Literature DB >> 26831080

Sequential activation and distinct functions for distal and proximal modules within the IgH 3' regulatory region.

Armand Garot1, Marie Marquet2, Alexis Saintamand1, Sébastien Bender3, Sandrine Le Noir1, Pauline Rouaud1, Claire Carrion1, Zéliha Oruc1, Anne-Gaëlle Bébin1, Jeanne Moreau1, Kevin Lebrigand4, Yves Denizot1, Frederick W Alt5, Michel Cogné6, Eric Pinaud7.   

Abstract

As a master regulator of functional Ig heavy chain (IgH) expression, the IgH 3' regulatory region (3'RR) controls multiple transcription events at various stages of B-cell ontogeny, from newly formed B cells until the ultimate plasma cell stage. The IgH 3'RR plays a pivotal role in early B-cell receptor expression, germ-line transcription preceding class switch recombination, interactions between targeted switch (S) regions, variable region transcription before somatic hypermutation, and antibody heavy chain production, but the functional ranking of its different elements is still inaccurate, especially that of its evolutionarily conserved quasi-palindromic structure. By comparing relevant previous knockout (KO) mouse models (3'RR KO and hs3b-4 KO) to a novel mutant devoid of the 3'RR quasi-palindromic region (3'PAL KO), we pinpointed common features and differences that specify two distinct regulatory entities acting sequentially during B-cell ontogeny. Independently of exogenous antigens, the 3'RR distal part, including hs4, fine-tuned B-cell receptor expression in newly formed and naïve B-cell subsets. At mature stages, the 3'RR portion including the quasi-palindrome dictated antigen-dependent locus remodeling (global somatic hypermutation and class switch recombination to major isotypes) in activated B cells and antibody production in plasma cells.

Entities:  

Keywords:  B-cell development; enhancers; immunoglobulin gene regulation

Mesh:

Substances:

Year:  2016        PMID: 26831080      PMCID: PMC4760834          DOI: 10.1073/pnas.1514090113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  49 in total

1.  Localization of the 3' IgH locus elements that effect long-distance regulation of class switch recombination.

Authors:  E Pinaud; A A Khamlichi; C Le Morvan; M Drouet; V Nalesso; M Le Bert; M Cogné
Journal:  Immunity       Date:  2001-08       Impact factor: 31.745

2.  In vivo redundant function of the 3' IgH regulatory element HS3b in the mouse.

Authors:  Anne-Gaëlle Bébin; Claire Carrion; Marie Marquet; Nadine Cogné; Sandrine Lecardeur; Michel Cogné; Eric Pinaud
Journal:  J Immunol       Date:  2010-02-22       Impact factor: 5.422

3.  CCCTC-binding factor (CTCF) and cohesin influence the genomic architecture of the Igh locus and antisense transcription in pro-B cells.

Authors:  Stephanie C Degner; Jiyoti Verma-Gaur; Timothy P Wong; Claudia Bossen; G Michael Iverson; Ali Torkamani; Christian Vettermann; Yin C Lin; Zhongliang Ju; Danae Schulz; Caroline S Murre; Barbara K Birshtein; Nicholas J Schork; Mark S Schlissel; Roy Riblet; Cornelis Murre; Ann J Feeney
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-23       Impact factor: 11.205

4.  Homologous elements hs3a and hs3b in the 3' regulatory region of the murine immunoglobulin heavy chain (Igh) locus are both dispensable for class-switch recombination.

Authors:  Yi Yan; Joyce Pieretti; Zhongliang Ju; Shiniu Wei; John R Christin; Fatmata Bah; Barbara K Birshtein; Laurel A Eckhardt
Journal:  J Biol Chem       Date:  2011-06-14       Impact factor: 5.157

5.  Germline deletion of Igh 3' regulatory region elements hs 5, 6, 7 (hs5-7) affects B cell-specific regulation, rearrangement, and insulation of the Igh locus.

Authors:  Sabrina A Volpi; Jiyoti Verma-Gaur; Rabih Hassan; Zhongliang Ju; Sergio Roa; Sanjukta Chatterjee; Uwe Werling; Harry Hou; Britta Will; Ulrich Steidl; Matthew Scharff; Winfried Edelman; Ann J Feeney; Barbara K Birshtein
Journal:  J Immunol       Date:  2012-02-17       Impact factor: 5.422

6.  Analysis of transforming growth factor-beta1-induced Ig germ-line gamma2b transcription and its implication for IgA isotype switching.

Authors:  Seok-Rae Park; Goo-Young Seo; Ae-Jin Choi; Janet Stavnezer; Pyeung-Hyeun Kim
Journal:  Eur J Immunol       Date:  2005-03       Impact factor: 5.532

7.  Recombination and transcription of the endogenous Ig heavy chain locus is effected by the Ig heavy chain intronic enhancer core region in the absence of the matrix attachment regions.

