Literature DB >> 26812956

Marinobacterium aestuariivivens sp. nov., isolated from a tidal flat.

Sooyeon Park1, Yong-Taek Jung1,2, Sona Kim1, Jung-Hoon Yoon1.   

Abstract

A Gram-stain-negative, motile, aerobic, rod- or ovoid-shaped bacterium, designated DB-1T, was isolated from a tidal flat on the Yellow Sea in South Korea and subjected to a taxonomic study using a polyphasic approach. Strain DB-1T grew optimally at 30 °C, at pH 7.0-8.0 and in the presence of 0.5-2.0% (w/v) NaCl. The neighbour-joining phylogenetic tree based on 16S rRNA gene sequences revealed that strain DB-1T falls within the clade comprising species of the genus Marinobacterium, clustering coherently with the type strain of Marinobacterium nitratireducens and showing a sequence similarity value of 98.4 %. The novel strain exhibited 16S rRNA gene sequence similarities of 91.5-94.4 % to the type strains of other species of the genus Marinobacterium. Strain DB-1T contained Q-8 as the predominant ubiquinone and C18:1ω7c, summed feature 3 (C16:1ω7c and/or C16:1ω6c) and C16:0 as the major fatty acids. The major polar lipids detected in strain DB-1T were phosphatidylethanolamine, phosphatidylglycerol, one unidentified aminolipid, one unidentified glycolipid, one unidentified phospholipid and two unidentified lipids. The DNA G+C content of strain DB-1T was 62.3 mol% and the mean DNA-DNA relatedness value with the type strain of M. nitratireducens was 21±4.6%. Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, revealed that strain DB-1T is separated from recognized species of the genus Marinobacterium. On the basis of the data presented, strain DB-1T is considered to represent a novel species of the genus Marinobacterium, for which the name Marinobacterium aestuariivivens sp. nov. is proposed. The type strain is DB-1T (=KCTC 42778T=NBRC 111756T).

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Year:  2016        PMID: 26812956     DOI: 10.1099/ijsem.0.000927

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Marinobacterium arenosum sp. nov., isolated from a coastal sand.

Authors:  Yunjeong Lee; Veeraya Weerawongwiwat; Jong-Hwa Kim; Jung-Hoon Yoon; Jung-Sook Lee; Ampaitip Sukhoom; Wonyong Kim
Journal:  Arch Microbiol       Date:  2022-04-22       Impact factor: 2.552

2.  Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica.

Authors:  Dong Han Choi; Gwang Ii Jang; Alla Lapidus; Alex Copeland; T B K Reddy; Supratim Mukherjee; Marcel Huntemann; Neha Varghese; Natalia Ivanova; Manoj Pillay; Brian J Tindall; Markus Göker; Tanja Woyke; Hans-Peter Klenk; Nikos C Kyrpides; Byung Cheol Cho
Journal:  Stand Genomic Sci       Date:  2017-10-30

3.  Complete Genome Sequence of Marinobacterium sp. Strain LSUCC0821, Isolated from the Coastal Gulf of Mexico.

Authors:  Anna M Lucchesi; Michael W Henson; Ben Temperton; J Cameron Thrash
Journal:  Microbiol Resour Announc       Date:  2020-12-03
  3 in total

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