Literature DB >> 26869802

Correlation between XRCC1 Arg399Gln genetic polymorphisms and susceptibility to bladder cancer: a meta-analysis.

Nannan Liu1, Xiawei Fei2, Yi Shen1, Weifeng Shi1, Jinhong Ma1.   

Abstract

The relationship between XRCC1 polymorphisms and bladder cancer has been widely studied. Here, our meta-analysis was conducted to evaluate the correlations between common genetic polymorphisms in XRCC1 and susceptibility to bladder cancer. In order to derive a more precise estimation of the association, 27 clinical case-control studies (which met all the inclusion criteria) were included in this meta-analysis. A total of 8,539 cancer cases and 10,750 controls were involved in this meta-analysis. Overall, no significant association was detected in allelic model (A allele vs T allele odds ratio [OR] =0.87, 95% confidence interval [CI], 0.71-1.06), homozygote comparison (AA vs GG OR =1.12, 95% CI, 0.68-1.85), heterozygote comparison (AT vs TT OR =1.01, 95% CI, 0.81-1.26), dominant model (AA + AG vs GG OR =0.93, 95% CI, 0.85-1.02), and recessive model (AA vs AG + GG OR =1.01, 95% CI, 0.88-1.15), but a moderately significant association was found for AG vs GG (OR =0.241, 95% CI =0.17-0.35). Subgroup analysis based on ethnicity. Ethnicity analysis suggested that genetic polymorphisms in XRCC1 were not correlated with increased bladder cancer risk among Asians (all P>0.05). Therefore, we concluded that XRCC1 genetic polymorphism may not contribute to bladder cancer susceptibility in the present meta-analysis, and further well-designed studies with a large sample size are warranted to validate our conclusion.

Entities:  

Keywords:  XRCC1; bladder cancer; genetic polymorphism; meta-analysis; susceptibility

Year:  2016        PMID: 26869802      PMCID: PMC4734791          DOI: 10.2147/OTT.S95658

Source DB:  PubMed          Journal:  Onco Targets Ther        ISSN: 1178-6930            Impact factor:   4.147


Introduction

Bladder cancer is one of the most common health problems worldwide, the seventh most common malignancy in men, and 17th most common in women.1 It is well-known that the most common risk factors for bladder cancer include tobacco smoking,2 occupational exposure to chemicals,3 and schistosomiasis.1 Whereas, epidemiological studies have shown that genetic variants at one or more loci result in reduced DNA repair capacity and an increased cancer risk.4–6 In addition, a large number of single nucleotide polymorphisms in common DNA repair genes have also been identified7 and confirmed to be associated with several sporadic cancers.8,9 XRCC1 is located on chromosome 19q13.2–13.310,11 with a length of 33 kb, and plays an essential role in DNA repair genes involved in base excision repair12 and single-strand breaks.13 To date, XRCC1 is the first cloned human gene associated with single-strand break repair14 and also related to sister-chromatid exchange.15 As previously described, there are three single nucleotide polymorphisms leads to amino acid substitutions in Arg194Trp in exon 6 (rs1799782), Arg280His in exon 9 (rs25489), and Arg399Gln in exon 10 (rs25487).16,17 Although several previous studies have evaluated the associations of XRCC1 polymorphisms with bladder cancer risk, the results are still inconsistent. In the present study, we performed a meta-analysis of all eligible studies to demonstrate the effect of XRCC1 Arg399Gln polymorphism on bladder cancer susceptibility.

Materials and methods

Identification of eligible studies

PubMed, Embase, and Web of Science databases were searched in our meta-analysis. Case-control studies of the XRCC1 Arg399Gln polymorphism and bladder cancer susceptibility published before June 1, 2015 were included by using the keywords: “XRCC1”, “X-ray repair cross-complementing group 1”, “Arg399Gln”, “polymorphism”, “bladder cancer”, and “urothelial carcinoma”. The search was limited to English language papers. All reference lists of reviews and retrieved articles were manually screened for further potential studies.

Inclusion and exclusion criteria

The following criteria were used to determine inclusion eligibility: 1) a study that evaluated the correlation of XRCC1 Arg399Gln polymorphisms with bladder cancer susceptibility; 2) case-control study design; 3) full-text published articles; 4) a study that included sufficient genotype data for extraction. Furthermore, articles that did not meet our inclusion criteria were excluded.

Data extraction

Information was extracted carefully from all eligible publications independently and in duplicate by two authors. The following data were collected from each study: the first author’s name, year of publication, country of origin, genotyping method, numbers of cases and controls, and evidence of Hardy-Weinberg equilibrium (HWE). The two authors reached consensus on each item.

