Literature DB >> 26843833

A new species of Docosia Winnertz from Central Europe, with DNA barcoding based on four gene markers (Diptera, Mycetophilidae).

Jan Ševčík1, David Kaspřák2, Björn Rulik3.   

Abstract

A new species of Docosia Winnertz, Docosia dentata sp. n., is described and illustrated, based on a single male specimen collected in Muránska planina National Park in Central Slovakia. DNA sequences (COI, COII, CytB, and ITS2) are included and compared for 13 species of Docosia. There was found only little congruence between the molecular results and previous scarce data about interspecific relationships based on morphology. The COI and CytB gene markers showed the highest interspecific gene distances while ITS2 showed the lowest ones. An updated key to the 23 Central European species of Docosia is also presented.

Entities:  

Keywords:  Bibionomorpha; DNA sequences; Palaearctic Region; Sciaroidea; fungus gnats; identification key; taxonomy

Year:  2016        PMID: 26843833      PMCID: PMC4727484          DOI: 10.3897/zookeys.549.6925

Source DB:  PubMed          Journal:  Zookeys        ISSN: 1313-2970            Impact factor:   1.546


Introduction

The species in the genus Winnertz, 1863 are rather uniform, medium sized fungus gnats (: ) with dark body and unmarked hyaline wings. Their identification is mainly based on the characters on the male and female terminalia PageBreak(cf. Laštovka and Ševčík 2006). The genus was traditionally placed in the subfamily (e.g. Søli 1997), though recent molecular studies challenge this and place among the genera (Rindal et al. 2009, Ševčík et al. 2013). Data on the biology of are scarce, with the exception of the common mycophagous species (Walker, 1856), see the recent reviews by Chandler (2010), Jakovlev (2012) and Ševčík (2010a). One species ( Edwards, 1925) has repeatedly been reared from bird’s nests (cf. Rulik and Kallweit 2006). Although is a principally Holarctic genus, several species have also been reported from the Neotropical, Afrotropical and Oriental regions (Bechev 2000, Ševčík 2010b, Oliveira and Amorim 2011, Kurina and Ševčík 2012). A total of 32 described species are currently known from Europe (Kurina and Ševčík 2011). Central European species may be identified according to the key and illustrations of the male and female terminalia provided by Laštovka and Ševčík (2006). Their key includes 16 species from the Czech and Slovak Republics. Additional species were described and figured by Ševčík (2006) from Slovakia, by Ševčík and Laštovka (2008) and Kurina (2008) from the Alps, and by Kurina and Ševčík (2011) from Slovakia and Greece. A further new species of from Slovakia, tentatively announced by Ševčík (2012), is described in this contribution, together with DNA sequence data provided for this and related species, and the opportunity is taken to update the key to the 23 Central European species of the genus. Morphological terminology follows that of Søli (1997).

Material and methods

Material from the Czech and Slovak Republics

The holotype of the new species was collected by the senior author by sweeping in Muránska planina National Park in central Slovakia. This national park belongs to the most valuable protected areas in Slovakia with regard to biodiversity, with many rare and thermophilous species, often reaching there the northernmost limit of their distribution (cf. Ševčík and Kurina 2011a, b). The habitats include mainly karst valleys and limestone rocky slopes, covered mostly by beech and spruce forests. The material used for DNA extraction was collected with Malaise traps or sweep net at different localities of the Czech and Slovak Republics in the years 2012–2015. The voucher specimens are deposited in the or in the . collection of Jan Ševčík Silesian Museum, Opava, Czech Republic All the specimens were collected in 70% ethanol. The holotype is stored in the glycerine medium in a plastic pinned microvial. Before placing in glycerol the specimen was incubated in proteinase K to extract DNA. Genomic DNA was extracted using NucleoSpin Tissue Kit (Macherey-Nagel, Düren, Germany) following the included protocol. The specimens were cleaned with PBS and left in lysis buffer with proteinase K overnight at 56 °C. The primers used for the PCR amplifications were as folPageBreaklows: LCO1490 (5′-GGTCAACAAATCATAAAGATATTGG-3′) and HCO2198 (5′-TAAACTTCAGGGTGACCAAAAAATCA-3′) (Folmer et al. 1994) for COI; CYTB-F (5’-TATGTTTTATGAGGACAAATATC-3’) and CYTB-R (5’-AAATTCTATCTTATGTTTCAAAAC-3’) (Su et al. 2008) or mCYTB-R (5’-ATTACTCCCCCTAATTTATTAGGAAT-3’) (Ševčík lab) for cytochrome B; ITS2a (5’-TGTGAACTGCAGGACACAT-3’) and ITS2b (5’-TATGCTTAAATTCAGGGGGT-3’) (Beebe & Saul, 1995) for ITS2; and mCOII-F (5’-CAAGATAGAGCTTCTCCTCTTATAG-3’) and mCOII-R (5’-GGCATAAATCTATGATTAGCCCCAC-3’) (Ševčík lab) for COII. The amplification programme for the gene fragments was 94 °C for 3 min, followed by 35 cycles of 94 °C for 1 min, 49–50 °C for 1 min and 72 °C for 1:30 min and a final extension step at 72 °C for 7 min. The obtained PCR products were purified using Gel/PCR DNA Fragments Extraction Kit (Geneaid, New Taipei City, Taiwan) following manufacturer’s protocol and sequenced by Macrogen Europe (Netherlands). (Phosphate Buffered Saline)

