Literature DB >> 2683084

Chromosomal location and evolutionary rate variation in enterobacterial genes.

P M Sharp1, D C Shields, K H Wolfe, W H Li.   

Abstract

The basal rate of DNA sequence evolution in enterobacteria, as seen in the extent of divergence between Escherichia coli and Salmonella typhimurium, varies greatly among genes, even when only "silent" sites are considered. The degree of divergence is clearly related to the level of gene expression, reflecting constraints on synonymous codon choice. However, where this constraint is weak, among genes not expressed at high levels, divergence is also related to the chromosomal location of the gene; it appears that genes furthest away from oriC, the origin of replication, have a mutation rate approximately two times that of genes near oriC.

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Year:  1989        PMID: 2683084     DOI: 10.1126/science.2683084

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  54 in total

1.  A phylogenomic study of DNA repair genes, proteins, and processes.

Authors:  J A Eisen; P C Hanawalt
Journal:  Mutat Res       Date:  1999-12-07       Impact factor: 2.433

Review 2.  Mutation frequencies and antibiotic resistance.

Authors:  J L Martinez; F Baquero
Journal:  Antimicrob Agents Chemother       Date:  2000-07       Impact factor: 5.191

3.  Codon usage patterns in cytochrome oxidase I across multiple insect orders.

Authors:  Joshua T Herbeck; John Novembre
Journal:  J Mol Evol       Date:  2003-06       Impact factor: 2.395

Review 4.  Forces that influence the evolution of codon bias.

Authors:  Paul M Sharp; Laura R Emery; Kai Zeng
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

Review 5.  Biased gene conversion, copy number, and apparent mutation rate differences within chloroplast and bacterial genomes.

Authors:  C W Birky; J B Walsh
Journal:  Genetics       Date:  1992-03       Impact factor: 4.562

6.  Evolution of gene sequence in response to chromosomal location.

Authors:  Carlos Díaz-Castillo; Kent G Golic
Journal:  Genetics       Date:  2007-09       Impact factor: 4.562

7.  Formation and expression of pseudogenes on the B chromosome of rye.

Authors:  Ali Mohammad Banaei-Moghaddam; Karla Meier; Raheleh Karimi-Ashtiyani; Andreas Houben
Journal:  Plant Cell       Date:  2013-07-09       Impact factor: 11.277

8.  DNA replication timing and selection shape the landscape of nucleotide variation in cancer genomes.

Authors:  Yong H Woo; Wen-Hsiung Li
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

9.  Correlation of GC content with replication timing and repair mechanisms in weakly expressed E.coli genes.

Authors:  P Deschavanne; J Filipski
Journal:  Nucleic Acids Res       Date:  1995-04-25       Impact factor: 16.971

10.  The XbaI-BlnI-CeuI genomic cleavage map of Salmonella typhimurium LT2 determined by double digestion, end labelling, and pulsed-field gel electrophoresis.

Authors:  S L Liu; A Hessel; K E Sanderson
Journal:  J Bacteriol       Date:  1993-07       Impact factor: 3.490

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