| Literature DB >> 26865939 |
Behrooz Mozaffari Namin1, Mohammad Mehdi Soltan Dallal2, Nasser Ebrahimi Daryani3.
Abstract
BACKGROUND: Barrett's oesophagus is a pre-malignant condition at gastroesophageal junction in which normal squamous epithelium is replaced by columnar shape epithelium, which predisposes oesophageal adenocarcinoma. It is known that Barrett's oesophagus evolves as a consequence of chronic gastro-oesophageal reflux disease. Although progression of Barrett's oesophagus to adenocarcinoma is still unclear, increasing incidence of oesophageal cancer and mortality worldwide make its study necessary. Several investigations have been made on the aetiology of oesophageal cancer. Most of them assessed genetical or environmental factors. However, potential role of bacteria in the development of oesophageal adenocarcinoma as a new environmental factor has not been addressed. Previous study on Barrett's disease detected presence of Campylobacter concisus as a new emerging pathogen on Barrett's and oesophageal cancer samples compared with healthy individuals. This indicates that this organism might involve in the progression of Barrett's to oesophageal adenocarcinoma.Entities:
Keywords: Barrett Oesophagus; Campylobacter concisus; Genes; Interleukin-18; Tumour Necrosis Factor-alpha (TNF-α); p53
Year: 2015 PMID: 26865939 PMCID: PMC4744463 DOI: 10.5812/jjm.26393
Source DB: PubMed Journal: Jundishapur J Microbiol ISSN: 2008-3645 Impact factor: 0.747
Quantitative PCR Primer Sequences and Characteristics[a]
| Primer Set | Primer Sequence (5' - 3') | Target Group | Tm, °C | Product Size, bp | Reference |
|---|---|---|---|---|---|
|
|
| 60 | 306 | ( | |
| F | CAGTATCGGCAATTCGCT | ||||
| R | GACAGTATCAAGGATTTACG | ||||
|
| interleukin 18 | 65 | 105 | this study | |
| F | GACGCATGCCCTCAATCC | ||||
| R | CTAGAGCGCAATGGTGCAATC | ||||
|
| tumour necrosis factor-α | 56 | 123 | ( | |
| F | TCTCGAACCCCGAGTGACAA | ||||
| R | TATCTCTCAGCTCCACGCCA | ||||
|
| glyceraldehyde-3-phosphate dehydrogenase | 56 | 183 | ( | |
| F | GGAAGGTGAAGGTCGGAGTC | ||||
| R | TCAGCCTTGACGGTGCCATG | ||||
|
| tumour suppressor gene | 61 | 120 | ( | |
| F | CAGCCAAGTCTGTGACTTGCA | ||||
| R | GTGTGGAATCAACCCACAGCT |
aAbbreviations: Tm, annealing temperature; bp, base pairs.
mRNA-Fold Gene Expression Differences on the Expression of Biomarkers in FLO-1 Cells Co-Cultured With C. concisus[a,b]
| Biomarkers | Time, h | P Value | |||
|---|---|---|---|---|---|
| 1 | 3 | 5 | 7 | ||
|
| < 0.001 | ||||
| T | 677 ± 3 | 417 ± 3.26 | 238 ± 2.2 | 201 ± 2 | |
| C | 198 ± 2 | 166 ± 2.21 | 205 ± 1.2 | 182 ± 1 | |
|
| < 0.05 | ||||
| T | 804 ± 1.5 | 2053 ± 1.39 | 3566 ± 1.82 | 2009 ± 0.95 | |
| C | 2924 ± 1.65 | 2649 ± 2.65 | 2840 ± 1.45 | 2521 ± 1.72 | |
|
| < 0.001 | ||||
| T | 30 ± 3 | 277 ± 2.16 | 433 ± 3.45 | 251 ± 3.23 | |
| C | 53 ±3 | 64 ± 2.45 | 81 ± 3.2 | 65 ± 3.5 | |
aAbbreviations: T, test; C, control.
bAll assays were performed in triplicate. Results are means ± SEM from three independent experiments compared with non-stimulated controls, analysed by two-way ANOVA followed by Bonferroni post-test analysis.
