Literature DB >> 26799454

Regulating infidelity: RNA-mediated recruitment of AID to DNA during class switch recombination.

Lauren J DiMenna1, Jayanta Chaudhuri2.   

Abstract

The mechanism by which the DNA deaminase activation-induced cytidine deaminase (AID) is specifically recruited to repetitive switch region DNA during class switch recombination is still poorly understood. Work over the past decade has revealed a strong link between transcription and RNA polymerase-associated factors in AID recruitment, yet none of these processes satisfactorily explain how AID specificity is affected. Here, we review a recent finding wherein AID is guided to switch regions not by a protein factor but by an RNA moiety, and especially one associated with a noncoding RNA that has been long thought of as being inert. This work explains the long-standing requirement of splicing of noncoding transcripts during class switching, and has implications in both B cell-mediated immunity as well as the underlying pathological syndromes associated with the recombination reaction.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  AID; Class switch recombination; Immunoglobulin; Noncoding/intronic RNA; Switch region

Mesh:

Substances:

Year:  2016        PMID: 26799454      PMCID: PMC5373104          DOI: 10.1002/eji.201545809

Source DB:  PubMed          Journal:  Eur J Immunol        ISSN: 0014-2980            Impact factor:   5.532


  83 in total

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Authors:  M Tian; F W Alt
Journal:  J Biol Chem       Date:  2000-08-04       Impact factor: 5.157

2.  Cutting edge: DGYW/WRCH is a better predictor of mutability at G:C bases in Ig hypermutation than the widely accepted RGYW/WRCY motif and probably reflects a two-step activation-induced cytidine deaminase-triggered process.

Authors:  Igor B Rogozin; Marilyn Diaz
Journal:  J Immunol       Date:  2004-03-15       Impact factor: 5.422

3.  Generation of switch hybrid DNA between Ig heavy chain-mu and downstream switch regions in B lymphocytes.

Authors:  J R Müller; T Giese; D L Henry; J F Mushinski; K B Marcu
Journal:  J Immunol       Date:  1998-08-01       Impact factor: 5.422

Review 4.  V(D)J recombination: mechanisms of initiation.

Authors:  David G Schatz; Patrick C Swanson
Journal:  Annu Rev Genet       Date:  2011-08-19       Impact factor: 16.830

5.  The influence of transcriptional orientation on endogenous switch region function.

Authors:  Reiko Shinkura; Ming Tian; Michele Smith; Katrin Chua; Yuko Fujiwara; Frederick W Alt
Journal:  Nat Immunol       Date:  2003-05       Impact factor: 25.606

6.  Somatic mutations of the immunoglobulin framework are generally required for broad and potent HIV-1 neutralization.

Authors:  Florian Klein; Ron Diskin; Johannes F Scheid; Christian Gaebler; Hugo Mouquet; Ivelin S Georgiev; Marie Pancera; Tongqing Zhou; Reha-Baris Incesu; Brooks Zhongzheng Fu; Priyanthi N P Gnanapragasam; Thiago Y Oliveira; Michael S Seaman; Peter D Kwong; Pamela J Bjorkman; Michel C Nussenzweig
Journal:  Cell       Date:  2013-03-28       Impact factor: 41.582

7.  Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena.

Authors:  Kazufumi Mochizuki; Noah A Fine; Toshitaka Fujisawa; Martin A Gorovsky
Journal:  Cell       Date:  2002-09-20       Impact factor: 41.582

8.  Transcription-targeted DNA deamination by the AID antibody diversification enzyme.

Authors:  Jayanta Chaudhuri; Ming Tian; Chan Khuong; Katrin Chua; Eric Pinaud; Frederick W Alt
Journal:  Nature       Date:  2003-04-09       Impact factor: 49.962

9.  Activation-induced cytidine deaminase (AID) deficiency causes the autosomal recessive form of the Hyper-IgM syndrome (HIGM2).

Authors:  P Revy; T Muto; Y Levy; F Geissmann; A Plebani; O Sanal; N Catalan; M Forveille; R Dufourcq-Labelouse; A Gennery; I Tezcan; F Ersoy; H Kayserili; A G Ugazio; N Brousse; M Muramatsu; L D Notarangelo; K Kinoshita; T Honjo; A Fischer; A Durandy
Journal:  Cell       Date:  2000-09-01       Impact factor: 41.582

10.  Convergent transcription at intragenic super-enhancers targets AID-initiated genomic instability.

Authors:  Fei-Long Meng; Zhou Du; Alexander Federation; Jiazhi Hu; Qiao Wang; Kyong-Rim Kieffer-Kwon; Robin M Meyers; Corina Amor; Caitlyn R Wasserman; Donna Neuberg; Rafael Casellas; Michel C Nussenzweig; James E Bradner; X Shirley Liu; Frederick W Alt
Journal:  Cell       Date:  2014-12-04       Impact factor: 41.582

View more
  3 in total

Review 1.  Diversity of Immunoglobulin (Ig) Isotypes and the Role of Activation-Induced Cytidine Deaminase (AID) in Fish.

Authors:  Bhakti Patel; Rajanya Banerjee; Mrinal Samanta; Surajit Das
Journal:  Mol Biotechnol       Date:  2018-06       Impact factor: 2.695

Review 2.  The Relevance of G-Quadruplexes for DNA Repair.

Authors:  Rebecca Linke; Michaela Limmer; Stefan A Juranek; Annkristin Heine; Katrin Paeschke
Journal:  Int J Mol Sci       Date:  2021-11-22       Impact factor: 5.923

Review 3.  Generating and repairing genetically programmed DNA breaks during immunoglobulin class switch recombination.

Authors:  Laura Nicolas; Montserrat Cols; Jee Eun Choi; Jayanta Chaudhuri; Bao Vuong
Journal:  F1000Res       Date:  2018-04-13
  3 in total

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