Literature DB >> 26840098

An Efficient Computational Approach for the Calculation of the Vibrational Density of States.

Chiara Aieta1, Fabio Gabas1,2, Michele Ceotto1.   

Abstract

We present an optimized approach for the calculation of the density of fully coupled vibrational states in high-dimensional systems. This task is of paramount importance, because partition functions and several thermodynamic properties can be accurately estimated once the density of states is known. A new code, called paradensum, based on the implementation of the Wang-Landau Monte Carlo algorithm for parallel architectures is described and applied to real complex systems. We test the accuracy of paradensum on several molecular systems, including some benchmarks for which an exact evaluation of the vibrational density of states is doable by direct counting. In addition, we find a significant computational speedup with respect to standard approaches when applying our code to molecules up to 66 degrees of freedom. The new code can easily handle 150 degrees of freedom. These features make paradensum a very promising tool for future calculations of thermodynamic properties and thermal rate constants of complex systems.

Year:  2016        PMID: 26840098     DOI: 10.1021/acs.jpca.5b12364

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  3 in total

1.  Application of one-dimensional semiclassical transition state theory to the CH3OH + H ⇌ CH2OH/CH3O + H2 reactions.

Authors:  Xiao Shan; David C Clary
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2018-03-13       Impact factor: 4.226

2.  Heavy Atom Tunneling in Organic Reactions at Coupled Cluster Potential Accuracy with a Parallel Implementation of Anharmonic Constant Calculations and Semiclassical Transition State Theory.

Authors:  Giacomo Mandelli; Chiara Aieta; Michele Ceotto
Journal:  J Chem Theory Comput       Date:  2022-01-07       Impact factor: 6.006

3.  Nuclear Quantum Effects from the Analysis of Smoothed Trajectories: Pilot Study for Water.

Authors:  Dénes Berta; Dávid Ferenc; Imre Bakó; Ádám Madarász
Journal:  J Chem Theory Comput       Date:  2020-04-29       Impact factor: 6.006

  3 in total

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