Material from Germany

German material discussed here was obtained within the . Specimens used for DNA extraction were collected with Malaise traps at two different localities in Germany in the years 2013 and 2015. All the specimens were collected in pure 96% ethanol. German Barcode of Life Project Genomic DNA was extracted from legs of the specimens using the BioSprint96 magnetic bead extractor by Qiagen (Hilden, Germany). was carried out in total reaction mixes of 20 μl, including 2 μl of undiluted DNA template, 0,8 μl of each primer (10 pmol/μl), 2 μl of ‘Q-Solution’ and 10 μl of ‘Multiplex PCR Master Mix’, containing hot start Taq DNA polymerase and buffers. The latter components are available in the Multiplex PCR kit from Qiagen (Hilden, Germany). PCR reactions were run individually and not multiplexed. Polymerase chain reaction Thermal cycling was performed on GeneAmp PCR System 2700 (Applied Biosystems, Foster City, CA, USA) as follows: hot start Taq activation: 15 min at 95 °C; first cycle set (15 repeats): 35-s denaturation at 94 °C, 90-s annealing at 55 °C (−1 °C/cycle) and 90-s extension at 72 °C. Second cycle set (25 repeats): 35-s denaturation at 94 °C, 90-s annealing at 40 °C and 90-s extension at 72 °C; final elongation 10 min at 72 °C using the primers LCO1490-JJ: 5´-CHACWAAYCATAAAGATATYGG- 3´ with HCO2198-JJ: 5´-AWACTTCVGGRTGVCCAAARAATCA- 3´ respectively (Astrin and Stüben 2008). Sequencing of the unpurified PCR products in both directions was conducted at Beijing Genomics Institute (Hongkong, CN) by using the amplification primers. Barcode sequence analysis was done using the Geneious® software version 7.1.7 (http://www.geneious.com). Vouchers were deposited in the collection of the Zoologisches Forschungsmuseum Alexander Koenig, Bonn, Germany.

Sequence alignment and analyses

The sequences were aligned using MAFFT version 7 (Katoh and Standley 2013) on the MAFFT server (http://mafft.cbrc.jp/alignment/server/) with default settings and then manually edited. The protein-coding gene COI, COII and CytB sequences were checked based on amino-acid translations and yielded indel-free nucleotide alignments. All unreliably aligned regions of ITS2 fragment were removed in GBLOCKS 0.91b program (Castresana 2000) on the Gblocks server (http://molevol.cmima.csic.es/castresana/Gblocks_server.html). We created four alignments, one for each gene, and one concatenated alignment for all gene fragments with 15 taxa, including additional sequences from GenBank (KT316839, KC435639, KC435683 and KC435708). The final molecular dataset consists of 2039 characters: COI–658, COII–546, CytB–433, ITS2–402 bp. The datasets were analysed using maximum likelihood analyses conducted on the CIPRES computer cluster using RAxML-HPC BlackBox 7.6.3 (Stamatakis 2006) employing automatic bootstrapping on the partitioned dataset. All the sequences were deposited into GenBank and BOLD (http://dx.doi.org/10.5883/DS-DOCODENT), where detailed metadata is available (see Table 1). As outgroup taxa we selected two representatives of the subfamily , in concordance with previous molecular studies (Rindal et al. 2009, Ševčík et al. 2013).
Table 1.

List of species, sampling locality and year, and accession numbers.

