Literature DB >> 26851388

Draft genome sequence of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB strain BBA69670.

Daniel Wibberg1, Louise Andersson2, Oliver Rupp3, Alexander Goesmann3, Alfred Pühler1, Mark Varrelmann4, Christina Dixelius5, Andreas Schlüter6.   

Abstract

Rhizoctonia solani is a widespread plant pathogenic fungus featuring a broad host range including several economically important crops. Accordingly, genome analyses of R. solani isolates are important to uncover their pathogenic potential. Draft genome sequences for four R. solani isolates representing three of the 14 R. solani anastomosis groups (AGs) are available. Here, we present the first draft genome sequence for an R. solani AG2-2IIIB isolate that is pathogenic on sugar beet. The fungal genome was assembled in 2065 scaffolds consisting of 5826 contigs amounting to a size of about 52 Mb which is larger than any other R. solani isolate known today. Genes potentially encoding cellulolytic, lignolytic and pectinolytic enzymes were identified.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  AUGUSTUS; Plant pathogenic fungus; Rhizoctonia solani AG2-2IIIB; Ultrafast sequencing

Mesh:

Year:  2016        PMID: 26851388     DOI: 10.1016/j.jbiotec.2016.02.001

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  7 in total

1.  A LysM effector protein from the basidiomycete Rhizoctonia solani contributes to virulence through suppression of chitin-triggered immunity.

Authors:  Fredrik Dölfors; Louise Holmquist; Christina Dixelius; Georgios Tzelepis
Journal:  Mol Genet Genomics       Date:  2019-05-10       Impact factor: 3.291

2.  Rhizoctonia solani Infection Assay of Young Sugar Beet and Arabidopsis plantlets.

Authors:  Fredrik Dölfors; Louise Holmquist; Georgios Tzelepis; Christina Dixelius
Journal:  Bio Protoc       Date:  2022-01-20

3.  Identification and expression analysis of pathogenicity-related genes of Rhizoctonia solani anastomosis groups infecting rice.

Authors:  S T Prashantha; B M Bashyal; S Gopala Krishnan; Himanshu Dubey; Amolkumar U Solanke; G Prakash; Rashmi Aggarwal
Journal:  3 Biotech       Date:  2021-08-02       Impact factor: 2.893

4.  Biosynthetic Potential of the Endophytic Fungus Helotiales sp. BL73 Revealed via Compound Identification and Genome Mining.

Authors:  Martina Oberhofer; Fabian Malfent; Martin Zehl; Ernst Urban; Judith Wackerlig; Gottfried Reznicek; Gabriel A Vignolle; Christian Rückert; Tobias Busche; Daniel Wibberg; Sergey B Zotchev
Journal:  Appl Environ Microbiol       Date:  2022-02-02       Impact factor: 5.005

5.  Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes.

Authors:  Daniel Wibberg; Louise Andersson; Georgios Tzelepis; Oliver Rupp; Jochen Blom; Lukas Jelonek; Alfred Pühler; Johan Fogelqvist; Mark Varrelmann; Andreas Schlüter; Christina Dixelius
Journal:  BMC Genomics       Date:  2016-03-17       Impact factor: 3.969

6.  Pangenome Analysis of the Soilborne Fungal Phytopathogen Rhizoctonia solani and Development of a Comprehensive Web Resource: RsolaniDB.

Authors:  Abhinav Kaushik; Daniel P Roberts; Abhinay Ramaprasad; Sara Mfarrej; Mridul Nair; Dilip K Lakshman; Arnab Pain
Journal:  Front Microbiol       Date:  2022-03-25       Impact factor: 5.640

7.  Transcriptome analysis reveals the host selection fitness mechanisms of the Rhizoctonia solani AG1IA pathogen.

Authors:  Yuan Xia; Binghong Fei; Jiayu He; Menglin Zhou; Danhua Zhang; Linxiu Pan; Shuangcheng Li; Yueyang Liang; Lingxia Wang; Jianqing Zhu; Ping Li; Aiping Zheng
Journal:  Sci Rep       Date:  2017-08-31       Impact factor: 4.379

  7 in total

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