mRNA-Fold Gene Expression Differences on the Expression of Biomarkers in CP-A Cells Co-Cultured With C. concisus[a,b]
| Biomarkers | Time, h | P Value | |||
|---|---|---|---|---|---|
| 1 | 3 | 5 | 7 | ||
|
| < 0.01 | ||||
| T | 20568 ± 3.35 | 1684 ± 3.1 | 952 ± 2.92 | 672 ± 2.68 | |
| C | 2331 ± 2.3 | 2830 ±3.1 | 2241 ± 3 | 2665 ± 3.3 | |
|
| < 0.001 | ||||
| T | 387 ± 1.1 | 401 ± 1.5 | 1395 ± 2.8 | 805 ± 1.95 | |
| C | 1536 ± 1.65 | 1758 ± 1.5 | 1589 ± 1.72 | 1637 ± 1.52 | |
|
| < 0.001 | ||||
| T | 74 ± 1.52 | 27 ± 1 | 51 ± 1.3 | 568 ± 3.23 | |
| C | 3127 ± 2.8 | 3557 ± 3 | 3597 ± 3.2 | 3805 ± 3.5 | |
aAbbreviations: T, test; C, control.
bResults are means ± SEM from three independent experiments compared with non-stimulated controls, analysed by two-way ANOVA followed by Bonferroni post-test analysis.
mRNA-Fold Gene Expression Differences on the Expression of Biomarkers in CP-D Cells Co-Cultured With C. concisus[a,b]
| Biomarkers | Time, h | P Value | |||
|---|---|---|---|---|---|
| 1 | 3 | 5 | 7 | ||
|
| < 0.05 | ||||
| T | 7494 ± 1.2 | 7789 ± 1.62 | 10343 ± 2.32 | 15836 ± 2.68 | |
| C | 15668 ± 5.1 | 14846 ± 4.7 | 13905 ± 6 | 15053 ± 5.3 | |
|
| < 0.001 | ||||
| T | 1196 ± 1.65 | 1335 ± 1.75 | 1208 ± 3.6 | 1285 ± 2.95 | |
| C | 645 ± 1.6 | 651 ± 2 | 726 ± 2.72 | 745 ± 3.52 | |
|
| < 0.001 | ||||
| T | 8.5 ± 1.3 | 5.8 ± 1 | 180 ± 3.3 | 656 ± 4.5 | |
| C | 5847 ± 3 | 7061 ± 3.8 | 7423 ± 5.2 | 6718 ± 4.5 | |
aAbbreviations: T, test; C, control.
bResults are means ± SEM from three independent experiments compared with non-stimulated controls, analysed by two-way ANOVA followed by Bonferroni post-test analysis.
mRNA-Fold Gene Expression Differences on the Expression of Biomarkers in CP-D Cells Co-Cultured With S. salivarius[a,b]
| Biomarkers | Time, h | P Value | |||
|---|---|---|---|---|---|
| 1 | 3 | 5 | 7 | ||
|
| 0.86 | ||||
| T | 3206 ± 1.7 | 3311 ± 1.62 | 2147 ± 1.32 | 2550 ± 1.68 | |
| C | 2898 ± 6.9 | 2837 ± 4.7 | 2822 ± 6 | 2991 ± 5.3 | |
|
| 0.12 | ||||
| T | 4.5 ± 1.45 | 4.75 ± 1.35 | 4.25 ± 1.2 | 4.5 ± 1.29 | |
| C | 7 ± 2 | 7.5 ± 2.2 | 7 ± 1.72 | 7.5 ± 2.52 | |
|
| < 0.001 | ||||
| T | 275 ± 1.45 | 415 ± 1.78 | 490 ± 1.35 | 650 ± 1.45 | |
| C | 4534 ± 2.3 | 5580 ± 2.8 | 6120 ± 2.2 | 4370 ± 2.5 | |
aAbbreviations: T, test; C, control.
bResults are means ± SEM from three independent experiments compared with non-stimulated controls, analysed by two-way ANOVA followed by Bonferroni post-test analysis.