0.0227 (15) | 0.0016 (12) | 0.0088 (13) | −0.0005 (12) |
| N1 | 0.0304 (15) | 0.0165 (13) | 0.0238 (14) | −0.0003 (11) | 0.0081 (12) | 0.0002 (10) |
| C2 | 0.0256 (17) | 0.030 (2) | 0.0354 (19) | −0.0008 (14) | −0.0003 (15) | 0.0026 (15) |
| C3 | 0.0190 (16) | 0.0255 (18) | 0.041 (2) | 0.0028 (13) | 0.0064 (14) | 0.0023 (15) |
| C1 | 0.0253 (17) | 0.0180 (17) | 0.0264 (17) | −0.0015 (13) | 0.0057 (14) | 0.0027 (13) |
| S1 | 0.0229 (4) | 0.0335 (5) | 0.0518 (6) | 0.0031 (4) | 0.0019 (4) | 0.0112 (4) |
| C4 | 0.059 (2) | 0.028 (2) | 0.0254 (18) | −0.0016 (16) | 0.0128 (17) | −0.0035 (14) |
| C6 | 0.039 (2) | 0.045 (2) | 0.044 (2) | −0.0026 (17) | 0.0186 (18) | 0.0108 (18) |
| C5 | 0.0249 (18) | 0.040 (2) | 0.051 (2) | −0.0105 (15) | −0.0023 (16) | 0.0134 (17) |
| C7 | 0.049 (2) | 0.042 (2) | 0.037 (2) | 0.0000 (18) | 0.0056 (18) | 0.0126 (17) |
| N2—C2 | 1.366 (4) | C4—H4A | 0.9600 |
| N2—C1 | 1.334 (4) | C4—H4B | 0.9600 |
| N2—H2 | 0.836 (17) | C4—H4C | 0.9600 |
| N1—C3 | 1.373 (4) | C6—H6 | 0.9300 |
| N1—C1 | 1.338 (3) | C6—C5 | 1.480 (4) |
| N1—C4 | 1.465 (4) | C6—C7 | 1.304 (4) |
| C2—H2A | 0.9300 | C5—H5A | 0.9700 |
| C2—C3 | 1.349 (4) | C5—H5B | 0.9700 |
| C3—H3 | 0.9300 | C7—H7A | 0.9300 |
| C1—S1 | 1.736 (3) | C7—H7B | 0.9300 |
| S1—C5 | 1.847 (3) | ||
| C2—N2—H2 | 124 (2) | N1—C4—H4B | 109.5 |
| C1—N2—C2 | 109.9 (3) | N1—C4—H4C | 109.5 |
| C1—N2—H2 | 126 (2) | H4A—C4—H4B | 109.5 |
| C3—N1—C4 | 125.3 (3) | H4A—C4—H4C | 109.5 |
| C1—N1—C3 | 109.0 (2) | H4B—C4—H4C | 109.5 |
| C1—N1—C4 | 125.7 (3) | C5—C6—H6 | 118.1 |
| N2—C2—H2A | 126.7 | C7—C6—H6 | 118.1 |
| C3—C2—N2 | 106.7 (3) | C7—C6—C5 | 123.8 (3) |
| C3—C2—H2A | 126.7 | S1—C5—H5A | 108.8 |
| N1—C3—H3 | 126.3 | S1—C5—H5B | 108.8 |
| C2—C3—N1 | 107.3 (3) | C6—C5—S1 | 113.8 (2) |
| C2—C3—H3 | 126.3 | C6—C5—H5A | 108.8 |
| N2—C1—N1 | 107.1 (3) | C6—C5—H5B | 108.8 |
| N2—C1—S1 | 126.0 (2) | H5A—C5—H5B | 107.7 |
| N1—C1—S1 | 126.9 (2) | C6—C7—H7A | 120.0 |
| C1—S1—C5 | 100.68 (14) | C6—C7—H7B | 120.0 |
| N1—C4—H4A | 109.5 | H7A—C7—H7B | 120.0 |
| N2—C2—C3—N1 | −0.7 (3) | C1—N2—C2—C3 | 0.7 (4) |
| N2—C1—S1—C5 | 104.2 (3) | C1—N1—C3—C2 | 0.5 (3) |
| N1—C1—S1—C5 | −77.0 (3) | C1—S1—C5—C6 | −61.4 (3) |
| C2—N2—C1—N1 | −0.4 (3) | C4—N1—C3—C2 | −177.7 (3) |
| C2—N2—C1—S1 | 178.7 (2) | C4—N1—C1—N2 | 178.1 (3) |
| C3—N1—C1—N2 | −0.1 (3) | C4—N1—C1—S1 | −0.9 (4) |
| C3—N1—C1—S1 | −179.1 (2) | C7—C6—C5—S1 | 121.8 (3) |
| H··· | ||||
| N2—H2···Br1i | 0.84 (3) | 2.46 (3) | 3.246 (2) | 158 (3) |
| C2—H2 | 0.93 | 2.84 | 3.723 (4) | 159 |
| C3—H3···Br1iii | 0.93 | 2.91 | 3.757 (3) | 152 |
| C4—H4 | 0.96 | 2.87 | 3.737 (3) | 151 |
| C5—H5 | 0.97 | 2.89 | 3.814 (3) | 161 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2⋯Br1i | 0.84 (3) | 2.46 (3) | 3.246 (2) | 158 (3) |
| C2—H2 | 0.93 | 2.84 | 3.723 (4) | 159 |
| C3—H3⋯Br1iii | 0.93 | 2.91 | 3.757 (3) | 152 |
| C4—H4 | 0.96 | 2.87 | 3.737 (3) | 151 |
| C5—H5 | 0.97 | 2.89 | 3.814 (3) | 161 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .