Literature DB >> 26785280

Tracking reaction dynamics in solution by pump-probe X-ray absorption spectroscopy and X-ray liquidography (solution scattering).

Jeongho Kim1, Kyung Hwan Kim2, Key Young Oang2, Jae Hyuk Lee3, Kiryong Hong4, Hana Cho5, Nils Huse6, Robert W Schoenlein3, Tae Kyu Kim4, Hyotcherl Ihee2.   

Abstract

Characterization of transient molecular structures formed during chemical and biological processes is essential for understanding their mechanisms and functions. Over the last decade, time-resolved X-ray liquidography (TRXL) and time-resolved X-ray absorption spectroscopy (TRXAS) have emerged as powerful techniques for molecular and electronic structural analysis of photoinduced reactions in the solution phase. Both techniques make use of a pump-probe scheme that consists of (1) an optical pump pulse to initiate a photoinduced process and (2) an X-ray probe pulse to monitor changes in the molecular structure as a function of time delay between pump and probe pulses. TRXL is sensitive to changes in the global molecular structure and therefore can be used to elucidate structural changes of reacting solute molecules as well as the collective response of solvent molecules. On the other hand, TRXAS can be used to probe changes in both local geometrical and electronic structures of specific X-ray-absorbing atoms due to the element-specific nature of core-level transitions. These techniques are complementary to each other and a combination of the two methods will enhance the capability of accurately obtaining structural changes induced by photoexcitation. Here we review the principles of TRXL and TRXAS and present recent application examples of the two methods for studying chemical and biological processes in solution. Furthermore, we briefly discuss the prospect of using X-ray free electron lasers for the two techniques, which will allow us to keep track of structural dynamics on femtosecond time scales in various solution-phase molecular reactions.

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Year:  2016        PMID: 26785280     DOI: 10.1039/c5cc08949b

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  7 in total

1.  Integrating solvation shell structure in experimentally driven molecular dynamics using x-ray solution scattering data.

Authors:  Darren J Hsu; Denis Leshchev; Irina Kosheleva; Kevin L Kohlstedt; Lin X Chen
Journal:  J Chem Phys       Date:  2020-05-29       Impact factor: 3.488

2.  Imaging ultrafast excited state pathways in transition metal complexes by X-ray transient absorption and scattering using X-ray free electron laser source.

Authors:  Lin X Chen; Megan L Shelby; Patrick J Lestrange; Nicholas E Jackson; Kristoffer Haldrup; Michael W Mara; Andrew B Stickrath; Diling Zhu; Henrik Lemke; Matthieu Chollet; Brian M Hoffman; Xiaosong Li
Journal:  Faraday Discuss       Date:  2016-12-16       Impact factor: 4.008

3.  Tracking the picosecond deactivation dynamics of a photoexcited iron carbene complex by time-resolved X-ray scattering.

Authors:  Denis Leshchev; Tobias C B Harlang; Lisa A Fredin; Dmitry Khakhulin; Yizhu Liu; Elisa Biasin; Mads G Laursen; Gemma E Newby; Kristoffer Haldrup; Martin M Nielsen; Kenneth Wärnmark; Villy Sundström; Petter Persson; Kasper S Kjær; Michael Wulff
Journal:  Chem Sci       Date:  2017-10-31       Impact factor: 9.825

4.  Unfolding bovine α-lactalbumin with T-jump: Characterizing disordered intermediates via time-resolved x-ray solution scattering and molecular dynamics simulations.

Authors:  Darren J Hsu; Denis Leshchev; Irina Kosheleva; Kevin L Kohlstedt; Lin X Chen
Journal:  J Chem Phys       Date:  2021-03-14       Impact factor: 3.488

Review 5.  Protein Structural Dynamics of Wild-Type and Mutant Homodimeric Hemoglobin Studied by Time-Resolved X-Ray Solution Scattering.

Authors:  Cheolhee Yang; Minseo Choi; Jong Goo Kim; Hanui Kim; Srinivasan Muniyappan; Shunsuke Nozawa; Shin-Ichi Adachi; Robert Henning; Irina Kosheleva; Hyotcherl Ihee
Journal:  Int J Mol Sci       Date:  2018-11-18       Impact factor: 5.923

6.  Solvent-dependent complex reaction pathways of bromoform revealed by time-resolved X-ray solution scattering and X-ray transient absorption spectroscopy.

Authors:  Qingyu Kong; Dmitry Khakhulin; Ilya A Shkrob; Jae Hyuk Lee; Xiaoyi Zhang; Jeongho Kim; Kyung Hwan Kim; Junbeom Jo; Jungmin Kim; Jaedong Kang; Van-Thai Pham; Guy Jennings; Charles Kurtz; Rick Spence; Lin X Chen; Michael Wulff; Hyotcherl Ihee
Journal:  Struct Dyn       Date:  2019-12-24       Impact factor: 2.920

7.  Towards Understanding Excited-State Properties of Organic Molecules Using Time-Resolved Soft X-ray Absorption Spectroscopy.

Authors:  Holger Stiel; Julia Braenzel; Adrian Jonas; Richard Gnewkow; Lisa Theresa Glöggler; Denny Sommer; Thomas Krist; Alexei Erko; Johannes Tümmler; Ioanna Mantouvalou
Journal:  Int J Mol Sci       Date:  2021-12-15       Impact factor: 5.923

  7 in total

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