Statistical analysis

The strength of association between the XRCC1 Arg399Gln polymorphism and bladder cancer was calculated by individual or pooled odds ratios (ORs) and 95% confidence intervals (CIs) using the STATA statistical software (Version 12.0, StataCorp LP, College Station, TX, USA). We evaluated the following comparisons to the XRCC1 Arg399Gln polymorphism including comparison of the variant allele with the wild-type allele (Gln allele vs Arg allele), the variant homozygote with the wild-type homozygote and the heterozygote (Gln/Gln vs Gln/Arg + Arg/Arg), the wild-type homozygote with the variant homozygote and the heterozygote (Arg/Arg vs Gln/Arg + Gln/Gln), and the variant homozygote with the heterozygote and wild-type homozygote (Gln/Gln vs Arg/Arg; Gln/Gln vs Gln/Arg). The statistical significance of the pooled ORs was assessed with the Z test and a P-value of <0.05 was considered significant. Chi-square-based Q test was conducted to measure the heterogeneity between eligible studies, and the existence of heterogeneity was considered significant if P<0.10.11 When the between-study heterogeneity was absent, a fixed-effect model (the Mantel–Haenszel method) was used to pool the data from different studies.18 Otherwise, a random-effect model (the DerSimonian and Laird method) was applied.19 To explore the source of heterogeneity among variables such as ethnicity, and HWE status, both subgroup analyses and logistic met regression analyses were performed.20 Funnel plots and Egger’s linear regression test were applied to investigate publication bias.21

Results

Study selection and description

A total of 27 eligible studies including 8,539 cases and 10,750 controls met the inclusion criteria. The HWE test was performed to determine the genotype distribution of the controls in all studies included. All of the studies, except for three,22–24 were not in HWE, and two studies25,26 lacked sufficient data for calculating the P-value to determine HWE.

Quantitative data synthesis

The study characteristics are summarized in Table 1. The genotype distribution and risk allele frequency of the included studies are summarized in Table 2. Overall, there was no significant correlation between the XRCC1 Arg399Gln polymorphism and bladder cancer risk for A allele vs G allele (OR =0.87, 95% CI =0.71–1.06, P=0.160 for heterogeneity, Figure 1A), the codominant model AA vs GG (OR =1.01, 95% CI =0.81–1.26, P=0.959 for heterogeneity, Figure 1B), the dominant model AA/AG vs GG (OR =0.93, 95% CI =0.85–1.02, P=0.134 for heterogeneity, Figure 1C), and the recessive model AA vs AG/GG (OR =1.01, 95% CI =0.88–1.15, P=0.934 for heterogeneity, Figure 1D), but a moderately significant association was found for AG vs GG (OR =0.241, 95% CI =0.17–0.35, P=0.000 for heterogeneity, Figure 2). In subgroup analysis by ethnicity, no significant association was found between XRCC1 Arg399Gln polymorphism and bladder cancer risk among Asians (P>0.05).
Table 1

Baseline characteristics of studies included in the meta-analysis

StudyYearCountryMethodNumber of subjects
CaseControls
Akhmadishina LZ et al332014RussianPCR-RFLP289173
Chien-I Chiang CI et al342014People’s Republic of ChinaPCR-RFLP324647
Volha P et al352014BelarusPCR-RFLP332364
Zhi Y et al362012People’s Republic of ChinaPCR-RFLP302311
Mittal RD et al372012IndiaARMS PCR212250
Gao W et al382012USAPCR+SSCP192313
Wang M et al392010People’s Republic of ChinaPCR-RFLP234253
Wen H et al262009People’s Republic of ChinaTaqMan assay80291
Mittal RD et al402008IndiaPCR-RFLP14090
Fontana L et al412008FranceTaqMan assay5145
Covolo L et al422008ItalyPCR-RFLP197211
Arizono K et al432008JapanPCR-RFLP251251
Andrew AS et al232008USAPCR-RFLP9901,253
Sak SC et al442007UKTaqMan assay532560
Huang M et al252007USATaqMan assay613696
Figueroa JD et al452007USATaqMan assay1,061996
Karahalil B et al462006TurkeyPCR-RFLP100100
Andrew AS et al472006USAPCR-RFLP306538
Matullo G et al312006ItalyPCR-RFLP1241,094
Wu X et al482006USATaqMan assay613596
Matullo G et al492005UKPCR-RFLP311312
Broberg K et al502005SwedenMass assay61155
Kelsey KT et al242004USAPCR-RFLP355544
Sanyal S et al512004SwedenPCR-RFLP311246
Shen M et al282003FrancePCR-RFLP201214
Matullo G et al522001ItalyPCR-RFLP12437
Stern MC et al272001USAPCR-RFLP233210

Abbreviations: PCR-RFLP, polymerase chain reaction-restriction fragment length polymorphism; AMRS PCR, amplification refractory mutation system polymerase chain reaction; PCR+SSCP, polymerase chain reaction and single-strand conformation polymorphism.

