Literature DB >> 26804164

Epigenomic regulation of oncogenesis by chromatin remodeling.

R Kumar1,2, D-Q Li3,4,5, S Müller6,7, S Knapp6,7.   

Abstract

Disruption of the intricate gene expression program represents one of major driving factors for the development, progression and maintenance of human cancer, and is often associated with acquired therapeutic resistance. At the molecular level, cancerous phenotypes are the outcome of cellular functions of critical genes, regulatory interactions of histones and chromatin remodeling complexes in response to dynamic and persistent upstream signals. A large body of genetic and biochemical evidence suggests that the chromatin remodelers integrate the extracellular and cytoplasmic signals to control gene activity. Consequently, widespread dysregulation of chromatin remodelers and the resulting inappropriate expression of regulatory genes, together, lead to oncogenesis. We summarize the recent developments and current state of the dysregulation of the chromatin remodeling components as the driving mechanism underlying the growth and progression of human tumors. Because chromatin remodelers, modifying enzymes and protein-protein interactions participate in interpreting the epigenetic code, selective chromatin remodelers and bromodomains have emerged as new frontiers for pharmacological intervention to develop future anti-cancer strategies to be used either as single-agent or in combination therapies with chemotherapeutics or radiotherapy.

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Year:  2016        PMID: 26804164     DOI: 10.1038/onc.2015.513

Source DB:  PubMed          Journal:  Oncogene        ISSN: 0950-9232            Impact factor:   9.867


  298 in total

1.  The chromatin remodeling gene ARID1A is a new prognostic marker in clear cell renal cell carcinoma.

Authors:  Zsuzsanna Lichner; Andreas Scorilas; Nicole M A White; Andrew H Girgis; Lora Rotstein; Kimberly C Wiegand; Ashraf Latif; Christina Chow; David Huntsman; George M Yousef
Journal:  Am J Pathol       Date:  2013-02-12       Impact factor: 4.307

2.  Rsf-1/HBXAP overexpression is independent of gene amplification and is associated with poor outcome in patients with urinary bladder urothelial carcinoma.

Authors:  Peir-In Liang; Li-Ching Wu; Jim Jinn-Chyuan Sheu; Ting-Feng Wu; Kun-Hung Shen; Yu-Hui Wang; Wen-Ren Wu; Yow-Ling Shiue; Hsuan-Ying Huang; Han-Ping Hsu; Yi-Hsien Chen; Li-Tzon Chen; Chien-Feng Li; Alex C Liao
Journal:  J Clin Pathol       Date:  2012-06-09       Impact factor: 3.411

3.  A role for BAF57 in cell cycle-dependent transcriptional regulation by the SWI/SNF chromatin remodeling complex.

Authors:  Nasun Hah; Annemieke Kolkman; Donald D Ruhl; W W M Pim Pijnappel; Albert J R Heck; H Th Marc Timmers; W Lee Kraus
Journal:  Cancer Res       Date:  2010-05-11       Impact factor: 12.701

4.  Rsf-1 overexpression correlates with poor prognosis and cell proliferation in colon cancer.

Authors:  Shuli Liu; Qianze Dong; Enhua Wang
Journal:  Tumour Biol       Date:  2012-04-20

5.  Overexpression of metastatic tumor antigen 1 in hepatocellular carcinoma: Relationship to vascular invasion and estrogen receptor-alpha.

Authors:  Woo Sung Moon; Kenneth Chang; Andrzej S Tarnawski
Journal:  Hum Pathol       Date:  2004-04       Impact factor: 3.466

6.  A core chromatin remodeling factor instructs global chromatin signaling through multivalent reading of nucleosome codes.

Authors:  Sujit S Nair; Da-Qiang Li; Rakesh Kumar
Journal:  Mol Cell       Date:  2013-01-24       Impact factor: 17.970

7.  SNF5 reexpression in malignant rhabdoid tumors regulates transcription of target genes by recruitment of SWI/SNF complexes and RNAPII to the transcription start site of their promoters.

Authors:  Yasumichi Kuwahara; Darmood Wei; Joel Durand; Bernard E Weissman
Journal:  Mol Cancer Res       Date:  2013-01-30       Impact factor: 5.852

8.  Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy.

