Literature DB >> 26814669

Chemical diversity of labdane-type bicyclic diterpene biosynthesis in Actinomycetales microorganisms.

Yuuki Yamada1, Mamoru Komatsu1, Haruo Ikeda1.   

Abstract

Five pairs of bacterial type-A and type-B diterpene synthases have been characterized: BAD86798/BAD86797, AHK61133/AHK61132, BAB39207/BAB39206, CldD/CldB and RmnD/RmnB, and are involved in the formation of pimara-9(11),15-diene, terpente-3,13,15-triene and labda-8(17),12(E),14-triene. Mining of bacterial genome data revealed an additional four pairs of type-A and type-B diterpene synthases: Sros_3191/Sros_3192 of Streptosporangium roseum DSM 43021, Sare_1287/Sare_1288 of Salinispora arenicola CNS-205, SCLAV_5671/SCLAV_5672 and SCLAV_p0491/SCLAV_p0490 of Streptomyces clavuligerus ATCC 27064. Since SCLAV_p0491/SCLAV_p0490 is similar to the labdane-type diterpene synthase pairs, CldD/CldB and RmnD/RmnB based on the alignment of the deduced amino acid sequences and phylogenetic analyses of the aligned sequences, these predicted diterpene synthases were characterized by an enzymatic reaction using a pair of recombinant type-A and type-B diterpene synthases prepared in Escherichia coli and the heterologous expression of two genes encoding type-A and type-B diterpene synthases in an engineered Streptomyces host. The generation of labda-8(17),12(E),14-triene (1) by CldB and CldD was reconfirmed by enzymatic synthesis. Furthermore, labda-8(17),13(16),14-triene (2) was generated by SCLAV_p0491 and CldB, and ladba-7,12(E),14-triene (3) by CldD and SCLAV_p0490. SCLAV_p0491 and SCLAV_p0490 catalyzed the generation of the novel diterpene hydrocarbon, labda-7,13(16),14-triene (4).

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 26814669     DOI: 10.1038/ja.2015.147

Source DB:  PubMed          Journal:  J Antibiot (Tokyo)        ISSN: 0021-8820            Impact factor:   2.649


  16 in total

1.  Geosmin and 2-methylisoborneol from cyanobacteria in three water supply systems.

Authors:  G Izaguirre; C J Hwang; S W Krasner; M J McGuire
Journal:  Appl Environ Microbiol       Date:  1982-03       Impact factor: 4.792

2.  Plant terpenoid synthases: molecular biology and phylogenetic analysis.

Authors:  J Bohlmann; G Meyer-Gauen; R Croteau
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-14       Impact factor: 11.205

3.  Functional analysis of eubacterial ent-copalyl diphosphate synthase and pimara-9(11),15-diene synthase with unique primary sequences.

Authors:  Chiho Ikeda; Yutaka Hayashi; Nobuya Itoh; Haruo Seto; Tohru Dairi
Journal:  J Biochem       Date:  2006-12-05       Impact factor: 3.387

4.  Eubacterial diterpene cyclase genes essential for production of the isoprenoid antibiotic terpentecin.

Authors:  T Dairi; Y Hamano; T Kuzuyama; N Itoh; K Furihata; H Seto
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

5.  Geosmin biosynthesis in Streptomyces avermitilis. Molecular cloning, expression, and mechanistic study of the germacradienol/geosmin synthase.

Authors:  David E Cane; Xiaofei He; Seiji Kobayashi; Satoshi Omura; Haruo Ikeda
Journal:  J Antibiot (Tokyo)       Date:  2006-08       Impact factor: 2.649

6.  Genome-minimized Streptomyces host for the heterologous expression of secondary metabolism.

Authors:  Mamoru Komatsu; Takuma Uchiyama; Satoshi Omura; David E Cane; Haruo Ikeda
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-25       Impact factor: 11.205

7.  Biosynthesis of volatiles by the myxobacterium Myxococcus xanthus.

Authors:  Jeroen S Dickschat; Silke C Wenzel; Helge B Bode; Rolf Müller; Stefan Schulz
Journal:  Chembiochem       Date:  2004-06-07       Impact factor: 3.164

8.  Identification and functional analysis of genes controlling biosynthesis of 2-methylisoborneol.

Authors:  Mamoru Komatsu; Muneya Tsuda; Satoshi Omura; Hideaki Oikawa; Haruo Ikeda
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-20       Impact factor: 11.205

9.  Biosynthesis of mercapturic acid derivative of the labdane-type diterpene, cyslabdan that potentiates imipenem activity against methicillin-resistant Staphylococcus aureus: cyslabdan is generated by mycothiol-mediated xenobiotic detoxification.

Authors:  Haruo Ikeda; Kazuo Shin-Ya; Tohru Nagamitsu; Hiroshi Tomoda
Journal:  J Ind Microbiol Biotechnol       Date:  2015-10-27       Impact factor: 3.346

10.  Biosynthetic potential-based strain prioritization for natural product discovery: a showcase for diterpenoid-producing actinomycetes.

Authors:  Pengfei Xie; Ming Ma; Mostafa E Rateb; Khaled A Shaaban; Zhiguo Yu; Sheng-Xiong Huang; Li-Xing Zhao; Xiangcheng Zhu; Yijun Yan; Ryan M Peterson; Jeremy R Lohman; Dong Yang; Min Yin; Jeffrey D Rudolf; Yi Jiang; Yanwen Duan; Ben Shen
Journal:  J Nat Prod       Date:  2014-01-31       Impact factor: 4.050

View more
  5 in total

1.  Combinatorial biosynthesis and the basis for substrate promiscuity in class I diterpene synthases.

Authors:  Meirong Jia; Sambit K Mishra; Samuel Tufts; Robert L Jernigan; Reuben J Peters
Journal:  Metab Eng       Date:  2019-06-17       Impact factor: 9.783

2.  Discovery of the Tiancilactone Antibiotics by Genome Mining of Atypical Bacterial Type II Diterpene Synthases.

Authors:  Liao-Bin Dong; Jeffrey D Rudolf; Ming-Rong Deng; Xiaohui Yan; Ben Shen
Journal:  Chembiochem       Date:  2018-05-27       Impact factor: 3.164

Review 3.  Platensimycin and platencin: Inspirations for chemistry, biology, enzymology, and medicine.

Authors:  Jeffrey D Rudolf; Liao-Bin Dong; Ben Shen
Journal:  Biochem Pharmacol       Date:  2016-11-16       Impact factor: 5.858

4.  A database-driven approach identifies additional diterpene synthase activities in the mint family (Lamiaceae).

Authors:  Sean R Johnson; Wajid Waheed Bhat; Jacob Bibik; Aiko Turmo; Britta Hamberger; Björn Hamberger
Journal:  J Biol Chem       Date:  2018-11-29       Impact factor: 5.157

5.  Streptomyces clavuligerus: The Omics Era.

Authors:  Paloma Liras; Juan F Martín
Journal:  J Ind Microbiol Biotechnol       Date:  2021-12-23       Impact factor: 4.258

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.