Authors:  E Sakai; A Bottaro; L Davidson; B P Sleckman; F W Alt
Journal:  Proc Natl Acad Sci U S A       Date:  1999-02-16       Impact factor: 11.205

8.  Regulation of IgH gene assembly: role of the intronic enhancer and 5'DQ52 region in targeting DHJH recombination.

Authors:  Roshi Afshar; Steven Pierce; Daniel J Bolland; Anne Corcoran; Eugene M Oltz
Journal:  J Immunol       Date:  2006-02-15       Impact factor: 5.422

9.  Ikaros controls isotype selection during immunoglobulin class switch recombination.

Authors:  MacLean Sellars; Bernardo Reina-San-Martin; Philippe Kastner; Susan Chan
Journal:  J Exp Med       Date:  2009-05-04       Impact factor: 14.307

10.  HoxC4 binds to the promoter of the cytidine deaminase AID gene to induce AID expression, class-switch DNA recombination and somatic hypermutation.

Authors:  Seok-Rae Park; Hong Zan; Zsuzsanna Pal; Jinsong Zhang; Ahmed Al-Qahtani; Egest J Pone; Zhenming Xu; Thach Mai; Paolo Casali
Journal:  Nat Immunol       Date:  2009-04-12       Impact factor: 25.606

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  11 in total

1.  Binding of estrogen receptors to switch sites and regulatory elements in the immunoglobulin heavy chain locus of activated B cells suggests a direct influence of estrogen on antibody expression.

Authors:  Bart G Jones; Rhiannon R Penkert; Beisi Xu; Yiping Fan; Geoff Neale; Patricia J Gearhart; Julia L Hurwitz
Journal:  Mol Immunol       Date:  2016-08-03       Impact factor: 4.407

Review 2.  RNA Exosome and Non-coding RNA-Coupled Mechanisms in AID-Mediated Genomic Alterations.

Authors:  Brice Laffleur; Uttiya Basu; Junghyun Lim
Journal:  J Mol Biol       Date:  2017-01-07       Impact factor: 5.469

3.  Class-Switch Recombination in the Absence of the IgH 3' Regulatory Region.

Authors:  Ahrom Kim; Li Han; Gabriel E Santiago; Ramiro E Verdun; Kefei Yu
Journal:  J Immunol       Date:  2016-08-24       Impact factor: 5.422

4.  Complex sex-biased antibody responses: estrogen receptors bind estrogen response elements centered within immunoglobulin heavy chain gene enhancers.

Authors:  Bart G Jones; Robert E Sealy; Rhiannon R Penkert; Sherri L Surman; Robert W Maul; Geoff Neale; Beisi Xu; Patricia J Gearhart; Julia L Hurwitz
Journal:  Int Immunol       Date:  2019-03-05       Impact factor: 5.071

Review 5.  The IgH 3' regulatory region and c-myc-induced B-cell lymphomagenesis.

Authors:  Nour Ghazzaui; Alexis Saintamand; Hussein Issaoui; Christelle Vincent-Fabert; Yves Denizot
Journal:  Oncotarget       Date:  2017-01-24

6.  Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia.

Authors:  Liqing Tian; Ying Shao; Stephanie Nance; Jinjun Dang; Beisi Xu; Xiaotu Ma; Yongjin Li; Bensheng Ju; Li Dong; Scott Newman; Xin Zhou; Patrick Schreiner; Elizabeth Tseng; Ting Hon; Meredith Ashby; Chunliang Li; John Easton; Tanja A Gruber; Jinghui Zhang
Journal:  Nat Commun       Date:  2019-06-26       Impact factor: 14.919

Review 7.  Long-Range Control of Class Switch Recombination by Transcriptional Regulatory Elements.

Authors:  Audrey Dauba; Ahmed Amine Khamlichi
Journal:  Front Immunol       Date:  2021-09-14       Impact factor: 7.561

8.  Evidence for a quadruplex structure in the polymorphic hs1.2 enhancer of the immunoglobulin heavy chain 3' regulatory regions and its conservation in mammals.

Authors:  Marco Sette; Pietro D'Addabbo; Geoffrey Kelly; Alessandro Cicconi; Emanuela Micheli; Stefano Cacchione; Anna Poma; Cesare Gargioli; Vincenzo Giambra; Domenico Frezza
Journal:  Biopolymers       Date:  2016-11       Impact factor: 2.505

9.  3'Igh enhancers hs3b/hs4 are dispensable for Myc deregulation in mouse plasmacytomas with T(12;15) translocations.

Authors:  Alexander L Kovalchuk; Tomomi Sakai; Chen-Feng Qi; Wendy Du Bois; Wesley A Dunnick; Michel Cogné; Herbert C Morse
Journal:  Oncotarget       Date:  2018-10-02

10.  The Chromatin Reader ZMYND8 Regulates Igh Enhancers to Promote Immunoglobulin Class Switch Recombination.

Authors:  Verónica Delgado-Benito; Daniel B Rosen; Qiao Wang; Anna Gazumyan; Joy A Pai; Thiago Y Oliveira; Devakumar Sundaravinayagam; Wenzhu Zhang; Matteo Andreani; Lisa Keller; Kyong-Rim Kieffer-Kwon; Aleksandra Pękowska; Seolkyoung Jung; Madlen Driesner; Roman I Subbotin; Rafael Casellas; Brian T Chait; Michel C Nussenzweig; Michela Di Virgilio
Journal:  Mol Cell       Date:  2018-10-04       Impact factor: 17.970

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