Literature DB >> 26790415

Proteomics analysis of global regulatory cascades involved in clavulanic acid production and morphological development in Streptomyces clavuligerus.

Nicole L Ferguson1, Lourdes Peña-Castillo1,2, Marcus A Moore1, Dawn R D Bignell1, Kapil Tahlan3.   

Abstract

The genus Streptomyces comprises bacteria that undergo a complex developmental life cycle and produce many metabolites of importance to industry and medicine. Streptomyces clavuligerus produces the β-lactamase inhibitor clavulanic acid, which is used in combination with β-lactam antibiotics to treat certain β-lactam resistant bacterial infections. Many aspects of how clavulanic acid production is globally regulated in S. clavuligerus still remains unknown. We conducted comparative proteomics analysis using the wild type strain of S. clavuligerus and two mutants (ΔbldA and ΔbldG), which are defective in global regulators and vary in their ability to produce clavulanic acid. Approximately 33.5 % of the predicted S. clavuligerus proteome was detected and 192 known or putative regulatory proteins showed statistically differential expression levels in pairwise comparisons. Interestingly, the expression of many proteins whose corresponding genes contain TTA codons (predicted to require the bldA tRNA for translation) was unaffected in the bldA mutant.

Entities:  

Keywords:  Biosynthesis; Clavulanic acid; Proteomics; Regulation; Secondary metabolism; Streptomyces clavuligerus; iTRAQ

Mesh:

Substances:

Year:  2016        PMID: 26790415     DOI: 10.1007/s10295-016-1733-y

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  104 in total

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Authors:  Juan F Martín
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

Review 2.  Regulation of secondary metabolism in streptomycetes.

Authors:  Mervyn J Bibb
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Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

4.  A pathway-specific transcriptional activator regulates late steps of clavulanic acid biosynthesis in Streptomyces clavuligerus.

Authors:  A S Paradkar; K A Aidoo; S E Jensen
Journal:  Mol Microbiol       Date:  1998-02       Impact factor: 3.501

5.  Phage-mediated cloning of bldA, a region involved in Streptomyces coelicolor morphological development, and its analysis by genetic complementation.

Authors:  J M Piret; K F Chater
Journal:  J Bacteriol       Date:  1985-09       Impact factor: 3.490

6.  The vancomycin resistance VanRS two-component signal transduction system of Streptomyces coelicolor.

Authors:  Matthew I Hutchings; Hee-Jeon Hong; Mark J Buttner
Journal:  Mol Microbiol       Date:  2006-02       Impact factor: 3.501

Review 7.  Clavulanic acid biosynthesis and genetic manipulation for its overproduction.

Authors:  Ju Yeon Song; Susan E Jensen; Kye Joon Lee
Journal:  Appl Microbiol Biotechnol       Date:  2010-08-14       Impact factor: 4.813

8.  Genome-wide transcriptomic and proteomic analysis of the primary response to phosphate limitation in Streptomyces coelicolor M145 and in a DeltaphoP mutant.

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Journal:  Proteomics       Date:  2007-07       Impact factor: 3.984

9.  Genes essential for morphological development and antibiotic production in Streptomyces coelicolor are targets of BldD during vegetative growth.

Authors:  Chris D den Hengst; Ngat T Tran; Maureen J Bibb; Govind Chandra; Brenda K Leskiw; Mark J Buttner
Journal:  Mol Microbiol       Date:  2010-10       Impact factor: 3.501

10.  A sporulation-specific, sigF-dependent protein, SspA, affects septum positioning in Streptomyces coelicolor.

Authors:  Angelos Tzanis; Kate A Dalton; Andrew Hesketh; Chris D den Hengst; Mark J Buttner; Annabelle Thibessard; Gabriella H Kelemen
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Journal:  J Ind Microbiol Biotechnol       Date:  2020-08-10       Impact factor: 3.346

2.  An integrative-omics analysis of an industrial clavulanic acid-overproducing Streptomyces clavuligerus.

Authors:  Aslıhan Kurt-Kızıldoğan; Gözde Çelik; Eser Ünsaldı; Servet Özcan; Şerife Ayaz-Güner; Gülay Özcengiz
Journal:  Appl Microbiol Biotechnol       Date:  2022-08-10       Impact factor: 5.560

Review 3.  Recent advances in understanding Streptomyces.

Authors:  Keith F Chater
Journal:  F1000Res       Date:  2016-11-30

4.  Proteome-wide alterations in an industrial clavulanic acid producing strain of Streptomyces clavuligerus.

Authors:  Eser Ünsaldı; Aslıhan Kurt-Kızıldoğan; Birgit Voigt; Dörte Becher; Gülay Özcengiz
Journal:  Synth Syst Biotechnol       Date:  2016-11-06

5.  Comparative Transcriptome Analysis of Streptomyces Clavuligerus in Response to Favorable and Restrictive Nutritional Conditions.

Authors:  Laura Pinilla; León F Toro; Emma Laing; Juan Fernando Alzate; Rigoberto Ríos-Estepa
Journal:  Antibiotics (Basel)       Date:  2019-07-19

Review 6.  Clavulanic Acid Production by Streptomyces clavuligerus: Insights from Systems Biology, Strain Engineering, and Downstream Processing.

Authors:  Víctor A López-Agudelo; David Gómez-Ríos; Howard Ramirez-Malule
Journal:  Antibiotics (Basel)       Date:  2021-01-18

7.  Secondary Metabolite Transcriptomic Pipeline (SeMa-Trap), an expression-based exploration tool for increased secondary metabolite production in bacteria.

Authors:  Mehmet Direnç Mungan; Theresa Anisja Harbig; Naybel Hernandez Perez; Simone Edenhart; Evi Stegmann; Kay Nieselt; Nadine Ziemert
Journal:  Nucleic Acids Res       Date:  2022-05-17       Impact factor: 19.160

8.  Comparative Genomics and Metabolomics Analyses of Clavulanic Acid-Producing Streptomyces Species Provides Insight Into Specialized Metabolism.

Authors:  Nader F AbuSara; Brandon M Piercey; Marcus A Moore; Arshad Ali Shaikh; Louis-Félix Nothias; Santosh K Srivastava; Pablo Cruz-Morales; Pieter C Dorrestein; Francisco Barona-Gómez; Kapil Tahlan
Journal:  Front Microbiol       Date:  2019-11-08       Impact factor: 5.640

9.  Streptomyces clavuligerus: The Omics Era.

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Journal:  J Ind Microbiol Biotechnol       Date:  2021-12-23       Impact factor: 4.258

  9 in total

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