Literature DB >> 26812493

Insights from Theory and Experiment on the Photochromic spiro-Dihydropyrrolo-Pyridazine/Betaine System.

Amendra Fernando1, Tej B Shrestha1,2, Yao Liu3, Aruni P Malalasekera1, Jing Yu1, Emily J McLaurin1, Claudia Turro3, Stefan H Bossmann1, Christine M Aikens1.   

Abstract

We elucidated the photochromic spiro-4a,5-dihydropyrrolo[1,2-b]pyridazine/betaine (DPP/betaine) system by comparing state-of-the-art density functional theory calculations with nanosecond/millisecond UV-vis absorption spectroscopy, as well as steady-state absorption and cyclization kinetics. Time-dependent density functional theory calculations are employed to examine the transformations occurring after photoexcitation. This study shows that the photochromic spiro-4a,5-dihydropyrrolo[1,2-b]pyridazine and spiro-1,8a-dihydroindolizine (DHI) systems react according to similar pathways. However, notable differences exist. Although photoexcitation of the spiro-DPP system also leads to cis-betaines, which then isomerize to trans-betaines, we found two distinct classes of cis isomers (cis-betaine rotamer-1 and cis-betaine rotamer-2), which do not exist in spiro-1,8a-dihydroindolizine. Similar to our previous study on the spiro-DHI/betaine system, a complicated potential-energy landscape between cis and trans isomers exists in the spiro-DPP system, consisting of a network of transition states and intermediates. Because the spiro-DPP/betaine is even more complicated than the spiro-DHI/betaine system, (substituted) photochromic systems featuring a 4a,5-dihydropyrrolo[1,2-b]pyridazine functional unit will require thorough in silico design to function properly as logical gates or in devices for information storage.

Entities:  

Year:  2016        PMID: 26812493     DOI: 10.1021/acs.jpca.5b10020

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  2 in total

Review 1.  Ultrafast dynamics-driven biomolecular recognition where fast activities dictate slow events.

Authors:  Priya Singh; Damayanti Bagchi; Samir Kumar Pal
Journal:  J Biosci       Date:  2018-07       Impact factor: 1.826

2.  Allosteric Inhibitory Molecular Recognition of a Photochromic Dye by a Digestive Enzyme: Dihydroindolizine makes α-chymotrypsin Photo-responsive.

Authors:  Damayanti Bagchi; Abhijit Ghosh; Priya Singh; Shreyasi Dutta; Nabarun Polley; Ismail I Althagafi; Rabab S Jassas; Saleh A Ahmed; Samir Kumar Pal
Journal:  Sci Rep       Date:  2016-09-28       Impact factor: 4.379

  2 in total

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