Literature DB >> 26814130

The Tumor-suppressive Small GTPase DiRas1 Binds the Noncanonical Guanine Nucleotide Exchange Factor SmgGDS and Antagonizes SmgGDS Interactions with Oncogenic Small GTPases.

Carmen Bergom1, Andrew D Hauser2, Amy Rymaszewski3, Patrick Gonyo3, Jeremy W Prokop4, Benjamin C Jennings5, Alexis J Lawton6, Anne Frei7, Ellen L Lorimer3, Irene Aguilera-Barrantes8, Alexander C Mackinnon9, Kathleen Noon10, Carol A Fierke11, Carol L Williams3.   

Abstract

The small GTPase DiRas1 has tumor-suppressive activities, unlike the oncogenic properties more common to small GTPases such as K-Ras and RhoA. Although DiRas1 has been found to be a tumor suppressor in gliomas and esophageal squamous cell carcinomas, the mechanisms by which it inhibits malignant phenotypes have not been fully determined. In this study, we demonstrate that DiRas1 binds to SmgGDS, a protein that promotes the activation of several oncogenic GTPases. In silico docking studies predict that DiRas1 binds to SmgGDS in a manner similar to other small GTPases. SmgGDS is a guanine nucleotide exchange factor for RhoA, but we report here that SmgGDS does not mediate GDP/GTP exchange on DiRas1. Intriguingly, DiRas1 acts similarly to a dominant-negative small GTPase, binding to SmgGDS and inhibiting SmgGDS binding to other small GTPases, including K-Ras4B, RhoA, and Rap1A. DiRas1 is expressed in normal breast tissue, but its expression is decreased in most breast cancers, similar to its family member DiRas3 (ARHI). DiRas1 inhibits RhoA- and SmgGDS-mediated NF-κB transcriptional activity in HEK293T cells. We also report that DiRas1 suppresses basal NF-κB activation in breast cancer and glioblastoma cell lines. Taken together, our data support a model in which DiRas1 expression inhibits malignant features of cancers in part by nonproductively binding to SmgGDS and inhibiting the binding of other small GTPases to SmgGDS.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Di-Ras1; GTPase Kras (KRAS); NF-kappaB (NF-KB); Rap1GDS1; Ras homolog gene family, member A (RhoA); Ras-related protein 1 (Rap1); Rig; SmgGDS; breast cancer; glioblastoma

Mesh:

Substances:

Year:  2016        PMID: 26814130      PMCID: PMC4813585          DOI: 10.1074/jbc.M115.696831

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  39 in total

1.  Increasing the precision of comparative models with YASARA NOVA--a self-parameterizing force field.

Authors:  Elmar Krieger; Günther Koraimann; Gert Vriend
Journal:  Proteins       Date:  2002-05-15

2.  Di-Ras, a distinct subgroup of ras family GTPases with unique biochemical properties.

Authors:  Kenji Kontani; Minoru Tada; Tomohiro Ogawa; Takuro Okai; Kota Saito; Yasuhiro Araki; Toshiaki Katada
Journal:  J Biol Chem       Date:  2002-08-22       Impact factor: 5.157

3.  A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations.

Authors:  Yong Duan; Chun Wu; Shibasish Chowdhury; Mathew C Lee; Guoming Xiong; Wei Zhang; Rong Yang; Piotr Cieplak; Ray Luo; Taisung Lee; James Caldwell; Junmei Wang; Peter Kollman
Journal:  J Comput Chem       Date:  2003-12       Impact factor: 3.376

4.  Multiple signalling pathways lead to the activation of the nuclear factor kappaB by the Rho family of GTPases.

Authors:  S Montaner; R Perona; L Saniger; J C Lacal
Journal:  J Biol Chem       Date:  1998-05-22       Impact factor: 5.157

5.  Downregulation of the novel tumor suppressor DIRAS1 predicts poor prognosis in esophageal squamous cell carcinoma.

Authors:  Ying-Hui Zhu; Li Fu; Leilei Chen; Yan-Ru Qin; Haibo Liu; Fajun Xie; Tingting Zeng; Sui-Sui Dong; Jiangchao Li; Yan Li; Yongdong Dai; Dan Xie; Xin-Yuan Guan
Journal:  Cancer Res       Date:  2013-02-22       Impact factor: 12.701

6.  GTPase activity of Di-Ras proteins is stimulated by Rap1GAP proteins.

Authors:  Raphael Gasper; Begoña Sot; Alfred Wittinghofer
Journal:  Small GTPases       Date:  2010-11

7.  The role of Rac1 in the regulation of NF-κB activity, cell proliferation, and cell migration in non-small cell lung carcinoma.