Table 2

Genotype distribution and risk allele frequency in all studies included

Study (year)Case
Control
HWE test
GGAGAAGGAGAAχ2P-value
Akhmadishina LZ et al3386143606088250.6390.424
Chien-I Chiang CI et al3417910837350253440.0360.850
Volha P et al3514115437151165480.0760.782
Zhi Y et al3612115130148143203.5710.588
Mittal RD et al376710639102109391.1860.276
Gao W et al3885107136177
Wang M et al3911310219105126223.4140.065
Wen H et al264634153138
Mittal RD et al403776277381362.4590.117
Fontana L et al4121255181891.250.264
Covolo L et al429210591120
Arizono K et al431391021014090211.4100.235
Andrew AS et al234124561225335361846.5860.010
Sak SC et al4421824866226259750.0030.953
Huang M et al25266347367329
Figueroa JD et al454344941334334531100.2730.602
Karahalil B et al464938134142171.1810.277
Andrew AS et al4711815533225227864.9350.026
Matullo G et al315453174844821280.2290.632
Wu X et al4826627770267256730.9130.339
Matullo G et al4913613540120145470.0870.768
Broberg K et al50263148062130.0410.840
Kelsey KT et al2413218736228230864.6630.031
Sanyal S et al5112415532113110230.2600.610
Shen M et al289387219298240.1680.682
Matullo G et al52535813121960.1110.739
Stern MC et al2796116218896260.0000.982

Abbreviation: HWE, Hardy-Weinberg equilibrium.

Figure 1

Odds ratios for associations between single nucleotide polymorphism Arg399Gln in XRCC1 and bladder cancer risk.

Notes: (A) A allele vs G allele; (B) AA vs GG; (C) AA + AG vs GG; (D) AA vs AG + GG. Weights are from random effects analysis.

Abbreviations: OR, odds ratio; CI, confidence interval.

Figure 2

Forest plot of XRCC1 Arg399Gln AG genotypes versus the GG genotype.

Note: Weights are from random effects analysis.

Abbreviations: OR, odds ratio; CI, confidence interval.

Sensitivity analysis

The analysis of sensitivity was examined by sequential omission of individual studies. The significance of the pooled ORs in all individual and subgroup analyses was not excessively influenced by omitting any single study.

Heterogeneity and publication bias

Heterogeneity among studies was found in all comparisons of the XRCC1 Arg399Gln polymorphism. Therefore, the random effects model was used for single studies in the subgroup analysis to minimize the impact of bias. Funnel plots demonstrated evidence of obvious asymmetry (Figure 3). Egger’s test displayed strong statistical evidence of publication bias.
Figure 3

Funnel plot of two single nucleotide polymorphisms Arg399Gln in XRCC1 and bladder cancer risk.

Note: Begg’s funnel plot with pseudo 95% confidence limits.

Abbreviations: OR, odds ratio; SE, standard error.

