Literature DB >> 26817480

Proteogenomics: Opportunities and Caveats.

Lampros Dimitrakopoulos1, Ioannis Prassas2, Eleftherios P Diamandis3, Alexey Nesvizhskii4, Thomas Kislinger5, Jacob Jaffe6, Andrei Drabovich7.   

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Year:  2016        PMID： 26817480     DOI： 10.1373/clinchem.2015.247858

Source DB:  PubMed          Journal:  Clin Chem        ISSN： 0009-9147            Impact factor:   8.327


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  11 in total

1.  GAPP: A Proteogenomic Software for Genome Annotation and Global Profiling of Post-translational Modifications in Prokaryotes.

Authors:  Jia Zhang; Ming-Kun Yang; Honghui Zeng; Feng Ge
Journal:  Mol Cell Proteomics       Date:  2016-09-14       Impact factor: 5.911

2.  Discovery of a Human Testis-specific Protein Complex TEX101-DPEP3 and Selection of Its Disrupting Antibodies.

Authors:  Christina Schiza; Dimitrios Korbakis; Efstratia Panteleli; Keith Jarvi; Andrei P Drabovich; Eleftherios P Diamandis
Journal:  Mol Cell Proteomics       Date:  2018-08-10       Impact factor: 5.911

Review 3.  Proteomics advances for precision therapy in ovarian cancer.

Authors:  Marilyne Labrie; Nicholas D Kendsersky; Hongli Ma; Lydia Campbell; Jennifer Eng; Koei Chin; Gordon B Mills
Journal:  Expert Rev Proteomics       Date:  2019-09-13       Impact factor: 3.940

Review 4.  Clinical potential of mass spectrometry-based proteogenomics.

Authors:  Bing Zhang; Jeffrey R Whiteaker; Andrew N Hoofnagle; Geoffrey S Baird; Karin D Rodland; Amanda G Paulovich
Journal:  Nat Rev Clin Oncol       Date:  2019-04       Impact factor: 66.675

5.  Proteoform Identification by Combining RNA-Seq and Top-Down Mass Spectrometry.

Authors:  Wenrong Chen; Xiaowen Liu
Journal:  J Proteome Res       Date:  2020-11-12       Impact factor: 4.466

6.  A linear programming computational framework integrates phosphor-proteomics and prior knowledge to predict drug efficacy.

Authors:  Zhiwei Ji; Bing Wang; Ke Yan; Ligang Dong; Guanmin Meng; Lei Shi
Journal:  BMC Syst Biol       Date:  2017-12-21

7.  A deep proteome and transcriptome abundance atlas of 29 healthy human tissues.

Authors:  Dongxue Wang; Basak Eraslan; Thomas Wieland; Björn Hallström; Thomas Hopf; Daniel Paul Zolg; Jana Zecha; Anna Asplund; Li-Hua Li; Chen Meng; Martin Frejno; Tobias Schmidt; Karsten Schnatbaum; Mathias Wilhelm; Frederik Ponten; Mathias Uhlen; Julien Gagneur; Hannes Hahne; Bernhard Kuster
Journal:  Mol Syst Biol       Date:  2019-02-18       Impact factor: 11.429

8.  Identification of TEX101-associated Proteins Through Proteomic Measurement of Human Spermatozoa Homozygous for the Missense Variant rs35033974.

Authors:  Christina Schiza; Dimitrios Korbakis; Keith Jarvi; Eleftherios P Diamandis; Andrei P Drabovich
Journal:  Mol Cell Proteomics       Date:  2018-11-14       Impact factor: 5.911

9.  N-terminal Proteomics Assisted Profiling of the Unexplored Translation Initiation Landscape in Arabidopsis thaliana.

Authors:  Patrick Willems; Elvis Ndah; Veronique Jonckheere; Simon Stael; Adriaan Sticker; Lennart Martens; Frank Van Breusegem; Kris Gevaert; Petra Van Damme
Journal:  Mol Cell Proteomics       Date:  2017-04-21       Impact factor: 5.911

Review 10.  Proteomics insights into DNA damage response and translating this knowledge to clinical strategies.

Authors:  Louise von Stechow; Jesper V Olsen
Journal:  Proteomics       Date:  2016-12-12       Impact factor: 3.984
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