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Literature DB >> 26792736

An Evolutionary View of the Arms Race between Protein Kinase R and Large DNA Viruses.

Abstract

To establish productive infections, viruses must counteract numerous cellular defenses that are poised to recognize viruses as nonself and to activate antiviral pathways. The opposing goals of host and viral factors lead to evolutionary arms races that can be illuminated by evolutionary and computational methods and tested in experimental models. Here we illustrate how this perspective has been contributing to our understanding of the interactions of the protein kinase R pathway with large DNA viruses.

Entities: Gene

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Year: 2016 PMID： 26792736 PMCID： PMC4794663 DOI： 10.1128/JVI.01996-15

Source DB: PubMed Journal: J Virol ISSN： 0022-538X Impact factor: 5.103

34 in total

1. Essential role of protein kinase R antagonism by TRS1 in human cytomegalovirus replication.

Authors: Jacquelyn E Braggin; Stephanie J Child; Adam P Geballe
Journal: Virology Date: 2015-12-21 Impact factor: 3.616

2. Species specificity of protein kinase r antagonism by cytomegalovirus TRS1 genes.

Authors: Stephanie J Child; Greg Brennan; Jacquelyn E Braggin; Adam P Geballe
Journal: J Virol Date: 2012-01-25 Impact factor: 5.103

3. Experimental Evolution Identifies Vaccinia Virus Mutations in A24R and A35R That Antagonize the Protein Kinase R Pathway and Accompany Collapse of an Extragenic Gene Amplification.

Authors: Greg Brennan; Jacob O Kitzman; Jay Shendure; Adam P Geballe
Journal: J Virol Date: 2015-07-22 Impact factor: 5.103

4. Induction of protein kinase PKR-dependent activation of interferon regulatory factor 3 by vaccinia virus occurs through adapter IPS-1 signaling.

Authors: Ping Zhang; Charles E Samuel
Journal: J Biol Chem Date: 2008-10-15 Impact factor: 5.157

5. Broadly targeted human cytomegalovirus-specific CD4+ and CD8+ T cells dominate the memory compartments of exposed subjects.

Authors: Andrew W Sylwester; Bridget L Mitchell; John B Edgar; Cara Taormina; Christian Pelte; Franziska Ruchti; Paul R Sleath; Kenneth H Grabstein; Nancy A Hosken; Florian Kern; Jay A Nelson; Louis J Picker
Journal: J Exp Med Date: 2005-09-05 Impact factor: 14.307

6. Great ape genetic diversity and population history.

Authors: Javier Prado-Martinez; Peter H Sudmant; Jeffrey M Kidd; Heng Li; Joanna L Kelley; Belen Lorente-Galdos; Krishna R Veeramah; August E Woerner; Timothy D O'Connor; Gabriel Santpere; Alexander Cagan; Christoph Theunert; Ferran Casals; Hafid Laayouni; Kasper Munch; Asger Hobolth; Anders E Halager; Maika Malig; Jessica Hernandez-Rodriguez; Irene Hernando-Herraez; Kay Prüfer; Marc Pybus; Laurel Johnstone; Michael Lachmann; Can Alkan; Dorina Twigg; Natalia Petit; Carl Baker; Fereydoun Hormozdiari; Marcos Fernandez-Callejo; Marc Dabad; Michael L Wilson; Laurie Stevison; Cristina Camprubí; Tiago Carvalho; Aurora Ruiz-Herrera; Laura Vives; Marta Mele; Teresa Abello; Ivanela Kondova; Ronald E Bontrop; Anne Pusey; Felix Lankester; John A Kiyang; Richard A Bergl; Elizabeth Lonsdorf; Simon Myers; Mario Ventura; Pascal Gagneux; David Comas; Hans Siegismund; Julie Blanc; Lidia Agueda-Calpena; Marta Gut; Lucinda Fulton; Sarah A Tishkoff; James C Mullikin; Richard K Wilson; Ivo G Gut; Mary Katherine Gonder; Oliver A Ryder; Beatrice H Hahn; Arcadi Navarro; Joshua M Akey; Jaume Bertranpetit; David Reich; Thomas Mailund; Mikkel H Schierup; Christina Hvilsom; Aida M Andrés; Jeffrey D Wall; Carlos D Bustamante; Michael F Hammer; Evan E Eichler; Tomas Marques-Bonet
Journal: Nature Date: 2013-07-03 Impact factor: 49.962

7. Protein kinase R reveals an evolutionary model for defeating viral mimicry.

Authors: Nels C Elde; Stephanie J Child; Adam P Geballe; Harmit S Malik
Journal: Nature Date: 2008-11-30 Impact factor: 49.962

8. Decoding human cytomegalovirus.

Authors: Noam Stern-Ginossar; Ben Weisburd; Annette Michalski; Vu Thuy Khanh Le; Marco Y Hein; Sheng-Xiong Huang; Ming Ma; Ben Shen; Shu-Bing Qian; Hartmut Hengel; Matthias Mann; Nicholas T Ingolia; Jonathan S Weissman
Journal: Science Date: 2012-11-23 Impact factor: 47.728

An Evolutionary View of the Arms Race between Protein Kinase R and Large DNA Viruses.

1. Essential role of protein kinase R antagonism by TRS1 in human cytomegalovirus replication.

2. Species specificity of protein kinase r antagonism by cytomegalovirus TRS1 genes.

3. Experimental Evolution Identifies Vaccinia Virus Mutations in A24R and A35R That Antagonize the Protein Kinase R Pathway and Accompany Collapse of an Extragenic Gene Amplification.

4. Induction of protein kinase PKR-dependent activation of interferon regulatory factor 3 by vaccinia virus occurs through adapter IPS-1 signaling.

5. Broadly targeted human cytomegalovirus-specific CD4+ and CD8+ T cells dominate the memory compartments of exposed subjects.

6. Great ape genetic diversity and population history.

7. Protein kinase R reveals an evolutionary model for defeating viral mimicry.

8. Decoding human cytomegalovirus.

9. Rapid evolution of protein kinase PKR alters sensitivity to viral inhibitors.

10. Adaptive gene amplification as an intermediate step in the expansion of virus host range.

Review 1. Species-Specific Host-Virus Interactions: Implications for Viral Host Range and Virulence.

2. Lineage-specific protein repeat expansions and contractions reveal malleable regions of immune genes.

3. Adenovirus prevents dsRNA formation by promoting efficient splicing of viral RNA.

Review 4. Does the Zinc Finger Antiviral Protein (ZAP) Shape the Evolution of Herpesvirus Genomes?