Authors:  Adam Gastonguay; Tracy Berg; Andrew D Hauser; Nathan Schuld; Ellen Lorimer; Carol L Williams
Journal:  Cancer Biol Ther       Date:  2012-06-01       Impact factor: 4.742

8.  NF-κB activity is downregulated by KRAS knockdown in SW620 cells via the RAS-ERK-IκBα pathway.

Authors:  Gen Lin; Zhiwei Tang; Yun-Bin Ye; Qiang Chen
Journal:  Oncol Rep       Date:  2012-02-02       Impact factor: 3.906

9.  Dominant inhibitory mutations in the Mg(2+)-binding site of RasH prevent its activation by GTP.

Authors:  C L Farnsworth; L A Feig
Journal:  Mol Cell Biol       Date:  1991-10       Impact factor: 4.272

10.  AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility.

Authors:  Garrett M Morris; Ruth Huey; William Lindstrom; Michel F Sanner; Richard K Belew; David S Goodsell; Arthur J Olson
Journal:  J Comput Chem       Date:  2009-12       Impact factor: 3.376

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  13 in total

1.  Structure-based analysis of the guanine nucleotide exchange factor SmgGDS reveals armadillo-repeat motifs and key regions for activity and GTPase binding.

Authors:  Hikaru Shimizu; Sachiko Toma-Fukai; Shinya Saijo; Nobutaka Shimizu; Kenji Kontani; Toshiaki Katada; Toshiyuki Shimizu
Journal:  J Biol Chem       Date:  2017-06-19       Impact factor: 5.157

2.  The chaperone SmgGDS-607 has a dual role, both activating and inhibiting farnesylation of small GTPases.

Authors:  Desirée García-Torres; Carol A Fierke
Journal:  J Biol Chem       Date:  2019-06-13       Impact factor: 5.157

3.  GEF mechanism revealed by the structure of SmgGDS-558 and farnesylated RhoA complex and its implication for a chaperone mechanism.

Authors:  Hikaru Shimizu; Sachiko Toma-Fukai; Kenji Kontani; Toshiaki Katada; Toshiyuki Shimizu
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-06       Impact factor: 11.205

4.  RAS-related GTPases DIRAS1 and DIRAS2 induce autophagic cancer cell death and are required for autophagy in murine ovarian cancer cells.

Authors:  Margie N Sutton; Hailing Yang; Gilbert Y Huang; Caroline Fu; Michael Pontikos; Yan Wang; Weiqun Mao; Lan Pang; Maojie Yang; Jinsong Liu; Jan Parker-Thornburg; Zhen Lu; Robert C Bast
Journal:  Autophagy       Date:  2018-03-21       Impact factor: 16.016

5.  Generalized myoclonic epilepsy with photosensitivity in juvenile dogs caused by a defective DIRAS family GTPase 1.

Authors:  Franziska Wielaender; Riika Sarviaho; Fiona James; Marjo K Hytönen; Miguel A Cortez; Gerhard Kluger; Lotta L E Koskinen; Meharji Arumilli; Marion Kornberg; Andrea Bathen-Noethen; Andrea Tipold; Kai Rentmeister; Sofie F M Bhatti; Velia Hülsmeyer; Irene C Boettcher; Carina Tästensen; Thomas Flegel; Elisabeth Dietschi; Tosso Leeb; Kaspar Matiasek; Andrea Fischer; Hannes Lohi
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-21       Impact factor: 11.205

6.  Sodium butyrate induces cell death by autophagy and reactivates a tumor suppressor gene DIRAS1 in renal cell carcinoma cell line UOK146.

Authors:  Shiv Prakash Verma; Ayushi Agarwal; Parimal Das
Journal:  In Vitro Cell Dev Biol Anim       Date:  2018-03-19       Impact factor: 2.416

7.  Methylation of DIRAS1 promotes colorectal cancer progression and may serve as a marker for poor prognosis.

Authors:  Ruipan Zheng; Dan Gao; Tao He; Meiying Zhang; Xiaomei Zhang; Enqiang Linghu; Lixin Wei; Mingzhou Guo
Journal:  Clin Epigenetics       Date:  2017-05-10       Impact factor: 6.551

Review 8.  Structural Insights into the Regulation Mechanism of Small GTPases by GEFs.

Authors:  Sachiko Toma-Fukai; Toshiyuki Shimizu
Journal:  Molecules       Date:  2019-09-11       Impact factor: 4.411

Review 9.  SmgGDS: An Emerging Master Regulator of Prenylation and Trafficking by Small GTPases in the Ras and Rho Families.

Authors:  Anthony C Brandt; Olivia J Koehn; Carol L Williams
Journal:  Front Mol Biosci       Date:  2021-06-16

10.  RNAa and Vector-Mediated Overexpression of DIRAS1 Suppresses Tumor Growth and Migration in Renal Cell Carcinoma.

Authors:  Xin Xu; Jiangfeng Li; Song Wang; Xiangyi Zheng; Liping Xie
Journal:  Mol Ther Nucleic Acids       Date:  2018-08-08       Impact factor: 8.886

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