SpeciesVoucher codeSampling locality and yearGenBank accession numbersBOLD Process ID
COI COIICYTBITS2
Boletina nasuta (Haliday, 1839)JSGS18Slovakia, 2013 KT923571 KT923585 KT923598 KT923614 JSDO011-15
Gnoriste bilineata Zetterstedt, 1852JSGS4Czech Republic, 2009 KT316839 KT923584 KT923597 KT923613 JSDO014-15
Docosia dentata sp. n.JSDO1Slovakia, 2012 KT923562 KT923575 KT923600 KT923604 JSDO001-15
Docosia diutina Plassmann, 1996 ZFMK-TIS-2516913Germany, 2013 KU146854 KU146860 KU146858 KU146856 SRDOC001-15
Docosia flavicoxa Strobl, 1900JSDO9aSlovakia, 2012 KT923570 KT923583 KT923596 KT923612 JSDO009-15
Docosia fumosa Edwards, 1925 ZFMK-TIS-2556735Germany, 2015 KU146855 KU146861 KU146859 KU146857 SRDOC002-15
Docosia fuscipes (Roser, 1840)JSDO2Slovakia, 2015 KT923563 KT923576 KT923590 KT923605 JSDO002-15
Docosia gilvipes (Walker, 1856)JSGS29Slovakia, 2013 KT923572 KT923586 KT923599 KT923615 JSDO012-15
Docosia landrocki Laštovka & Ševčík, 2006JSDO7Slovakia, 2014 KT923568 KT923581 KT923594 KT923610 JSDO007-15
Docosia lastovkai Chandler, 1994JSDO4Slovakia, 2013 KT923565 KT923578 KT923591 KT923607 JSDO004-15
Docosia montana Laštovka & Ševčík, 2006JSDO5Slovakia, 2013 KT923566 KT923579 KT923592 KT923608 JSDO005-15
Docosia moravica Landrock, 1916JSDO6Slovakia, 2013 KT923567 KT923580 KT923593 KT923609 JSDO006-15
Docosia muranica Kurina & Ševčík, 2011JSM10Slovakia, 2013 KC435639 KT923587 KC435683 KC435708 JSDO013-15
Docosia sciarina (Meigen, 1830)JSDO8Czech Republic, 2014 KT923569 KT923582 KT923595 KT923611 JSDO008-15
Docosia setosa Landrock, 1916JSDO3Slovakia, 2015 KT923564 KT923577 KT923601 KT923606 JSDO003-15
Genetic distances were calculated in MEGA6 (Tamura et al. 2013) using with pairwise deletion for the treatment and they are demonstrated in Table 2 and Fig. 5.
Table 2.

Kimura 2-parametr genetic distances for COI, COII, CytB and ITS2. The lowest and highest values among species are highlighted in bold.

