Literature DB >> 2678632

How do proteins recognize specific RNA sites? New clues from autogenously regulated ribosomal proteins.

D E Draper.   

Abstract

Some ribosomal proteins which bind specifically to ribosomal RNA also act as translational repressors and recognize their encoding messenger RNAs. The messenger- and ribosomal-RNA binding sites for four of these proteins are now well defined, and striking similarities in primary and secondary structure are apparent in most cases. These 'consensus' structures are useful clues to the features proteins use to recognize specific RNAs.

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Year:  1989        PMID: 2678632     DOI: 10.1016/0968-0004(89)90167-9

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  28 in total

1.  Crystal structure of ribosomal protein L4 shows RNA-binding sites for ribosome incorporation and feedback control of the S10 operon.

Authors:  M Worbs; R Huber; M C Wahl
Journal:  EMBO J       Date:  2000-03-01       Impact factor: 11.598

2.  RNA-structural mimicry in Escherichia coli ribosomal protein L4-dependent regulation of the S10 operon.

Authors:  Ulrich Stelzl; Janice M Zengel; Marina Tovbina; Marquis Walker; Knud H Nierhaus; Lasse Lindahl; Dinshaw J Patel
Journal:  J Biol Chem       Date:  2003-05-08       Impact factor: 5.157

3.  Role of the apical stem in maintaining the structure and function of adenovirus virus-associated RNA.

Authors:  K H Mellits; T Pe'ery; M B Mathews
Journal:  J Virol       Date:  1992-04       Impact factor: 5.103

4.  Nucleotide sequence of the rplJL operon and the deduced primary structure of the encoded L10 and L7/L12 proteins of Salmonella typhimurium compared to that of Escherichia coli.

Authors:  A N Zhyvoloup; M I Woodmaska; I V Kroupskaya; E B Paton
Journal:  Nucleic Acids Res       Date:  1990-08-11       Impact factor: 16.971

5.  The cyanelle genome of Cyanophora paradoxa, unlike the chloroplast genome, codes for the ribosomal L3 protein.

Authors:  J L Evrard; C Johnson; I Janssen; W Löffelhardt; J H Weil; M Kuntz
Journal:  Nucleic Acids Res       Date:  1990-03-11       Impact factor: 16.971

6.  The cyanelle S10 spc ribosomal protein gene operon from Cyanophora paradoxa.

Authors:  C B Michalowski; B Pfanzagl; W Löffelhardt; H J Bohnert
Journal:  Mol Gen Genet       Date:  1990-11

7.  A conserved sequence element in ribonuclease III processing signals is not required for accurate in vitro enzymatic cleavage.

Authors:  B S Chelladurai; H Li; A W Nicholson
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

8.  The binding site for ribosomal protein S8 in 16S rRNA and spc mRNA from Escherichia coli: minimum structural requirements and the effects of single bulged bases on S8-RNA interaction.

Authors:  H Wu; L Jiang; R A Zimmermann
Journal:  Nucleic Acids Res       Date:  1994-05-11       Impact factor: 16.971

9.  Crystal structure of the RNA binding ribosomal protein L1 from Thermus thermophilus.

Authors:  S Nikonov; N Nevskaya; I Eliseikina; N Fomenkova; A Nikulin; N Ossina; M Garber; B H Jonsson; C Briand; S Al-Karadaghi; A Svensson; A Aevarsson; A Liljas
Journal:  EMBO J       Date:  1996-03-15       Impact factor: 11.598

10.  An RNA structure involved in feedback regulation of splicing and of translation is critical for biological fitness.

Authors:  B Li; J Vilardell; J R Warner
Journal:  Proc Natl Acad Sci U S A       Date:  1996-02-20       Impact factor: 11.205

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