Literature DB >> 26839441

An Integrated Bayesian Nonparametric Approach for Stochastic and Variability Orders in ROC Curve Estimation: An Application to Endometriosis Diagnosis.

Beom Seuk Hwang1, Zhen Chen1.   

Abstract

In estimating ROC curves of multiple tests, some a priori constraints may exist, either between the healthy and diseased populations within a test or between tests within a population. In this paper, we proposed an integrated modeling approach for ROC curves that jointly accounts for stochastic and variability orders. The stochastic order constrains the distributional centers of the diseased and healthy populations within a test, while the variability order constrains the distributional spreads of the tests within each of the populations. Under a Bayesian nonparametric framework, we used features of the Dirichlet process mixture to incorporate these order constraints in a natural way. We applied the proposed approach to data from the Physician Reliability Study that investigated the accuracy of diagnosing endometriosis using different clinical information. To address the issue of no gold standard in the real data, we used a sensitivity analysis approach that exploited diagnosis from a panel of experts. To demonstrate the performance of the methodology, we conducted simulation studies with varying sample sizes, distributional assumptions and order constraints. Supplementary materials for this article are available online.

Entities:  

Keywords:  Area under the curve; Dirichlet process mixture; Gold standard; Order restricted analysis

Year:  2015        PMID: 26839441      PMCID: PMC4733471          DOI: 10.1080/01621459.2015.1023806

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  19 in total

1.  An interpretation for the ROC curve and inference using GLM procedures.

Authors:  M S Pepe
Journal:  Biometrics       Date:  2000-06       Impact factor: 2.571

2.  A new parametric method based on S-distributions for computing receiver operating characteristic curves for continuous diagnostic tests.

Authors:  Albert Sorribas; Jaume March; Javier Trujillano
Journal:  Stat Med       Date:  2002-05-15       Impact factor: 2.373

3.  Estimation of the area under the ROC curve.

Authors:  David Faraggi; Benjamin Reiser
Journal:  Stat Med       Date:  2002-10-30       Impact factor: 2.373

4.  Bayesian semiparametric ROC curve estimation and disease diagnosis.

Authors:  Adam J Branscum; Wesley O Johnson; Timothy E Hanson; Ian A Gardner
Journal:  Stat Med       Date:  2008-06-15       Impact factor: 2.373

5.  Bayesian semiparametric estimation of covariate-dependent ROC curves.

Authors:  Abel Rodríguez; Julissa C Martínez
Journal:  Biostatistics       Date:  2013-10-29       Impact factor: 5.899

6.  The use of the 'binormal' model for parametric ROC analysis of quantitative diagnostic tests.

Authors:  J A Hanley
Journal:  Stat Med       Date:  1996-07-30       Impact factor: 2.373

7.  Bayesian analysis of ROC curves using Markov-chain Monte Carlo methods.

Authors:  F Peng; W J Hall
Journal:  Med Decis Making       Date:  1996 Oct-Dec       Impact factor: 2.583

8.  Three approaches to regression analysis of receiver operating characteristic curves for continuous test results.

Authors:  M S Pepe
Journal:  Biometrics       Date:  1998-03       Impact factor: 2.571

9.  Nonparametric ROC summary statistics for correlated diagnostic marker data.

Authors:  Liansheng Larry Tang; Aiyi Liu; Zhen Chen; Enrique F Schisterman; Bo Zhang; Zhuang Miao
Journal:  Stat Med       Date:  2012-10-11       Impact factor: 2.373

10.  Bayesian estimation of the receiver operating characteristic curve for a diagnostic test with a limit of detection in the absence of a gold standard.

Authors:  Seyed Reza Jafarzadeh; Wesley O Johnson; Jessica M Utts; Ian A Gardner
Journal:  Stat Med       Date:  2010-09-10       Impact factor: 2.373

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  2 in total

1.  Discriminatory capacity of prenatal ultrasound measures for large-for-gestational-age birth: A Bayesian approach to ROC analysis using placement values.

Authors:  Soutik Ghosal; Zhen Chen
Journal:  Stat Biosci       Date:  2021-06-05

2.  Diagnostic test evaluation methodology: A systematic review of methods employed to evaluate diagnostic tests in the absence of gold standard - An update.

Authors:  Chinyereugo M Umemneku Chikere; Kevin Wilson; Sara Graziadio; Luke Vale; A Joy Allen
Journal:  PLoS One       Date:  2019-10-11       Impact factor: 3.240

  2 in total

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