Literature DB >> 26843704

Development of Nested PCR-Based Specific Markers for Detection of Peach Rosette Mosaic Virus in Plant Quarantine.

S Lee1, Y G Shin2, J H Kim3, C S Kim1, Y S Kim4, W H Jheong5.   

Abstract

The Peach rosette mosaic virus (PRMV) is a plant pathogen of the genus Nepovirus, and has been designated as a controlled quarantine virus in Korea. In this study, a specific reverse transcription (RT)-PCR marker set, nested PCR marker set, and modified-plasmid positive control were developed to promptly and accurately diagnose PRMV at plant-quarantine sites. The final selected PRMV-specific RT-PCR marker was PRMV-N10/C70 (967 bp), and the nested PCR product of 419 bp was finally amplified. The modified-plasmid positive control, in which the SalI restriction-enzyme region (GTCGAC) was inserted, verified PRMV contamination in a comparison with the control, enabling a more accurate diagnosis. It is expected that the developed method will continuously contribute to the plant-quarantine process in Korea.

Entities:  

Keywords:  Nested PCR; PRMV; Peach rosette mosaic virus; Quarantine; RT-PCR

Year:  2015        PMID: 26843704      PMCID: PMC4729743          DOI: 10.1007/s12088-015-0548-2

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  6 in total

1.  Use of DNA methyltransferase/endonuclease enzyme combinations for megabase mapping of chromosomes.

Authors:  M Nelson; M McClelland
Journal:  Methods Enzymol       Date:  1992       Impact factor: 1.600

2.  An assessment of the phylogenetic relationship among sugarcane and related taxa based on the nucleotide sequence of 5S rRNA intergenic spacers.

Authors:  Y B Pan; D M Burner; B L Legendre
Journal:  Genetica       Date:  2000       Impact factor: 1.082

3.  Development of PCR diagnostic system for detection of the seed-transmitted tobacco ringspot virus in quarantine.

Authors:  S Lee; G Lee; I C Choi; J Y Rho
Journal:  Indian J Microbiol       Date:  2015-02-25       Impact factor: 2.461

4.  A new and sensitive Co-operational polymerase chain reaction for rapid detection of Ralstonia solanacearum in water.

Authors:  Paola Caruso; Edson Bertolini; Mariano Cambra; María M López
Journal:  J Microbiol Methods       Date:  2003-10       Impact factor: 2.363

5.  Development of a PCR Diagnostic System for Iris yellow spot tospovirus in Quarantine.

Authors:  Yong-Gil Shin; Jae-Young Rho
Journal:  Plant Pathol J       Date:  2014-12-15       Impact factor: 1.795

6.  Development and Practical Use of RT-PCR for Seed-transmitted Prune dwarf virus in Quarantine.

Authors:  Siwon Lee; Yong-Gil Shin
Journal:  Plant Pathol J       Date:  2014-06       Impact factor: 1.795

  6 in total

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