COI 1234567891011121314
1 Docosia dentata sp. n.
2 Docosia diutina 8,6%
3 Docosia flavicoxa 9,8%12,4%
4 Docosia fumosa 13,3%13,1%13,5%
5 Docosia fuscipes 8,2%9,4%11,1%12,8%
6 Docosia gilvipes 13,9%14,6%14,1%12,8%13,5%
7 Docosia landrocki 9,3%9,9%12,3%13,3%10,6%15,9%
8 Docosia lastovkai 12,6%13,5%15,2%13,9%11,9%14,8%14,0%
9 Docosia montana 7,5%10,6%11,4%15,3%10,4%14,8%11,7%14,4%
10 Docosia moravica 13,2%15,1%15,4%19,1%14,7% 19,6%15,1%17,0%16,4%
11 Docosia muranica 10,2%13,0%14,6%16,6%11,3%16,2%13,3%15,5%12,0%17,8%
12 Docosia sciarina 9,4%11,5%11,8%14,6%11,2%14,3%12,0%13,1%9,0%15,7%14,4%
13 Docosia setosa 6,0%10,0%10,3%14,1%10,3%14,7%10,6%13,9%7,1%14,7%12,3%9,0%
14 Boletina nasuta 15,9%17,8%16,2%18,6%16,3%16,1%17,4%16,4%18,0%20,1%16,2%15,7%16,1%
15 Gnoriste bilineata 16,1%17,9%18,4%15,4%17,0%15,6%18,2%17,5%18,6%19,8%20,3%17,5%17,2%14,9%
COII 1234567891011121314
1 Docosia dentata sp. n.
2 Docosia diutina 6,6%
3 Docosia flavicoxa 7,5%8,2%
4 Docosia fumosa 14,4%17,2%14,9%
5 Docosia fuscipes 7,5%8,9%11,0%17,4%
6 Docosia gilvipes 7,2%10,2%11,9%16,8%8,6%
7 Docosia landrocki 6,8%5,6%7,8%15,2%8,4%10,7%
8 Docosia lastovkai 11,7%12,9%14,2% 19,3%11,7%9,7%14,8%
9 Docosia montana 6,2%7,3%9,4%15,8%9,3%10,3%8,4%13,5%
10 Docosia moravica 6,2%8,8%7,3%16,6%9,1%9,3%9,1%12,2%7,3%
11 Docosia muranica 8,6%11,0%12,9%16,0%9,1% 4,3%11,5%12,2%11,1%11,0%
12 Docosia sciarina 6,7%8,7%8,4%17,4%10,1%8,9%8,9%13,0%6,9%7,3%11,6%
13 Docosia setosa 5,1%6,4%7,7%15,2%8,2%10,0%6,4%13,5%5,6%6,6%11,0%7,4%
14 Boletina nasuta 23,1%22,8%20,9%21,9%21,2%22,4%22,4%23,1%21,2%22,2%20,0%22,6%21,0%
15 Gnoriste bilineata 17,7%18,5%18,2%18,2%17,7%19,7%18,8%25,4%18,8%18,0%17,4%18,6%17,9%19,1%
cytB 1234567891011121314
1 Docosia dentata sp. n.
2 Docosia diutina 8,3%
3 Docosia flavicoxa 11,0%14,5%
4 Docosia fumosa 19,3%22,0%21,0%
5 Docosia fuscipes 10,9%12,5%14,9%24,1%
6 Docosia gilvipes 19,6%20,6%19,9%19,7%21,9%
7 Docosia landrocki 10,1%9,7%14,3%23,6%12,2%19,9%
8 Docosia lastovkai 15,5%16,4%15,8% 26,0%18,7%21,0%15,4%
9 Docosia montana 9,4%12,8%17,1%22,9%13,1%22,3%13,5%21,9%
10 Docosia moravica 10,0%11,6%12,0%17,8%14,0%19,5%12,0%16,1%14,5%
11 Docosia muranica 7,8%12,6%13,6%21,6%10,4%19,4%12,9%16,2%13,1%13,9%
12 Docosia sciarina 7,8%11,0%10,8%21,7%11,4%19,9%10,1%16,1%11,6%10,5%10,7%
13 Docosia setosa 6,6%10,3%10,0%21,5%11,0%16,7%9,4%15,7%10,8%10,3%10,2%7,4%
14 Boletina nasuta 17,4%18,8%19,0%21,9%22,2%18,9%22,3%20,8%25,0%17,9%23,9%18,5%19,9%
15 Gnoriste bilineata 16,0%18,8%19,0%18,9%20,6%20,4%20,3%21,1%21,2%16,0%20,2%18,9%18,4%17,1%
ITS2 1234567891011121314
1 Docosia dentata sp. n.
2 Docosia diutina 1,8%
3 Docosia flavicoxa 2,6%3,4%
4 Docosia fumosa 9,6%9,2%10,4%
5 Docosia fuscipes 0,8%2,3%3,5%8,7%
6 Docosia gilvipes 7,2%6,9%9,1%11,3%7,2%
7 Docosia landrocki 2,0%1,3%3,7%9,2%2,9%6,0%
8 Docosia lastovkai 4,3%5,2%5,8% 12,7%4,7%7,9%5,2%
9 Docosia montana 2,0%3,4%3,2%9,6%2,1%8,7%3,7%6,4%
10 Docosia moravica 1,3%3,2%1,8%9,2%1,9%8,3%3,5%4,4%2,6%
11 Docosia muranica 0,3%2,1%2,9%9,6%0,5%6,9%2,3%4,1%2,3%1,3%
12 Docosia sciarina 1,3%2,1%3,4%9,4%2,1%7,9%2,3%5,8%2,1%2,6%1,5%
13 Docosia setosa 1,3%2,1%2,3%9,0%2,1%8,2%2,3%5,8%1,8%2,4%1,5%1,0%
14 Boletina nasuta 23,7%23,3%23,6%22,0%23,4%21,2%23,3%25,1%23,2%23,1%23,3%21,7%21,7%
15 Gnoriste bilineata 20,5%20,5%20,3%19,3%20,2%20,1%20,5%21,1%19,6%19,7%20,1%19,0%18,5%12,8%
Figure 5.

