Literature DB >> 26831930

Geographically driven adaptation of chilli veinal mottle virus revealed by genetic diversity analysis of the coat protein gene.

Fangluan Gao1, Jing Jin1, Wenchao Zou1, Furong Liao2, Jianguo Shen3.   

Abstract

Chilli veinal mottle virus (ChiVMV) is an important plant pathogen with a wide host range. The genetic structure of ChiVMV was investigated by analyzing the coat protein (CP) genes of 87 ChiVMV isolates from seven Asian regions. Pairwise F ST values between ChiVMV populations ranged from 0.108 to 0.681, indicating a significant spatial structure for this pathogen. In phylogeny-trait association analysis, the viral isolates from the same region tended to group together, showing a distinct geographic feature. These results suggest that geographic driven adaptation may be an important determinant of the genetic diversity of ChiVMV.

Entities:  

Keywords:  Chilli veinal mottle virus; phylogeny-trait association analysis; positive selection; recombination

Mesh：

Substances：

Year:  2016        PMID： 26831930     DOI： 10.1007/s00705-016-2761-7

Source DB:  PubMed          Journal:  Arch Virol        ISSN： 0304-8608            Impact factor:   2.574


  6 in total

1.  Glucose-6-phosphate dehydrogenase promotes the infection of Chilli veinal mottle virus through affecting ROS signaling in Nicotiana benthamiana.

Authors:  Daoyong Yang; Qiding Peng; Yongchao Cheng; Dehui Xi
Journal:  Planta       Date:  2022-10-10       Impact factor: 4.540

2.  Molecular Evolutionary Analysis of Potato Virus Y Infecting Potato Based on the VPg Gene.

Authors:  Yanzhi Mao; Xuhong Sun; Jianguo Shen; Fangluan Gao; Guangwei Qiu; Teng Wang; Xianzhou Nie; Wei Zhang; Yanling Gao; Yanju Bai
Journal:  Front Microbiol       Date:  2019-07-26       Impact factor: 5.640

3.  Chilli veinal mottle virus HCPro interacts with catalase to facilitate virus infection in Nicotiana tabacum.

Authors:  Ting Yang; Long Qiu; Wanying Huang; Qianyi Xu; Jialing Zou; Qiding Peng; Honghui Lin; Dehui Xi
Journal:  J Exp Bot       Date:  2020-09-19       Impact factor: 6.992

4.  Identification of Two New Isolates of Chilli veinal mottle virus From Different Regions in China: Molecular Diversity, Phylogenetic and Recombination Analysis.

Authors:  Shaofei Rao; Xuwei Chen; Shiyou Qiu; Jiejun Peng; Hongying Zheng; Yuwen Lu; Guanwei Wu; Jianping Chen; Wen Jiang; Yachun Zhang; Fei Yan
Journal:  Front Microbiol       Date:  2020-12-23       Impact factor: 5.640

5.  Genetic diversity and molecular evolution of Ornithogalum mosaic virus based on the coat protein gene sequence.

Authors:  Fangluan Gao; Zhenguo Du; Jianguo Shen; Hongkai Yang; Furong Liao
Journal:  PeerJ       Date:  2018-03-27       Impact factor: 2.984

6.  Characterization and a RT-RPA assay for rapid detection of Chilli Veinal mottle virus (ChiVMV) in tobacco.

Authors:  Yubing Jiao; Chuantao Xu; Jialun Li; Yong Gu; Chun Xia; Qiang Xie; Yunbo Xie; Mengnan An; Zihao Xia; Yuanhua Wu
Journal:  Virol J       Date:  2020-03-10       Impact factor: 4.099
  6 in total

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