| Literature DB >> 26820065 |
Bradford D Gessner1,2, Thalia Wood1,2, Monique A Johnson3, Carolyn Sue Richards3, David M Koeller3,4.
Abstract
PURPOSE: Infant mortality in Alaska is highest among Alaska Native people from western/northern Alaska, a population with a high prevalence of a genetic variant (c.1436C>T; the arctic variant) of carnitine palmitoyltransferase 1A (CPT1A).Entities:
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Year: 2016 PMID: 26820065 PMCID: PMC4965343 DOI: 10.1038/gim.2015.197
Source DB: PubMed Journal: Genet Med ISSN: 1098-3600 Impact factor: 8.822
Characteristics of Study Population
| Characteristic | Cases (N=110) | Controls (N=395) | Chi-square (p-value) | |
|---|---|---|---|---|
| Genotype | Homozygous variant | 46 (42%) | 119 (30%) | 5.5 (0.06) |
| Heterozygous | 33 (30%) | 150 (38%) | ||
| Homozygous wildtype | 31 (28%) | 126 (32%) | ||
| Residence in Western/Northern Alaska | 58 (53%) | 185 (47%) | 1.2 (0.27) | |
| Involvement of father | Married | 24 (22%) | 135 (34%) | 26 (<0.001) |
| Unmarried: Father's name on birth certificate | 48 (44%) | 206 (52%) | ||
| Unmarried: Father's name not on birth certificate | 38 (35%) | 54 (14%) | ||
| Maternal prenatal alcohol/tobacco use | 63 (57%) | 156 (40%) | 12 (0.001) | |
| Maternal education | <12 years | 37 (35%) | 96 (25%) | 5.0 (0.08) |
| 12 years | 55 (52%) | 225 (58%) | ||
| >12 years | 13 (12%) | 67 (17%) | ||
| Female gender | 53 (48%) | 207 (52%) | 0.6 (0.43) | |
| Gestational age | <32 weeks | 11 (10%) | 3 (0.8%) | 31 (<0.001) |
| 32-36 weeks | 17 (16%) | 39 (10%) | ||
| 37+ weeks | 81 (74%) | 350 (89%) | ||
| Birth weight | <1500 g | 8 (7%) | 2 (0.5%) | 23 (<0.001) |
| 1500-2499 g | 8 (7%) | 15 (4%) | ||
| 2500+ g | 94 (86%) | 377 (96%) | ||
Association between Homozygosity for the Arctic Variant of CPT1A and Infant Mortality
| Analytic Subgroup | Rate of Homozygosity for the Arctic Variant | Odds ratio (95% CI) | Adjusted[ | ||
|---|---|---|---|---|---|
| Cases | Controls | ||||
| All birth weights | All subjects[ | 46 of 110 (42%) | 119 of 395 (30%) | 1.7 (1.1, 2.6) | 1.8 (1.1, 2.9) |
| Homozygous or heterozygous variant[ | 46 of 79 (58%) | 119 of 269 (44%) | 1.8 (1.1, 2.9) | 2.3 (1.3, 4.0) | |
| Residents of Western and Northern Alaska[ | 38 of 58 (66%) | 112 of 185 (61%) | 1.8 (0.98, 3.3) | 2.5 (1.3, 5.0) | |
| Birth weight ≥ 2,500 g. | All subjects[ | 39 of 94 (41%) | 112 of 377 (30%) | 1.7 (1.1, 2.7) | 1.8 (1.1, 2.9) |
| Homozygous or heterozygous variant[ | 39 of 69 (57%) | 112 of 258 (43%) | 1.7 (0.99, 2.9) | 2.2 (1.2, 3.9) | |
| Residents of Western and Northern Alaska[ | 33 of 48 (69%) | 88 of 154 (57%) | 2.2 (1.1, 4.2) | 3.0 (1.4, 6.3) | |
Adjusted for maternal education, maternal prenatal alcohol and tobacco use, and a composite variable combining marital status and presence of the father's name on the birth certificate.
For these analyses, cases and controls were classified as either homozygous or non-homozygous variant
For these analyses, cases and controls were classified as either homozygous or heterozygous variant
Association between the Arctic Variant of CPT1A and Cause of Death
| Genotype | |||
|---|---|---|---|
| Cause of death | Homozygous variant (n=46) | Heterozygous or homozygous wildtype (n=64) | Odds ratio (95% CI) |
| SIDS or asphyxia of unknown etiology (n=44, 40%) | 14 (30%) | 30 (47%) | 0.50 (0.22, 1.1) |
| Congenital anomaly (n=20, 18%) | 8 (17%) | 12 (19%) | 0.91 (0.34, 2.4) |
| Infectious disease (n=19, 17%) | 12 (26%) | 7 (11%) | 2.9 (1.0, 8.0) |
| Trauma / Injury (n=11, 10%) | 5 (11%) | 6 (9%) | 1.2 (0.34, 4.1) |
| Other / Unknown[ | 9 (20%) | 13 (20%) | |
Includes perinatal events (n=4), drug exposure (n=4), abuse or neglect (n=3), preterm birth (n=1), and other/unknown (n=10).
Association between the Arctic Variant of CPT1A and Health History
| Genotype | |||
|---|---|---|---|
| Clinical outcome (number with outcome, percent of all evaluated infants) | Homozygous variant (n=45) (percent with outcome) | Heterozygous or homozygous wildtype (n=62) (percent with outcome) | OR (95%CI) |
| Any hospitalization (n=19, 18%) | 14 (31%) | 5 (8%) | 5.1 (1.7, 16) |
| Pneumonia[ | 9 (20%) | 1 (2%) | 15 (1.9, 125) |
| Sepsis or meningitis[ | 9 (20%) | 5 (8%) | 2.9 (0.88, 9.2) |
Five of the 10 pneumonias and 12 of the 14 sepsis/meningitis episodes occurred during the newborn period.