Frequency distributions of genetic distances (K2P) for particular gene markers.

Kimura 2-parameter model List of species, sampling locality and year, and accession numbers.

Species description

sp. n.

http://zoobank.org/E75577BA-83A0-4596-BC12-61F22A505225 Figures 1–3
Figures 1–3.

sp. n. (holotype), male terminalia; 1 ventral view 2 tergite 9 in dorsal view 3 right gonostylus in dorsal view. Scale bar = 0.1 mm.

Type material.

Holotype male, in a pinned microvial with glycerol. SLOVAKIA, Muránska planina National Park, Muráň env., Šiance National Nature Reserve, sweeping along forest edge, N48°46'12", E20°04'20", 1005 m a.s.l., 25. May 2012 (J. Ševčík leg.) [SMOC].

Description.

Male (n = 1). Length of wing 4.2 mm. Head blackish brown with numerous pale setae. Three ocelli, with lateral ones almost touching compound eyes, separated from the eye margins by their own diameter. Clypeus blackish, with setae pale. Mouthparts light brownish. Palpus brownish yellow, basally and apically darker. Scape, pedicel and all flagellomeres dark brown. Flagellomeres cylindrical, flagellomeres 1 to 7 about twice as long as broad, apical flagellomeres (8 to 14) slightly conical, three times as long as broad. All parts of thorax blackish brown. All bristles and setae yellowish white. Scutellum with several marginal and submarginal pale bristles and with numerous setae. PageBreakPageBreakPageBreakPageBreakPageBreakAntepronotum and proepisternum with pale bristles and short dark setae. Upper part of antepronotum with a strong pale bristle reaching to the ocellus. Laterotergite and other pleural parts bare. Haltere pale yellow. Legs. All coxae entirely yellow. Femora yellow with hind femur brownish only around its tip. All trochanters blackish brown. Tibiae and tarsi yellow, tarsal segments seemingly brownish because of dense setulae. Fore tibia apicomedially with a semicircular tibial organ (anteroapical depressed area), without strong setae, only densely covered with fine setulae. Mid tibia with 5 anterior, 4 dorsal, 3 anteroventral and 5–6 posterior setae. Hind tibia with 16 anterior, 12 dorsal, 5 anteroventral and 6 posterior setae. Wings hyaline, unmarked. Radial veins and r-m brown, other veins paler while m-stem and the base of M1 are faint, almost not traceable. Sc, Rs and basal third of cu-stem asetose, the other veins setose. Costa reaches to 0.45 of the distance between R5 and M1. Sc ends in R at the level of beginning of m-stem. Posterior fork begins before anterior fork, approximately at the level of the middle of r-m. Abdomen all dark brown. Terminalia (Figs 1–3) dark brown except lighter gonostyli. Tergite 9 in the shape of a rounded square, about as long as broad (Fig. 2). Posteroventral margin of gonocoxites with lateral projections and with two patches of short setae medially (Fig. 1). Gonostylus subtriangular with a row of black megasetae along its ventral margin (Fig. 3). sp. n. (holotype), male terminalia; 1 ventral view 2 tergite 9 in dorsal view 3 right gonostylus in dorsal view. Scale bar = 0.1 mm. Female. Unknown.

Biology.

Unknown.

Etymology.

The species name refers to the structure of gonostylus.

Molecular data

The genetic distances among the 13 species of and two outgroup species for particular gene markers are presented in Tab. 2. The interspecific differences among species ranged from 0.3% (in ITS2 between and ) to 26.0% (in CytB between and ), with the mean interspecific distances for particular genes: 12.8% (COI), 10.3% (COII), 14.9% (CytB) and 4.5% (ITS2). The genetic distances for the nuclear ITS2 marker were remarkably lower than for the mitochondrial markers. Fig. 5 shows that the distribution of K2P distances for cytB is rather broad (6.6–28%), while the distributions for COI, COII and ITS2 are relatively narrow. Kimura 2-parametr genetic distances for COI, COII, CytB and ITS2. The lowest and highest values among species are highlighted in bold. The phylogenetic tree for the concatenated dataset is presented in Fig. 4. The genus was found to be monophyletic with maximum bootstrap support value (BV = 100). Surprisingly, branched basally as a sister group to all the other species included in this analysis, followed by . All the other species grouped together as a monophyletic group with maximum support (BV = 100). Within this group, only and were found to be closely related (BV = 100) while the other relationships between any two species are less supported. Also the monophyly of the group comprising eight terminal species (see Fig. 4) is highly supported (BV = 100). A sister taxon to this group is , while is sister taxon to the entire latter group. Finally, is sister taxon to the all species in this dataset, except and .
Figure 4.

