| Literature DB >> 26849056 |
Jing Li1,2, Xin Ge1, Xiaona Wang1,2, Xiao Liu1, Jianmin Ma1.
Abstract
OBJECTIVE: We aimed to examine the potential involvement of local complement system gene expression in the pathogenesis of benign lymphoepithelial lesions (BLEL) of the lacrimal gland.Entities:
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Year: 2016 PMID: 26849056 PMCID: PMC4743846 DOI: 10.1371/journal.pone.0148290
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Differentially expressed genes of the complement System in BLEL.
| Gene Symbol | Description | Changes | P Value |
|---|---|---|---|
| complement component 3 | up | 2.18E-21 | |
| complement component 2 | up | 9.40E-13 | |
| integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) | up | 5.21E-11 | |
| complement component (3d/Epstein Barr virus) receptor 2 | up | 1.76E-06 | |
| complement component 1, q subcomponent, B chain | up | 1.18E-10 | |
| complement component (3b/4b) receptor 1 (Knops blood group) | up | 1.69E-10 | |
| integrin, alpha X (complement component 3 receptor 4 subunit) | up | 4.38E-09 | |
| complement factor properdin | up | 5.83E-06 | |
| complement component 1, q subcomponent, A chain | up | 8.90E-06 | |
| complement component 4B (Chido blood group)|complement component 4A (Rodgers blood group)|complement C4-B-like | up | 1.20E-05 | |
| Fanconi anemia, complementation group A | up | 6.45E-04 | |
| complement component 1, q subcomponent, C chain | up | 0.0015 | |
| complement component 3a receptor 1 | up | 0.0085 | |
| complement factor H-related 4 | up | 9.40E-13 | |
| complement component 5 | down | 3.82E-09 | |
| complement factor I | down | 2.03E-12 | |
| complement factor H-related 1|complement factor H | down | 3.61E-13 | |
| complement factor H | down | 1.61E-13 | |
| CD55 molecule, decay accelerating factor for complement (Cromer blood group) | down | 8.46E-08 | |
| complement component (3b/4b) receptor 1-like | down | 1.95E-07 | |
| complement factor D (adipsin) | down | 0.0059 |
Sequences of real-time PCR primers.
| Gene | Genebank accession | Primer Sequence 5’→3' | Amplicon (bp) |
|---|---|---|---|
| NM_002046.4 | F: TGTTGCCATCAATGACCCCTT | 202 | |
| R: CTCCACGACGTACTCAGCG | |||
| NM_000064.2 | F: CCTGGACAAGGTCTCACACTC | 136 | |
| R: GAACCGGGTACAGCTTTCCT | |||
| NM_001127491.1 | F: ACCCCAAGTTTGCTGAGAGT | 111 | |
| R: ATCCTCAAGAGCTGTGGCAA | |||
| NM_000491.3 | F: ATGCCTACAACACCTTCCAGG | 150 | |
| R: CTGGAAAGAGCAGGAACCCG |
Fig 13 genes that were upregulated as identified by microarray data, were subjected to RT-PCR analysis for confirmation purposes.
The results of differences in gene expression from microarray and RT-PCR were found to be consistent.
Fig 2Both C3c (A) and C1q (C) expressions were positive in the BLEL samples (black arrows), while negative in the control group (B and D).
Fig 3GO analysis showed that the most enriched and activated functional gene group in the differential genes of BLEL includes genes related to signaling pathways mediated by the complement system.