Discussion

Few studies have been conducted to investigate the association between the XRCC1 Arg399Gln polymorphism and bladder cancer risk in recent decades. Compared with those who had the Arg/Arg genotype, a slight decrease was found in risk for individuals who carried the Gln/Gln genotype.27 Subsequently, a case-control investigation was carried out in Northern Italy, and the XRCC1 Arg399Gln polymorphism showed a protective effect on bladder cancer risk among heavy smokers.28 In comparison with Gln allele vs Arg allele, (Gln/Gln + Gln/Arg) vs Arg/Arg, Gln/Gln vs (Gln/Arg + Arg/Arg), Gln/Gln vs Arg/Arg, and Gln/Arg vs Arg/Arg, our meta-analysis based on these 27 studies revealed no correlation between the XRCC1 Arg399Gln polymorphism and bladder cancer risk. As we know, mutations occurring in the nucleotide bases is the most common type of DNA damage, and they exhibit a high frequency (up to several thousand a day). Consequently, once the XRCC1 protein is lost, it may cause increased cell sensitivity to radiation, oxidative stress, and alkylating agents (eg, camptothecin).14 To date, more than 300 single nucleotide changes have been identified in the XRCC1 gene.29 The Arg399Gln mutation leads to conformational changes in the XRCC1 protein that reduces its affinity for the multi-component DNA repair protein complex.29 Presently, relationships between the XRCC1 Arg399Gln polymorphism and cancer development have been observed in several cancers. As previously reported, the alterations of XRCC1 are the most widely accepted suggestion to play a role in the pathogenesis of cancers.30,31 In particular, it has been found that the XRCC1 399Gln/Gln genotype was associated with lung cancer risk, as well as breast cancer risk in African Americans.32 However, no relationship between the XRCC1 Arg399Gln polymorphism and bladder cancer has been found in recent studies. Notably, several limitations of our meta-analysis should be mentioned. Firstly, we strictly compiled data according to the rules of HWE, and ruled out three studies that might have caused the overall effects in our meta-analysis. Secondly, our systematic review was based on unadjusted data. Furthermore, the genotype information stratified for the main confounding variables was not available in the original papers. Taken together, we have shown that there is no association between the XRCC1 Arg-399Gln polymorphism and bladder cancer risk. Additional large-scale studies with adequate methodological quality and controls for possible confounding effects should be conducted.
  51 in total

1.  Constitutional short telomeres are strong genetic susceptibility markers for bladder cancer.

Authors:  Karin Broberg; Jonas Björk; Karin Paulsson; Mattias Höglund; Maria Albin
Journal:  Carcinogenesis       Date:  2005-03-03       Impact factor: 4.944

2.  DNA repair proficiency: potential susceptiblity factor for breast cancer.

Authors:  K J Helzlsouer; E L Harris; R Parshad; H R Perry; F M Price; K K Sanford
Journal:  J Natl Cancer Inst       Date:  1996-06-05       Impact factor: 13.506

3.  Genetic variants of XRCC1, APE1, and ADPRT genes and risk of bladder cancer.

Authors:  Meilin Wang; Chao Qin; Jian Zhu; Lin Yuan; Guangbo Fu; Zhengdong Zhang; Changjun Yin
Journal:  DNA Cell Biol       Date:  2010-06       Impact factor: 3.311

4.  Polymorphisms of DNA repair gene XRCC1 in squamous cell carcinoma of the head and neck.

Authors:  E M Sturgis; E J Castillo; L Li; R Zheng; S A Eicher; G L Clayman; S S Strom; M R Spitz; Q Wei
Journal:  Carcinogenesis       Date:  1999-11       Impact factor: 4.944

Review 5.  Association of genetic polymorphisms in the base excision repair pathway with lung cancer risk: a meta-analysis.

Authors:  Chikako Kiyohara; Koichi Takayama; Yoichi Nakanishi
Journal:  Lung Cancer       Date:  2006-09-18       Impact factor: 5.705

6.  DNA repair gene XRCC1 polymorphisms, smoking, and bladder cancer risk.

Authors:  M C Stern; D M Umbach; C H van Gils; R M Lunn; J A Taylor
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2001-02       Impact factor: 4.254

7.  Complementation of repair gene mutations on the hemizygous chromosome 9 in CHO: a third repair gene on human chromosome 19.

Authors:  L H Thompson; L L Bachinski; R L Stallings; G Dolf; C A Weber; A Westerveld; M J Siciliano
Journal:  Genomics       Date:  1989-11       Impact factor: 5.736

8.  XRCC1 codon 399 mutant allele: a risk factor for recurrence of urothelial bladder carcinoma in patients on BCG immunotherapy.

Authors:  Rama Devi Mittal; Ranjana Singh; Parmeet Kaur Manchanda; Dinesh Ahirwar; Ruchika Gangwar; Pravin Kesarwani; Anil Mandhani
Journal:  Cancer Biol Ther       Date:  2008-05-20       Impact factor: 4.742

Review 9.  Epidemiology of urinary bladder cancer: from tumor development to patient's death.

Authors:  Cristiane Murta-Nascimento; Bernd J Schmitz-Dräger; Maurice P Zeegers; Gunnar Steineck; Manolis Kogevinas; Francisco X Real; Núria Malats
Journal:  World J Urol       Date:  2007-06       Impact factor: 3.661

10.  DNA repair gene XRCC1 polymorphisms and bladder cancer risk.

Authors:  Sei Chung Sak; Jennifer H Barrett; Alan B Paul; D Timothy Bishop; Anne E Kiltie
Journal:  BMC Genet       Date:  2007-04-10       Impact factor: 2.797

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.