Maximum likelihood hypothesis for relationships among selected species of Winnertz based on DNA sequence data (COI, COII, CytB and ITS2), 2039 characters. Above node number = bootstrap support for ML.

Maximum likelihood hypothesis for relationships among selected species of Winnertz based on DNA sequence data (COI, COII, CytB and ITS2), 2039 characters. Above node number = bootstrap support for ML. Frequency distributions of genetic distances (K2P) for particular gene markers.

Discussion

Affiliation of the new species

According to the key by Laštovka and Ševčík (2006), the new species runs to couplet 10 ( Laštovka & Ševčík, 2006), because of bare laterotergites, yellow coxae and basal flagellomeres relatively long. The structure of the male terminalia is, however, quite different from this species and also from two other species described later ( Ševčík & Laštovka, 2008 and Ševčík & Laštovka, 2008), which would run to couplet 10 too. It is thus difficult to find the closest relative of according to morphological characters. Considering the genetic distance, the closest relative of is , based on COI (6.0 %), COII (5.1%) and CytB (6.6%) gene markers. In the phylogePageBreaknetic tree based on all the four gene markers (Fig. 4), forms a sister branch to a group of the following four species: , , , and .

Comparison of the utility of COI, COII, CytB and ITS2 for barcoding of

The comparison of the four variable gene regions revealed that the genetic distances between species are quite high for CytB and COI, with the average values being 14.9% and 12.8%, respectively. From this point of view, CytB performs as the best barcoding marker for species, followed by the traditional animal barcoding PageBreakregion (COI), COII and ITS2. The ITS2 sequences show remarkably high similarity in the genus and do not appear as a suitable barcode marker in this case. The high uniformity of ITS2 has been reported in several studies (e.g. Lv et al. 2014 or Navajas et al. 1988). At least within , the ITS2 marker may thus possibly be more suitable for intergeneric comparisons and higher phylogeny, similarly as the neighbouring ribosomal 28S region. In mycetophilids, ITS2 has already been successfully used for inferring phylogeny at generic or subgeneric level by Ševčík et al. (2013, 2014). This issue definitely deserves further study. There are many studies comparing the utility of various gene markers for DNA barcoding and the identification of species (e.g. Bourke et al. 2013, Lv et al. 2014, Schwarzfeld and Sperling 2014). Concerning fungus gnats, comparisons between COI and ITS2 were recently provided by Jürgenstein et al. (2015) and Kurina et al. (2015). They both came to the conclusion that COI performed better. The CytB region has mostly been used in the studies devoted to vertebrates but it was recently used also for barcoding of (GilArriortua et al. 2013), tse-tse flies (Orji et al. 2015) or aphids (Chen et al. 2012).

