Literature DB >> 26851387

Complete genome sequence of Streptomyces reticuli, an efficient degrader of crystalline cellulose.

Daniel Wibberg1, Arwa Al-Dilaimi1, Tobias Busche1, Ina Wedderhoff2, Hildgund Schrempf2, Jörn Kalinowski3, Darío Ortiz de Orué Lucana4.   

Abstract

We report the complete, GC-rich genome sequence of the melanin producer Streptomyces reticuli Tü 45 (S. reticuli) that targets and degrades highly crystalline cellulose by the concerted action of a range of biochemically characterized proteins. It consists of a linear 8.3 Mb chromosome, a linear 0.8 Mb megaplasmid, a linear 94 kb plasmid and a circular 76 kb plasmid. Noteworthy, the megaplasmid is the second largest known Streptomyces plasmid. Preliminary analysis reveals, among others, 43 predicted gene clusters for the synthesis of secondary metabolites and 456 predicted genes for binding and degradation of cellulose, other polysaccharides and carbohydrate-containing compounds.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cellulases; Polysaccharide-binding proteins; Secondary metabolites; Streptomycetes

Mesh:

Substances:

Year:  2016        PMID: 26851387     DOI: 10.1016/j.jbiotec.2016.02.002

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  5 in total

Review 1.  System-level understanding of gene expression and regulation for engineering secondary metabolite production in Streptomyces.

Authors:  Yongjae Lee; Namil Lee; Soonkyu Hwang; Kangsan Kim; Woori Kim; Jihun Kim; Suhyung Cho; Bernhard O Palsson; Byung-Kwan Cho
Journal:  J Ind Microbiol Biotechnol       Date:  2020-08-10       Impact factor: 3.346

Review 2.  Recent advances in understanding Streptomyces.

Authors:  Keith F Chater
Journal:  F1000Res       Date:  2016-11-30

3.  The Hybrid Strategy of Thermoactinospora rubra YIM 77501T for Utilizing Cellulose as a Carbon Source at Different Temperatures.

Authors:  Yi-Rui Yin; Zhao-Hui Meng; Qing-Wen Hu; Zhao Jiang; Wen-Dong Xian; Lin-Hua Li; Wei Hu; Feng Zhang; En-Min Zhou; Xiao-Yang Zhi; Wen-Jun Li
Journal:  Front Microbiol       Date:  2017-05-29       Impact factor: 5.640

4.  Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil.

Authors:  Ricardo Rodrigues de Melo; Gabriela Felix Persinoti; Douglas Antonio Alvaredo Paixão; Fábio Márcio Squina; Roberto Ruller; Helia Harumi Sato
Journal:  Braz J Microbiol       Date:  2017-02-10       Impact factor: 2.476

5.  Complete Genome Sequence of Lignin-Degrading Streptomyces sp. Strain S6, Isolated from an Oil Palm Plantation in Malaysia.

Authors:  Nurtasbiyah Yusof; Analhuda Abdullah Tahir; Fatimah Azizah Riyadi; Nurul Syazwani Ahmad Sabri; Fazrena Nadia Md Akhir; Nor'azizi Othman; Kah Lock Chin; Kuang Yu Tseng; Siang Tean Chin; Zuriati Zakaria; Cheng Yu Lai; Hirofumi Hara
Journal:  Microbiol Resour Announc       Date:  2020-01-30
  5 in total

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