Literature DB >> 26860054

Interactions between wheat Tubby-like and SKP1-like proteins.

Min Jeong Hong1, Dae Yeon Kim, Yong Weon Seo.   

Abstract

Tubby proteins are highly conserved in a wide range of multicellular organisms. The Tubby gene family was first verified in obese mice. In plants, 11 Tubby genes have been identified in Arabidopsis, 14 in rice, and 11 in poplar. However, there is very little information about Tubby-like proteins in wheat. In this study, we identified four Tubby-like protein genes (TaTULP1-TaTULP4) in wheat. A comparison of the gene structure showed a conserved exon number pattern in TaTULPs, although the length of the introns differed. With the exception of TaTULP2, TaTULPs had four exons. To identify the chromosome localization of TaTULPs, BLASTn analyses were performed using the URGI database to predict the chromosomal location of TaTULP genes. TaTULP1, 2, 3 and 4 genes were localized on chromosomes 4, 5, 7 and 2. All TaTULPs harbor a Tubby domain in their C-terminal region and an F-box domain in the N terminus. We investigated protein-protein interactions between the F-box domain of TaTULPs and various wheat SKP1-like proteins (TaSKPs) using the yeast two-hybrid system. TaTULP1, TaTULP3 and TaTULP4 were found to interact with TaSKP1, TaSKP3 and TaSKP6, whereas TaTULP2 showed no interaction with TaSKP proteins. TaTULP proteins tagged with green fluorescent protein were targeted to the Golgi apparatus in plant cells. Our analysis of TaTULPs will aid in understanding the functions of TaTULPs in plants.

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Year:  2016        PMID: 26860054     DOI: 10.1266/ggs.14-00084

Source DB:  PubMed          Journal:  Genes Genet Syst        ISSN: 1341-7568            Impact factor:   1.517


  6 in total

Review 1.  Tubby-like proteins (TLPs) transcription factor in different regulatory mechanism in plants: a review.

Authors:  Nasreen Bano; Shahre Aalam; Sumit Kumar Bag
Journal:  Plant Mol Biol       Date:  2022-10-18       Impact factor: 4.335

2.  Comprehensive Profiling of Tubby-Like Proteins in Soybean and Roles of the GmTLP8 Gene in Abiotic Stress Responses.

Authors:  Hong-Ru Xu; Ying Liu; Tai-Fei Yu; Ze-Hao Hou; Jia-Cheng Zheng; Jun Chen; Yong-Bin Zhou; Ming Chen; Jin-Dong Fu; You-Zhi Ma; Wen-Liang Wei; Zhao-Shi Xu
Journal:  Front Plant Sci       Date:  2022-04-25       Impact factor: 5.753

3.  Putative candidate genes responsible for leaf rolling in rye (Secale cereale L.).

Authors:  Beata Myśków; Magdalena Góralska; Natalia Lenarczyk; Ilona Czyczyło-Mysza; Stefan Stojałowski
Journal:  BMC Genet       Date:  2018-08-09       Impact factor: 2.797

4.  Decrypting tubby-like protein gene family of multiple functions in starch root crop cassava.

Authors:  Ming-You Dong; Xian-Wei Fan; Xiang-Yu Pang; You-Zhi Li
Journal:  AoB Plants       Date:  2019-11-25       Impact factor: 3.276

5.  Genome-Wide Identification, Characterization, and Expression Analysis of Tubby-like Protein (TLP) Gene Family Members in Woodland Strawberry (Fragaria vesca).

Authors:  Shuangtao Li; Guixia Wang; Linlin Chang; Rui Sun; Ruishuang Wu; Chuanfei Zhong; Yongshun Gao; Hongli Zhang; Lingzhi Wei; Yongqing Wei; Yuntao Zhang; Jing Dong; Jian Sun
Journal:  Int J Mol Sci       Date:  2022-10-08       Impact factor: 6.208

6.  A tubby-like protein CsTLP8 acts in the ABA signaling pathway and negatively regulates osmotic stresses tolerance during seed germination.

Authors:  Shuangtao Li; Zhirong Wang; Fei Wang; Hongmei Lv; Meng Cao; Na Zhang; Fengju Li; Hao Wang; Xingsheng Li; Xiaowei Yuan; Bing Zhao; Yang-Dong Guo
Journal:  BMC Plant Biol       Date:  2021-07-17       Impact factor: 4.215

  6 in total

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