Incongruence between molecular and morphological data

There has been no previous phylogenetical hypothesis for species published to date but if we take into account the characters used in most available keys, there is only little congruence between those morphological characters and the molecular results presented here. For example, does not appear as particularly separated from the other species by morphological characters. It belongs to the group of species with pubescent lateroterites, together with , , , , and several other species, not represented in our molecular dataset. These latter species do not constitute a monophyletic group in the molecular tree (Fig. 4) nor do the species with bare laterotergites. This means that this widely used character (pubescence of laterotergites) has most probably no or little value in reconstructing relationships within the genus. The second widely used character in the keys is the coloration of legs, mainly the coxae, which also does not help much in defining any group congruent with the clades in the molecular tree presented here. Further, it is difficult to find clear morphological synapomorphies for the highly supported clades in the tree (Fig. 4), e.g. for the sister relationship of + (except for the overall resemblance of their male terminalia). Interestingly, in two of the four trees based on one gene region only (in COI and ITS2, data not shown), (not ) branched basally as a sister group to the rest of , a result which would be expected on the basis of morphological and ecological data ( is the only species in the dataset with Sc setose and ending free, different structure of male terminalia, endomycophagous larvae etc.). Nevertheless, the number of species included in this analysis is rather limited to reach any final conclusion. A more comprehensive phylogeny of the genus, as well as of other genera of fungus gnats, is thus needed.
1Laterotergite pubescent 2
Laterotergite bare 9
2 (1)Sc setose and ending free 3
Sc bare and ending in R 4
3 (2)Tergite 9 subrectangular, gonostylus with a patch of fine subapical setae Docosia gilvipes (Walker, 1856)
Tergite 9 distinctly broadened posteriorly, gonostylus without a patch of subapical setae (Kurina 2008: figs 10–15) Docosia pseudogilvipes Kurina, 2008
4 (2)Hind femur completely black or dark brown 5
Hind femur at least partly yellow 6
5 (4)All coxae and palpi black Docosia carbonaria Edwards, 1941
Coxae yellowish brown, wings slightly smoked Docosia fumosa Edwards, 1925
6 (4)Coxae largely dark (at least basal ½), laterotergal setae short Docosia sciarina (Meigen, 1830)
Coxae at most parts yellow, laterotergal setae long as usua 7
7 (6)Mid tibia dorsally with longitudinal black band Docosia tibialis Laštovka & Ševčík, 2006
Mid tibia dorsally yellowish 8
8 (7)Hind coxa basally brown, apical 1/5 and proximoventral part of hind femur darkened Docosia moravica Landrock, 1916
Hind coxa at most with basal margin darkened, hind femur dark only at tip, its ventral surface yellow Docosia flavicoxa Strobl, 1910
9 (1)All coxae dark brown, hind femur largely dark 10
Coxae with at least apical half pale 11
10 (9)Haltere yellowish, male gonocoxites broadly rounded posteriorly (Laštovka and Ševčík 2006: Fig. 7) Docosia fuscipes (von Roser, 1840)
Haltere with a dark knob, male gonocoxites with a deep median incision (Chandler and Blasco-Zumeta 2001: figs 42–47) Docosia morionella Mik, 1884
11 (9)All coxae yellow, hind coxa dark at most on basal 1/6 12
Hind coxa blackish brown at least on the basal third 17
12 (11)Antenna with long basal segments, flagellomere 1 to 4 about twice as long as wide, lateral ocelli distant from eyes 13
Antennal segments shorter, flagellomere 1 to 4 about 1.5 as long as wide, ocelli touching eyes 16
13 (12)Pedicel yellow Docosia chandleri Ševčík & Laštovka, 2008
Pedicel dark brown 14
14 (13)Posteroventral margin of gonocoxites almost straight, with posterolateral projections, gonostylus short, subtriangular (Figs 1, 3) Docosia dentata sp. n.
Posteroventral margin of gonocoxites medially with a distinct rounded projection, gonostylus elongated 15
15 (14)Gonostylus with several unusually thick black megasetae along its ventral margin (Ševčík and Laštovka 2008: fig. 2) Docosia matilei Ševčík & Laštovka, 2008
Gonostylus with black megasetae only apically (Laštovka and Ševčík 2006: fig. 10) Docosia montana Laštovka & Ševčík, 2006
16 (12)Costa extends to ½ distance from R5 to M1 or slightly more, apical 1/5 of hind femur dark Docosia lastovkai Chandler, 1994
Costa extends only to 2/5 distance from R5 to M1, only tip of hind femur dark Docosia landrocki Laštovka & Ševčík, 2006
17 (11)Hind coxa dark only on basal third, haltere entirely yellowish 18
Basal half or slightly more of hind coxa blackish brown 19
18 (17)Lateral ocelli distant from eyes (about a diameter of ocellus), mid coxa dark on basal third, pedicel dark, male tergite 9 subtrapezoidal (Laštovka and Ševčík 2006: fig. 15) Docosia setosa Landrock, 1916
Lateral ocelli touching eyes, mid coxa dark on basal fourth or less, pedicel usually pale, male tergite 9 subcircular (Laštovka and Ševčík 2006: fig. 4) Docosia expectata Laštovka & Ševčík, 2006
19 (17)Costa extends about 2/5 from R5 to M1, palpi yellow, haltere darkened Docosia nigra Landrock, 1928
Costa extends only about 2/7 from R5 to M1, palpi darkened, haltere yellow 20
20 (19)Male terminalia with tergite 9 short, as long as broad, trapezoid, posterior margin of gonocoxites without distinct medioventral process (Kurina and Ševčík 2011: fig. 2) Docosia muranica Kurina & Ševčík, 2011
Male terminalia with tergite 9 long, about twice as long as broad, posterior margin of gonocoxites with distinct medioventral process, hind tibia with a dark patch of modified setae 20
21 (20)Male terminalia with lateral lobes of gonocoxites in ventral view distinctly longer than medioventral process of gonocoxites (Laštovka and Ševčík 2006: fig. 3) Docosia diutina Plassmann, 1996
Male terminalia with lateral lobes of gonocoxites shorter, at most as long as medioventral process of gonocoxites 21
22 (21)Tergite 9 pear-shaped, distinctly broader in posterior half (Laštovka and Ševčík 2006: fig. 13) Docosia pannonica Laštovka & Ševčík, 2006
Tergite 9 subrectangular, not distinctly broader in posterior half (Ševčík 2006: fig. 3) Docosia rohaceki Ševčík, 2006
  14 in total

