Literature DB >> 26833149

Whole-Genome Sequence of a blaOXA-48-Harboring Raoultella ornithinolytica Clinical Isolate from Lebanon.

Charbel Al-Bayssari1, Abiola Olumuyiwa Olaitan2, Thongpan Leangapichart2, Liliane Okdah2, Fouad Dabboussi3, Monzer Hamze3, Jean-Marc Rolain4.   

Abstract

We analyzed the whole-genome sequence of ablaOXA-48-harboringRaoultella ornithinolyticaclinical isolate from a patient in Lebanon. The size of theRaoultella ornithinolyticaCMUL058 genome was 5,622,862 bp, with a G+C content of 55.7%. We deciphered all the molecular mechanisms of antibiotic resistance, and we compared our genome to other availableR. ornithinolyticagenomes in GenBank. The resistome consisted of 9 antibiotic resistance genes, including a plasmidicblaOXA-48gene whose genetic organization is also described.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID： 26833149      PMCID： PMC4808190          DOI： 10.1128/AAC.02773-15

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN： 0066-4804            Impact factor:   5.191


  22 in total

1.  Multiplex PCR for rapid detection of genes encoding acquired metallo-beta-lactamases.

Authors:  Matthew J Ellington; James Kistler; David M Livermore; Neil Woodford
Journal:  J Antimicrob Chemother       Date:  2006-12-21       Impact factor: 5.790

2.  Spread of OXA-48-encoding plasmid in Turkey and beyond.

Authors:  Amélie Carrër; Laurent Poirel; Mesut Yilmaz; Ozay Arikan Akan; Cilli Feriha; Gaëlle Cuzon; Ghassan Matar; Patrick Honderlick; Patrice Nordmann
Journal:  Antimicrob Agents Chemother       Date:  2010-01-19       Impact factor: 5.191

3.  Phylogenetic analyses of Klebsiella species delineate Klebsiella and Raoultella gen. nov., with description of Raoultella ornithinolytica comb. nov., Raoultella terrigena comb. nov. and Raoultella planticola comb. nov.

Authors:  M Drancourt; C Bollet; A Carta; P Rousselier
Journal:  Int J Syst Evol Microbiol       Date:  2001-05       Impact factor: 2.747

4.  NDM-1-producing Enterobacteriaceae in a teaching hospital in Shanghai, China: IncX3-type plasmids may contribute to the dissemination of blaNDM-1.

Authors:  Hongping Qu; Xiaoli Wang; Yuxing Ni; Jialin Liu; Ruoming Tan; Jie Huang; Lei Li; Jingyong Sun
Journal:  Int J Infect Dis       Date:  2015-03-02       Impact factor: 3.623

5.  Enteric fever-like syndrome caused by Raoultella ornithinolytica (Klebsiella ornithinolytica).

Authors:  Victoria Pulian Morais; Matilde Trigo Daporta; Alberto Fernandez Bao; Marta Garcia Campello; Guillermo Quindós Andrés
Journal:  J Clin Microbiol       Date:  2009-01-14       Impact factor: 5.948

6.  Raoultella ornithinolytica bacteremia in an infant with visceral heterotaxy.

Authors:  Nicole Mau; Lawrence A Ross
Journal:  Pediatr Infect Dis J       Date:  2010-05       Impact factor: 2.129

7.  PHAST: a fast phage search tool.

Authors:  You Zhou; Yongjie Liang; Karlene H Lynch; Jonathan J Dennis; David S Wishart
Journal:  Nucleic Acids Res       Date:  2011-06-14       Impact factor: 16.971

8.  Reordering contigs of draft genomes using the Mauve aligner.

Authors:  Anna I Rissman; Bob Mau; Bryan S Biehl; Aaron E Darling; Jeremy D Glasner; Nicole T Perna
Journal:  Bioinformatics       Date:  2009-06-10       Impact factor: 6.937

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
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  7 in total

Review 1.  The rapid spread of carbapenem-resistant Enterobacteriaceae.

Authors:  Robert F Potter; Alaric W D'Souza; Gautam Dantas
Journal:  Drug Resist Updat       Date:  2016-09-19       Impact factor: 18.500

2.  Enhanced Bacterial Growth and Gene Expression of D-Amino Acid Dehydrogenase With D-Glutamate as the Sole Carbon Source.

Authors:  Takeshi Naganuma; Yoshiakira Iinuma; Hitomi Nishiwaki; Ryota Murase; Kazuo Masaki; Ryosuke Nakai
Journal:  Front Microbiol       Date:  2018-09-04       Impact factor: 5.640

Review 3.  Role of Institut Hospitalo-Universitaire Méditerranée Infection in the surveillance of resistance to antibiotics and training of students in the Mediterranean basin and in African countries.

Authors:  L Peyclit; A Chanteloup; L Hadjadj; J-M Rolain
Journal:  New Microbes New Infect       Date:  2018-06-14

4.  Comprehensive Genome Analysis of Carbapenem-Resistant Raoultella spp. strains, an Emerging Multidrug-Resistant Bacteria in Hospitals.

Authors:  Xiao Yu; Beiwen Zheng; Jing Zhang; Hao Xu; Tingting Xiao; Yanzi Zhou; Shuntian Zhang; Yunying Zhu; Yuan Wang; Yonghong Xiao
Journal:  Antimicrob Agents Chemother       Date:  2019-09-30       Impact factor: 5.191

5.  Sharing of carbapenemase-encoding plasmids between Enterobacteriaceae in UK sewage uncovered by MinION sequencing.

Authors:  Catherine Ludden; Sandra Reuter; Kim Judge; Theodore Gouliouris; Beth Blane; Francesc Coll; Plamena Naydenova; Martin Hunt; Alan Tracey; Katie L Hopkins; Nicholas M Brown; Neil Woodford; Julian Parkhill; Sharon J Peacock
Journal:  Microb Genom       Date:  2017-07-04

Review 6.  Understanding the Epidemiology of Multi-Drug Resistant Gram-Negative Bacilli in the Middle East Using a One Health Approach.

Authors:  Iman Dandachi; Amer Chaddad; Jason Hanna; Jessika Matta; Ziad Daoud
Journal:  Front Microbiol       Date:  2019-08-23       Impact factor: 5.640

7.  Clonal Dissemination of Plasmid-Mediated Carbapenem and Colistin Resistance in Refugees Living in Overcrowded Camps in North Lebanon.

Authors:  Adel Azour; Charbel Al-Bayssari; Tania Nawfal Dagher; Faraj Fajloun; Mark Fajloun; Jean-Marc Rolain
Journal:  Antibiotics (Basel)       Date:  2021-12-02
  7 in total

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