Authors:  Cigall Kadoch; Diana C Hargreaves; Courtney Hodges; Laura Elias; Lena Ho; Jeff Ranish; Gerald R Crabtree
Journal:  Nat Genet       Date:  2013-05-05       Impact factor: 38.330

9.  Druggability analysis and structural classification of bromodomain acetyl-lysine binding sites.

Authors:  Lewis R Vidler; Nathan Brown; Stefan Knapp; Swen Hoelder
Journal:  J Med Chem       Date:  2012-07-12       Impact factor: 7.446

10.  LP99: Discovery and Synthesis of the First Selective BRD7/9 Bromodomain Inhibitor.

Authors:  Peter G K Clark; Lucas C C Vieira; Cynthia Tallant; Oleg Fedorov; Dean C Singleton; Catherine M Rogers; Octovia P Monteiro; James M Bennett; Roberta Baronio; Susanne Müller; Danette L Daniels; Jacqui Méndez; Stefan Knapp; Paul E Brennan; Darren J Dixon
Journal:  Angew Chem Int Ed Engl       Date:  2015-04-13       Impact factor: 15.336

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  39 in total

Review 1.  Targeting the epigenome in malignant pleural mesothelioma.

Authors:  Kaitlin C McLoughlin; Andrew S Kaufman; David S Schrump
Journal:  Transl Lung Cancer Res       Date:  2017-06

Review 2.  Signaling coupled epigenomic regulation of gene expression.

Authors:  R Kumar; S Deivendran; T R Santhoshkumar; M R Pillai
Journal:  Oncogene       Date:  2017-06-26       Impact factor: 9.867

3.  First-in-Class Inhibitors of Oncogenic CHD1L with Preclinical Activity against Colorectal Cancer.

Authors:  Joshua M Abbott; Qiong Zhou; Hector Esquer; Laura Pike; Travis P Broneske; Sébastien Rinaldetti; Adedoyin D Abraham; Dominique A Ramirez; Paul J Lunghofer; Todd M Pitts; Daniel P Regan; Aik Choon Tan; Daniel L Gustafson; Wells A Messersmith; Daniel V LaBarbera
Journal:  Mol Cancer Ther       Date:  2020-06-04       Impact factor: 6.261

Review 4.  Redox biology and the interface between bioenergetics, autophagy and circadian control of metabolism.

Authors:  Adam R Wende; Martin E Young; John Chatham; Jianhua Zhang; Namakkal S Rajasekaran; Victor M Darley-Usmar
Journal:  Free Radic Biol Med       Date:  2016-05-27       Impact factor: 7.376

5.  Remodeling super-enhancers and oncogenic transcription.

Authors:  Li Wang; Guang Hu
Journal:  Cell Cycle       Date:  2016-08-11       Impact factor: 4.534

Review 6.  The Latest Twists in Chromatin Remodeling.

Authors:  Ralf Blossey; Helmut Schiessel
Journal:  Biophys J       Date:  2018-01-06       Impact factor: 4.033

Review 7.  BET proteins in abnormal metabolism, inflammation, and the breast cancer microenvironment.

Authors:  Guillaume P Andrieu; Jordan S Shafran; Jude T Deeney; Kishan R Bharadwaj; Annapoorni Rangarajan; Gerald V Denis
Journal:  J Leukoc Biol       Date:  2018-03-01       Impact factor: 4.962

8.  Prognostic significance of epigenetic regulatory gene expression in patients with non-small-cell lung cancer.

Authors:  Zegui Tu; Xiancheng Chen; Tian Tian; Guo Chen; Meijuan Huang
Journal:  Aging (Albany NY)       Date:  2021-02-26       Impact factor: 5.682

Review 9.  Nuclear organization mediates cancer-compromised genetic and epigenetic control.

Authors:  Sayyed K Zaidi; Andrew J Fritz; Kirsten M Tracy; Jonathan A Gordon; Coralee E Tye; Joseph Boyd; Andre J Van Wijnen; Jeffrey A Nickerson; Antony N Imbalzano; Jane B Lian; Janet L Stein; Gary S Stein
Journal:  Adv Biol Regul       Date:  2018-05-09

Review 10.  Current and emerging therapies for PNETs in patients with or without MEN1.

Authors:  Morten Frost; Kate E Lines; Rajesh V Thakker
Journal:  Nat Rev Endocrinol       Date:  2018-02-16       Impact factor: 43.330

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