Literature DB >> 26856689

Conformational transformation of ascidiacyclamide analogues induced by incorporating enantiomers of phenylalanine, 1-naphthylalanine or 2-naphthylalanine.

Akiko Asano1, Katsuhiko Minoura1, Takeshi Yamada1, Mitsunobu Doi1.   

Abstract

We designed five ascidiacyclamide analogues [cyclo(-Xxx(1) -oxazoline(2) -d-Val(3) -thiazole(4) -l-Ile(5) -oxazoline(6) -d-Val(7) -thiazole(8) -)] incorporating l-1-naphthylalanine (l-1Nal), l-2-naphthylalanine (l-2Nal), d-phenylalanine (d-Phe), d-1-naphthylalanine (d-1Nal) or d-2-naphthylalanine (d-2Nal) into the Xxx(1) position of the peptide. The conformations of these analogues were then examined using (1) H NMR, CD spectroscopy, and X-ray diffraction. These analyses suggested that d-enantiomer-incorporated ASCs [(d-Phe), (d-1Nal), and (d-2Nal)ASC] transformed from the folded to the open structure in solution more easily than l-enantiomer-incorporated ASCs [(l-Phe), (l-1Nal), and (l-2Nal)ASC]. Structural comparison of the two analogues containing isomeric naphthyl groups showed that the 1-naphthyl isomer induced a more stable open structure than the 2-naphthyl isomer. In particular, [d-1Nal]ASC showed the most significant transformation from the folded to the open structure in solution, and exhibited the strongest cytotoxicity toward HL-60 cells.
Copyright © 2016 European Peptide Society and John Wiley & Sons, Ltd.

Entities:  

Keywords:  1H NMR; CD spectrum; ROESY; ascidiacyclamide; crystal structure; cytotoxicity; enantiomer; naphthylalanine; phenylalanine; ring-current effect; structural isomer

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Year:  2016        PMID: 26856689     DOI: 10.1002/psc.2853

Source DB:  PubMed          Journal:  J Pept Sci        ISSN: 1075-2617            Impact factor:   1.905


  2 in total

1.  Enantioselective extraction of unprotected amino acids coupled with racemization.

Authors:  Haofei Huang; Yingji Jin; Mukesh E Shirbhate; Dayoung Kang; Misun Choi; Qian Chen; Youngmee Kim; Sung-Jin Kim; Il-Suk Byun; Ming Wang; Jean Bouffard; Seong Kyu Kim; Kwan Mook Kim
Journal:  Nat Commun       Date:  2021-01-05       Impact factor: 14.919

2.  NMR-based quantitative studies of the conformational equilibrium between their square and folded forms of ascidiacyclamide and its analogues.

Authors:  Akiko Asano; Katsuhiko Minoura; Yuki Kojima; Taishi Yoshii; Ryoya Ito; Takeshi Yamada; Takuma Kato; Mitsunobu Doi
Journal:  RSC Adv       Date:  2020-09-09       Impact factor: 4.036

  2 in total

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