Literature DB >> 2684986

The calcium-binding site in the galactose chemoreceptor protein. Crystallographic and metal-binding studies.

M N Vyas1, B L Jacobson, F A Quiocho.   

Abstract

We have determined the relative affinities in solution for various metals which bind to the lone calcium-binding site of the D-galactose-binding protein which resembles the EF-hand loop. In order of affinity the metals are: Ca2+ approximately Tb3+ approximately Pb2+ greater than Cd2+ greater than Sr2+ greater than Mg2+ much greater than Ba2+. The binding affinity for calcium (Kd = 2 microM) and the slow off-rate determined for terbium (1 x 10(-3) s-1) and that the metal-binding site is unperturbed by sugar binding argue for a structural role. Furthermore, we have crystallographically refined the structure of the binding protein with the calcium substituted by cadmium, compared it with the calcium-bound structure, and found them to be identical. The results of these structural and solution studies support the hypothesis that for a given metal-binding loop, cation hydration energy, size, and charge are major factors contributing to binding affinity.

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Year:  1989        PMID: 2684986

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  13 in total

1.  Crystal stuctures of MglB-2 (TP0684), a topologically variant d-glucose-binding protein from Treponema pallidum, reveal a ligand-induced conformational change.

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Journal:  Protein Sci       Date:  2018-02-01       Impact factor: 6.725

2.  Rapid fold and structure determination of the archaeal translation elongation factor 1beta from Methanobacterium thermoautotrophicum.

Authors:  G Kozlov; I Ekiel; N Beglova; A Yee; A Dharamsi; A Engel; N Siddiqui; A Nong; K Gehring
Journal:  J Biomol NMR       Date:  2000-07       Impact factor: 2.835

3.  Adaptation Independent Modulation of Auditory Hair Cell Mechanotransduction Channel Open Probability Implicates a Role for the Lipid Bilayer.

Authors:  Anthony W Peng; Radhakrishnan Gnanasambandam; Frederick Sachs; Anthony J Ricci
Journal:  J Neurosci       Date:  2016-03-09       Impact factor: 6.167

4.  Calcium(II) site specificity: effect of size and charge on metal ion binding to an EF-hand-like site.

Authors:  E E Snyder; B W Buoscio; J J Falke
Journal:  Biochemistry       Date:  1990-04-24       Impact factor: 3.162

5.  Integration of Diverse Research Methods to Analyze and Engineer Ca-Binding Proteins: From Prediction to Production.

Authors:  Michael Kirberger; Xue Wang; Kun Zhao; Shen Tang; Guantao Chen; Jenny J Yang
Journal:  Curr Bioinform       Date:  2010-03-01       Impact factor: 3.543

6.  Kinetic control of Ca(II) signaling: tuning the ion dissociation rates of EF-hand Ca(II) binding sites.

Authors:  M Renner; M A Danielson; J J Falke
Journal:  Proc Natl Acad Sci U S A       Date:  1993-07-15       Impact factor: 11.205

7.  Statistical analysis of structural characteristics of protein Ca2+-binding sites.

Authors:  Michael Kirberger; Xue Wang; Hai Deng; Wei Yang; Guantao Chen; Jenny J Yang
Journal:  J Biol Inorg Chem       Date:  2008-07-02       Impact factor: 3.358

8.  19F NMR studies of the D-galactose chemosensory receptor. 2. Ca(II) binding yields a local structural change.

Authors:  L A Luck; J J Falke
Journal:  Biochemistry       Date:  1991-04-30       Impact factor: 3.162

9.  Thermal motions of surface alpha-helices in the D-galactose chemosensory receptor. Detection by disulfide trapping.

Authors:  C L Careaga; J J Falke
Journal:  J Mol Biol       Date:  1992-08-20       Impact factor: 5.469

10.  Flexibility of EF-hand motifs: structural and thermodynamic studies of Calcium Binding Protein-1 from Entamoeba histolytica with Pb2+, Ba2+, and Sr2+.

Authors:  Shivesh Kumar; Ejaz Ahmad; Sanjeev Kumar; Rizwan Hasan Khan; Samudrala Gourinath
Journal:  BMC Biophys       Date:  2012-08-20       Impact factor: 4.778

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