1.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

Authors:  J Castresana
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

2.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

3.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

4.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

5.  Cytochrome b as a useful tool for the identification of blowflies of forensic interest (Diptera, Calliphoridae).

Authors:  Maite GilArriortua; Marta I Salona Bordas; Laura M Cainé; Fátima Pinheiro; Marian M de Pancorbo
Journal:  Forensic Sci Int       Date:  2013-03-27       Impact factor: 2.395

6.  DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates.

Authors:  O Folmer; M Black; W Hoeh; R Lutz; R Vrijenhoek
Journal:  Mol Mar Biol Biotechnol       Date:  1994-10

7.  The effectiveness of three regions in mitochondrial genome for aphid DNA barcoding: a case in Lachininae.

Authors:  Rui Chen; Li-Yun Jiang; Ge-Xia Qiao
Journal:  PLoS One       Date:  2012-10-03       Impact factor: 3.240

8.  Two new Neuratelia Rondani (Diptera, Mycetophilidae) species from Western Palaearctic: a case of limited congruence between morphology and DNA sequence data.

Authors:  Olavi Kurina; Erki Õunap; Kadri Põldmaa
Journal:  Zookeys       Date:  2015-04-16       Impact factor: 1.546

9.  A multi-locus approach to barcoding in the Anopheles strodei subgroup (Diptera: Culicidae).

Authors:  Brian Patrick Bourke; Tatiane Porangaba Oliveira; Lincoln Suesdek; Eduardo Sterlino Bergo; Maria Anice Mureb Sallum
Journal:  Parasit Vectors       Date:  2013-04-19       Impact factor: 3.876

10.  Assessment of four DNA fragments (COI, 16S rDNA, ITS2, 12S rDNA) for species identification of the Ixodida (Acari: Ixodida).

Authors:  Jizhou Lv; Shaoqiang Wu; Yongning Zhang; Yan Chen; Chunyan Feng; Xiangfen Yuan; Guangle Jia; Junhua Deng; Caixia Wang; Qin Wang; Lin Mei; Xiangmei Lin
Journal:  Parasit Vectors       Date:  2014-03-03       Impact factor: 3.876

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  4 in total

1.  New and poorly known Palaearctic fungus gnats (Diptera, Sciaroidea).

Authors:  Jukka Salmela; Levente-Péter Kolcsár
Journal:  Biodivers Data J       Date:  2017-03-06

2.  A DNA barcode library for 5,200 German flies and midges (Insecta: Diptera) and its implications for metabarcoding-based biomonitoring.

Authors:  Jérôme Morinière; Michael Balke; Dieter Doczkal; Matthias F Geiger; Laura A Hardulak; Gerhard Haszprunar; Axel Hausmann; Lars Hendrich; Ledis Regalado; Björn Rulik; Stefan Schmidt; Johann-Wolfgang Wägele; Paul D N Hebert
Journal:  Mol Ecol Resour       Date:  2019-05-14       Impact factor: 7.090

Review 3.  Current State of DNA Barcoding of Sciaroidea (Diptera)-Highlighting the Need to Build the Reference Library.

Authors:  Jostein Kjærandsen
Journal:  Insects       Date:  2022-01-29       Impact factor: 2.769

4.  Every Single Specimen Counts: A New Docosia Winnertz (Diptera: Mycetophilidae) Species Described from a Singleton.

Authors:  Olavi Kurina; Heli Kirik
Journal:  Insects       Date:  2021-11-29       Impact factor: 2.769

  4 in total

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